Author details

Full Name

Nina Thiessen

Affiliation

ORCID

Career Start Year

2007

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37868040	Mutational topography reflects clinical neuroblastoma heterogeneity.	Cell Genom	2023
34907396	Retraction Note: Tumor necrosis factor overcomes immune evasion in p53-mutant medulloblastoma.	Nat Neurosci	2022
31504207	Allele-Specific Transcript Abundance: A Pilot Study in Healthy Centenarians.		2020
32424282	Tumor necrosis factor overcomes immune evasion in p53-mutant medulloblastoma.	Nat Neurosci	2020
31844324	Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma.	Nat Genet	2020
32107479	Publisher Correction: Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma.	Nat Genet	2020
29872726	Whole genome and whole transcriptome genomic profiling of a metastatic eccrine porocarcinoma.	NPJ Precis Oncol	2018
30361512	RhoGAP domain-containing fusions and PPAPDC1A fusions are recurrent and prognostic in diffuse gastric cancer.	Nat Commun	2018
29246904	Homologous Recombination Deficiency and Platinum-Based Therapy Outcomes in Advanced Breast Cancer.	Clin Cancer Res	2017
28726821	The whole-genome landscape of medulloblastoma subtypes.	Nature	2017
28403581	Correction: miR-509-3p is clinically significant and strongly attenuates cellular migration and multi-cellular spheroids in ovarian cancer.	Oncotarget	2017
28522256	Sporadic Early-Onset Diffuse Gastric Cancers Have High Frequency of Somatic CDH1 Alterations, but Low Frequency of Somatic RHOA Mutations Compared With Late-Onset Cancers.	Gastroenterology	2017
28394352	Spatial heterogeneity in medulloblastoma.	Nat Genet	2017
26536169	Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma.	N Engl J Med	2016
26760213	Divergent clonal selection dominates medulloblastoma at recurrence.	Nature	2016
26977886	Genome-Wide Profiles of Extra-cranial Malignant Rhabdoid Tumors Reveal Heterogeneity and Dysregulated Developmental Pathways.	Cancer Cell	2016
27036018	miR-509-3p is clinically significant and strongly attenuates cellular migration and multi-cellular spheroids in ovarian cancer.	Oncotarget	2016
26061751	Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas.	N Engl J Med	2015
26066993	Burden of Common Complex Disease Variants in the Exomes of Two Healthy Centenarian Brothers.	Gerontology	2015
25062255	JAGuaR: junction alignments to genome for RNA-seq reads.	PLoS One	2014
25263553	Hippo signaling influences HNF4A and FOXA2 enhancer switching during hepatocyte differentiation.	Cell Rep	2014
23334666	The genetic landscape of high-risk neuroblastoma.	Nat Genet	2013
23941359	Barnacle: detecting and characterizing tandem duplications and fusions in transcriptome assemblies.	BMC Genomics	2013
23238790	Identification and analysis of murine pancreatic islet enhancers.	Diabetologia	2013
23634996	Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia.	N Engl J Med	2013
23616356	Complete genomic landscape of a recurring sporadic parathyroid carcinoma.	J Pathol	2013
22072542	Concurrent CIC mutations, IDH mutations, and 1p/19q loss distinguish oligodendrogliomas from other cancers.	J Pathol	2012
22832581	Subgroup-specific structural variation across 1,000 medulloblastoma genomes.	Nature	2012
23086925	Bromodomain-containing protein 4 (BRD4) regulates RNA polymerase II serine 2 phosphorylation in human CD4+ T cells.	J Biol Chem	2012
22072553	Identification and characterization of Hoxa9 binding sites in hematopoietic cells.	Blood	2012
21545844	Class proximity measures--dissimilarity-based classification and display of high-dimensional data.	Journal of Biomedical Informatics	2011
21429165	SNP discovery in black cottonwood (Populus trichocarpa) by population transcriptome resequencing.	Mol Ecol Resour	2011
21505157	SDHA loss-of-function mutations in KIT-PDGFRA wild-type gastrointestinal stromal tumors identified by massively parallel sequencing.	J Natl Cancer Inst	2011
21741595	Cell of origin in AML: susceptibility to MN1-induced transformation is regulated by the MEIS1/AbdB-like HOX protein complex.	Cancer Cell	2011
20651058	System-level analysis of neuroblastoma tumor-initiating cells implicates AURKB as a novel drug target for neuroblastoma.	Clin Cancer Res	2010
20696054	Evolution of an adenocarcinoma in response to selection by targeted kinase inhibitors.	Genome Biol	2010
20935650	De novo assembly and analysis of RNA-seq data.	Nat Methods	2010
20613842	Conserved role of intragenic DNA methylation in regulating alternative promoters.	Nature	2010
20551221	Locus co-occupancy, nucleosome positioning, and H3K4me1 regulate the functionality of FOXA2-, HNF4A-, and PDX1-bound loci in islets and liver.	Genome Res	2010
19151087	Caenorhabditis elegans cisRED: a catalogue of conserved genomic elements.	Nucleic Acids Res	2009
18787082	Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding.	Genome Res	2008
18611952	Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing.	Nucleic Acids Res	2008
17558387	Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing.	Nat Methods	2007