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Author Details

Fran??oise Thibaud-Nissen
National Center for Biotechnology Information, National Institutes of Health
2003
48
31
Gloria M Sheynkman (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37962425RefSeq and the prokaryotic genome annotation pipeline in the age of metagenomes.Nucleic Acids Res2024
36330812The Assembled Genome of the Stroke-Prone Spontaneously Hypertensive Rat.Hypertension2023
38077089The Complete Sequence and Comparative Analysis of Ape Sex Chromosomes.bioRxiv2023
38066002Chromosome-level genome assembly of chub mackerel (Scomber japonicus) from the Indo-Pacific Ocean.Sci Data2023
37848431The admixed brushtail possum genome reveals invasion history in New Zealand and novel imprinted genes.Nat Commun2023
37612512The complete sequence of a human Y chromosome.Nature2023
36749728Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories.Proc Natl Acad Sci U S A2023
36662619A chromosome-level reference genome and pangenome for barn swallow population genomics.Cell Rep2023
34850941Database resources of the national center for biotechnology information.Nucleic Acids Res2022
35361932Merfin: improved variant filtering, assembly evaluation and polishing via k-mer validation.Nat Methods2022
35388217A joint NCBI and EMBL-EBI transcript set for clinical genomics and research.Nature2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
35042802Standards recommendations for the Earth BioGenome Project.Proc Natl Acad Sci U S A2022
33270901RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation.Nucleic Acids Res2021
36777713Population genomics of the critically endangered kākāpō.Cell Genom2021
33911273Towards complete and error-free genome assemblies of all vertebrate species.Nature2021
33953399A high-quality bonobo genome refines the analysis of hominid evolution.Nature2021
34253230Author Correction: Improved reference genome of the arboviral vector Aedes albopictus.Genome Biol2021
31602479Database resources of the National Center for Biotechnology Information.Nucleic Acids Res2020
32847630Improved reference genome of the arboviral vector Aedes albopictus.Genome Biol2020
32350247Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle.Nat Commun2020
32191811De novo assembly of the cattle reference genome with single-molecule sequencing.Gigascience2020
30651564Chromosome-level assembly of the water buffalo genome surpasses human and goat genomes in sequence contiguity.Nat Commun2019
30945415A guinea fowl genome assembly provides new evidence on evolution following domestication and selection in galliformes.Mol Ecol Resour2019
30996023The Genome of C57BL/6J "Eve", the Mother of the Laboratory Mouse Genome Reference Strain.G3 (Bethesda)2019
29112715RefSeq: an update on prokaryotic genome annotation and curation.Nucleic Acids Res2018
29706541The Egyptian Rousette Genome Reveals Unexpected Features of Bat Antiviral Immunity.Cell2018
29329394Analysis of the Aedes albopictus C6/36 genome provides insight into cell line utility for viral propagation.Gigascience2018
27862469Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.Plant J2017
28396521Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly.Genome Res2017
29048578Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n = 50).Gigascience2017
27852011A New Chicken Genome Assembly Provides Insight into Avian Genome Structure.G3 (Bethesda)2017
27356984Long-read sequencing and de novo assembly of a Chinese genome.Nat Commun2016
26553804Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation.Nucleic Acids Res2016
26578580Assembly: a resource for assembled genomes at NCBI.Nucleic Acids Res2016
26377836The genome of the vervet (Chlorocebus aethiops sabaeus).Genome Res2015
24259432RefSeq: an update on mammalian reference sequences.Nucleic Acids Res2014
25315136Genome of the house fly, Musca domestica L., a global vector of diseases with adaptations to a septic environment.Genome Biol2014
20198573Functional analysis of a TGA factor-binding site located in the promoter region controlling salicylic acid-induced NIMIN-1 expression in Arabidopsis.Genet Mol Res2010
19347655Plant genome annotation methods.Methods Mol Biol2009
19607679Identification and characterization of pseudogenes in the rice gene complement.BMC Genomics2009
19641029Evolutionary and expression signatures of pseudogenes in Arabidopsis and rice.Plant Physiol2009
17145706The TIGR Rice Genome Annotation Resource: improvements and new features.Nucleic Acids Res2007
17961238EuCAP, a Eukaryotic Community Annotation Package, and its application to the rice genome.BMC Genomics2007
16824183Development of Arabidopsis whole-genome microarrays and their application to the discovery of binding sites for the TGA2 transcription factor in salicylic acid-treated plants.Plant J2006
17001497Expressed sequence tags from loblolly pine embryos reveal similarities with angiosperm embryogenesis.Plant Mol Biol2006
15453914Microarrays for global expression constructed with a low redundancy set of 27,500 sequenced cDNAs representing an array of developmental stages and physiological conditions of the soybean plant.BMC Genomics2004
12746518Clustering of microarray data reveals transcript patterns associated with somatic embryogenesis in soybean.Plant Physiol2003
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Collaborators

National Human Genome Research Institute, National Institutes of Health
Co-authored papers 12
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 11
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Co-authored papers 11
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 10
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 6
The Rockefeller University
Co-authored papers 6
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Co-authored papers 5
European Bioinformatics Institute
Co-authored papers 5
Institute of Informatics and Data Sciences, University of Missouri
Co-authored papers 5
University of Washington
Co-authored papers 4
Co-authored papers 4
Genomics Institute, University of California Santa Cruz
Co-authored papers 4
Max Planck Institute of Molecular Cell Biology and Genetics
Co-authored papers 4
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 4
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 4
UC Santa Cruz Genomics Institute, University of California
Co-authored papers 4
DNAnexus Inc.
Co-authored papers 3
University of California Davis
Co-authored papers 3
University of Washington
Co-authored papers 3
The Ohio State University
Co-authored papers 3
Center for Computational Biology, Johns Hopkins University
Co-authored papers 3
National Center for Biotechnology Information, National Institutes of Health.
Co-authored papers 3
University of California san francisco
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McDonnell Genome Institute, Washington University
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Center for Genomics-Enabled Plant Science, Michigan State University
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Department of Biochemistry and the Fralin Life Sciences Institute, Virginia Tech
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National Center for Biotechnology Information, National Institutes of Health
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University of Cambridge
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Stowers Institute for Medical Research
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