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Author Details

Anna Lapuk
Contextual Genomics Inc.
1998
28
20
PMIDPaper TitleJournal TitlePublished Year
32359774Prevalence of the EGFR T790M and other resistance mutations in the Australian population and histopathological correlation in a small subset of cases.Pathology2020
30735634Widespread and Functional RNA Circularization in Localized Prostate Cancer.Cell2019
30889379The Proteogenomic Landscape of Curable Prostate Cancer.Cancer Cell2019
29698444Formalin fixation increases deamination mutation signature but should not lead to false positive mutations in clinical practice.PLoS One2018
24830689The role of mRNA splicing in prostate cancer.Asian J Androl2014
25036042A meta-analysis approach for characterizing pan-cancer mechanisms of drug sensitivity in cell lines.PLoS One2014
25155515Heterogeneity in the inter-tumor transcriptome of high risk prostate cancer.Genome Biol2014
22162557Next-generation sequencing of prostate tumors provides independent evidence of xenotropic murine leukemia virus-related gammaretrovirus contamination.J Clin Microbiol2012
22927308Poly-gene fusion transcripts and chromothripsis in prostate cancer.Genes Chromosomes Cancer2012
22553170From sequence to molecular pathology, and a mechanism driving the neuroendocrine phenotype in prostate cancer.J Pathol2012
22252602Next generation sequencing of prostate cancer from a patient identifies a deficiency of methylthioadenosine phosphorylase, an exploitable tumor target.Mol Cancer Ther2012
22294438Integrated genome and transcriptome sequencing identifies a novel form of hybrid and aggressive prostate cancer.J Pathol2012
21478487Comrad: detection of expressed rearrangements by integrated analysis of RNA-Seq and low coverage genome sequence data.Bioinformatics2011
21685072Optimally discriminative subnetwork markers predict response to chemotherapy.Bioinformatics2011
20605923Exon-level microarray analyses identify alternative splicing programs in breast cancer.Mol Cancer Res2010
18573797FIRMA: a method for detection of alternative splicing from exon array data.Bioinformatics2008
17908964Amplification of PVT1 contributes to the pathophysiology of ovarian and breast cancer.Clin Cancer Res2007
16461635Decoding the fine-scale structure of a breast cancer genome and transcriptome.Genome Res2006
17157792Genomic and transcriptional aberrations linked to breast cancer pathophysiologies.Cancer Cell2006
17157791A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes.Cancer Cell2006
16951202Organic cation transporters are determinants of oxaliplatin cytotoxicity.Cancer Res2006
15619731Construction and application of a full-coverage, high-resolution, human chromosome 8q genomic microarray for comparative genomic hybridization.Cytometry A2005
15034871Computational BAC clone contig assembly for comprehensive genome analysis.Genes Chromosomes Cancer2004
15502842The RAB25 small GTPase determines aggressiveness of ovarian and breast cancers.Nat Med2004
12788976End-sequence profiling: sequence-based analysis of aberrant genomes.Proc Natl Acad Sci U S A2003
11002847Human endogenous retrovirus HERV-K/HERV-H evolution in the genome of primates.Dokl Biochem2000
10211950A human endogenous retrovirus-like (HERV) LTR formed more than 10 million years ago due to an insertion of HERV-H LTR into the 5' LTR of HERV-K is situated on human chromosomes 10, 19 and Y.J Gen Virol1999
9490288Subfamilies and nearest-neighbour dendrogram for the LTRs of human endogenous retroviruses HERV-K mapped on human chromosome 19: physical neighbourhood does not correlate with identity level.Hum Genet1998
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Collaborators

Colin C Collins
University of British Columbia
Co-authored papers 16
Stanislav V Volik
University of British Columbia
Co-authored papers 13
Joe W Gray
Oregon Health and Science University
Co-authored papers 9
Suleyman Cenk Sahinalp
National Cancer Institute, National Institutes of Health
Co-authored papers 7
Chunxiao Wu
Shandong Provincial Hospital, Cheeloo College of Medicine, Shandong University
Co-authored papers 6
Alexander W Wyatt
University of British Columbia
Co-authored papers 6
Martin E Gleave
University of British Columbia
Co-authored papers 6
Yuzhuo Wang
University of British Columbia
Co-authored papers 5
Andrew McPherson
Memorial Sloan Kettering Cancer Center
Co-authored papers 5
Marco A Marra
University of British Columbia
Co-authored papers 5
Fan Mo
Institute of Stem Cell and Regeneration, Chinese Academy of Sciences
Co-authored papers 5
Sonal Brahmbhatt
University of British Columbia
Co-authored papers 4
Shawn Anderson
University of British Columbia
Co-authored papers 4
Brian McConeghy
University of British Columbia
Co-authored papers 4
Arul M Chinnaiyan
University of Michigan Medical School.
Co-authored papers 4
Anne Haegert
University of British Columbia
Co-authored papers 4
Robert H Bell
University of British Columbia
Co-authored papers 4
Paul C Boutros
University of California los angeles
Co-authored papers 4
Ladan Fazli
University of British Columbia
Co-authored papers 4
Robert G Bristow
University of Toronto
Co-authored papers 4
Robert Shukin
University of British Columbia
Co-authored papers 4
Antonio Hurtado-Coll
University of British Columbia
Co-authored papers 4
Fereydoun Hormozdiari
University of California davis
Co-authored papers 3
Christopher A Maher
Washington University in St Louis
Co-authored papers 3
Iman Hajirasouliha
Institute for Computational Biomedicine
Co-authored papers 3
Faraz Hach
University of British Columbia
Co-authored papers 3
Paul T Spellman
Oregon Health & Science University Hospital.
Co-authored papers 3
Martin Hirst
University of British Columbia
Co-authored papers 2
Terence P Speed
Walter and Eliza Hall Institute of Medical Research
Co-authored papers 2
Yu-Jia Shiah
Ontario Institute for Cancer Research
Co-authored papers 2
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