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Author Details

Tao Jiang
University of California riverside
1992
128
33
PMIDPaper TitleJournal TitlePublished Year
37886485Impact of Various High Fat Diets on Gene Expression and the Microbiome Across the Mouse Intestines.Res Sq2023
35025694Transcriptome Profiling of '<i>Candidatus</i> Liberibacter asiaticus' in Citrus and Psyllids.Phytopathology2022
36777007A Global Analysis of Alternative Splicing of <i>Dichocarpum</i> Medicinal Plants, Ranunculales.Curr Genomics2022
33461501DeepLPI: a multimodal deep learning method for predicting the interactions between lncRNAs and protein isoforms.BMC Bioinformatics2021
34169280FINER: enhancing the prediction of tissue-specific functions of isoforms by refining isoform interaction networks.NAR Genom Bioinform2021
32192492The contribution of electronic health records to risk management through accreditation of residential aged care homes in Australia.BMC Med Inform Decis Mak2020
31693090Quantifying functional impact of non-coding variants with multi-task Bayesian neural network.Bioinformatics2020
31794680OMGS: Optical Map-Based Genome Scaffolding.J Comput Biol2020
31912136Dysregulation of Hypothalamic Gene Expression and the Oxytocinergic System by Soybean Oil Diets in Male Mice.Endocrinology2020
32477613A simulated annealing approach for resolution guided homogeneous cryo-electron microscopy image selection.Quant Biol2020
30535380DeepIsoFun: a deep domain adaptation approach to predict isoform functions.Bioinformatics2019
31510699DIFFUSE: predicting isoform functions from sequences and expression profiles via deep learning.Bioinformatics2019
31081512DeepPASTA: deep neural network based polyadenylation site analysis.Bioinformatics2019
30587966A high bioavailability and sustained-release nano-delivery system for nintedanib based on electrospray technology.Int J Nanomedicine2018
30052912TAPAS: tool for alternative polyadenylation site analysis.Bioinformatics2018
30424213UWB Bandpass Filter with Dual Notched Bands Using T-Shaped Resonator and L-Shaped Defected Microstrip Structure.Micromachines (Basel)2018
30598101Constructing tissue-specific transcriptional regulatory networks via a Markov random field.BMC Genomics2018
29295228Text Data Mining of Aged Care Accreditation Reports to Identify Risk Factors in Medication Management in Australian Residential Aged Care Homes.Stud Health Technol Inform2017
28482046rMFilter: acceleration of long read-based structure variation calling by chimeric read filtering.Bioinformatics2017
27522083SDEAP: a splice graph based differential transcript expression analysis tool for population data.Bioinformatics2016
27760567TransComb: genome-guided transcriptome assembly via combing junctions in splicing graphs.Genome Biol2016
27501930The Impact of Electronic Health Records on Risk Management of Information Systems in Australian Residential Aged Care Homes.J Med Syst2016
27470167eSNPO: An eQTL-based SNP Ontology and SNP functional enrichment analysis platform.Sci Rep2016
25322838Differential regulation enrichment analysis via the integration of transcriptional regulatory network and gene expression data.Bioinformatics2015
26252423Sequencing of 15 622 gene-bearing BACs clarifies the gene-dense regions of the barley genome.Plant J2015
26210430The Relationship between Using Electronic Health Records and Meeting Accreditation Standards for Client Safety in Residential Aged Care Homes.Stud Health Technol Inform2015
25708199Accurate inference of isoforms from multiple sample RNA-Seq data.BMC Genomics2015
24074750Analysis of multiple wavelengths of Lamb waves generated by meander-line coil EMATs.Ultrasonics2014
24943533The impact of electronic health records on client safety in aged care homes.Stud Health Technol Inform2014
24932000AlignGraph: algorithm for secondary de novo genome assembly guided by closely related references.Bioinformatics2014
24369151Phylogeny-based classification of microbial communities.Bioinformatics2014
23493323BRANCH: boosting RNA-Seq assemblies with partial or related genomic sequences.Bioinformatics2013
24346768Identifying potential cancer driver genes by genomic data integration.Sci Rep2013
24116030Detection of homologous recombination events in bacterial genomes.PLoS One2013
23993580Differentiation of Chinese rice wines from different wineries based on mineral elemental fingerprinting.Food Chem2013
23793751Differential gene expression analysis using coexpression and RNA-Seq data.Bioinformatics2013
23414203Novel core promoter elements in the oomycete pathogen Phytophthora infestans and their influence on expression detected by genome-wide analysis.BMC Genomics2013
21383417An efficient algorithm for haplotype inference on pedigrees with recombinations and mutations.IEEE/ACM Trans Comput Biol Bioinform2012
23009059Separating metagenomic short reads into genomes via clustering.Algorithms Mol Biol2012
23060617Transcriptome assembly and isoform expression level estimation from biased RNA-Seq reads.Bioinformatics2012
22640891Improving oligonucleotide fingerprinting of rRNA genes by implementation of polony microarray technology.J Microbiol Methods2012
22383578Identification of a binding motif specific to HNF4 by comparative analysis of multiple nuclear receptors.Nucleic Acids Res2012
22053078Detecting genome-wide epistases based on the clustering of relatively frequent items.Bioinformatics2012
20733237A max-flow-based approach to the identification of protein complexes using protein interaction and microarray data.IEEE/ACM Trans Comput Biol Bioinform2011
21985453Improving probe set selection for microbial community analysis by leveraging taxonomic information of training sequences.BMC Bioinformatics2011
22181744Active microwave negative-index metamaterial transmission line with gain.Phys Rev Lett2011
21810899SEED: efficient clustering of next-generation sequences.Bioinformatics2011
21951053IsoLasso: a LASSO regression approach to RNA-Seq based transcriptome assembly.J Comput Biol2011
21523936Inferring haplotypes from genotypes on a pedigree with mutations, genotyping errors and missing alleles.J Bioinform Comput Biol2011
21685067Uncover disease genes by maximizing information flow in the phenome-interactome network.Bioinformatics2011
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Collaborators

Stefano Lonardi
University of California Riverside
Co-authored papers 7
Thomas Girke
Institute for Integrative Genome Biology, University of California Riverside
Co-authored papers 7
Rui Jiang
Co-authored papers 6
Frances M Sladek
University of California riverside
Co-authored papers 5
Dong Xu
University of Missouri
Co-authored papers 3
Chuhu Yang
Oriomics Inc. Hangzhou
Co-authored papers 3
Ying Xu
Oak Ridge National Laboratory
Co-authored papers 3
Ying Xu
The China-Japan Union Hospital, Jilin University
Co-authored papers 2
Xinshu Xiao
University of California los angeles
Co-authored papers 2
Kyle Ellrott
Oregon Health & Science University
Co-authored papers 2
Xuegong Zhang
Co-authored papers 1
Victor Olman
University of Georgia
Co-authored papers 1
Roger P Wise
USDA-Agricultural Research Service
Co-authored papers 1
Jonathan H Badger
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Co-authored papers 1
Laurel Cooper
Oregon State University
Co-authored papers 1
Rod A Wing
Arizona Genomics Institute, University of Arizona
Co-authored papers 1
Julie K A Kasarjian
Eisenhower Medical Center
Co-authored papers 1
Heather Witt
Co-authored papers 1
Yingyao Zhou
Genomics Institute of the Novartis Research Foundation
Co-authored papers 1
Qiao Liu
Stanford University
Co-authored papers 1
Raphael Z Sangeda
Muhimbili University of Health and Allied Sciences
Co-authored papers 1
Peter M A Sloot
Institute for Advanced Study, University of Amsterdam.
Co-authored papers 1
Jonathan Braun
Inflammatory Bowel and Immunobiology Research Institute, Cedars-Sinai Medical Center
Co-authored papers 1
Vladimir Vacic
Stanley Institute for Cognitive Genomics
Co-authored papers 1
Denisa Duma
Baylor College of Medicine
Co-authored papers 1
Junichi Ryu
Loma Linda University
Co-authored papers 1
Richard M Karp
University of California at Berkeley and International Computer Science Institute
Co-authored papers 1
Release 1.2