Skip to Main Content

Author Details

Zhongming Zhao
Center for Precision Health, The University of Texas Health Science Center at Houston
1998
447
58
PMIDPaper TitleJournal TitlePublished Year
38037121Enabling the clinical application of artificial intelligence in genomics: a perspective of the AMIA Genomics and Translational Bioinformatics Workgroup.J Am Med Inform Assoc2024
38063850Single-Cell Transcriptomics Reveals Pre-existing COVID-19 Vulnerability Factors in Lung Cancer Patients.Mol Cancer Res2024
36282535A gene regulatory network approach harmonizes genetic and epigenetic signals and reveals repurposable drug candidates for multiple sclerosis.Hum Mol Genet2023
37860697The transcription factor IRF4 determines the anti-tumor immunity of CD8<sup>+</sup> T cells.iScience2023
38074467Accurate prediction of functional effect of single amino acid variants with deep learning.Comput Struct Biotechnol J2023
37857625Author Correction: Whole-Genome Sequencing Analysis of Human Metabolome in Multi-Ethnic Populations.Nat Commun2023
37625794Genetic inactivation of β-catenin is salubrious, whereas its activation is deleterious in desmoplakin cardiomyopathy.Cardiovasc Res2023
37853364Advances and challenges in Bioinformatics and Biomedical Engineering: IWBBIO 2020.BMC Bioinformatics2023
37479893Single-cell chromatin accessibility profiling of acute myeloid leukemia reveals heterogeneous lineage composition upon therapy-resistance.Commun Biol2023
37792777Federated learning based futuristic biomedical big-data analysis and standardization.PLoS One2023
37992195DegronMD: Leveraging Evolutionary and Structural Features for Deciphering Protein-Targeted Degradation, Mutations, and Drug Response to Degrons.Mol Biol Evol2023
37576714Optimal ranking and directional signature classification using the integral strategy of multi-objective optimization-based association rule mining of multi-omics data.Front Bioinform2023
35470070deCS: A Tool for Systematic Cell Type Annotations of Single-cell RNA Sequencing Data among Human Tissues.Genomics Proteomics Bioinformatics2023
37025902Convolutional neural network for biomarker discovery for triple negative breast cancer with RNA sequencing data.Heliyon2023
37257192Dual targeting of CDK4/6 and Bcl-2 exhibits a potent antitumor effect on mantle cell lymphoma.Blood Adv2023
37253714Whole-Genome Sequencing Analysis of Human Metabolome in Multi-Ethnic Populations.Nat Commun2023
37239423PPIGCF: A Protein-Protein Interaction-Based Gene Correlation Filter for Optimal Gene Selection.Genes (Basel)2023
37372402MitoTrace: A Computational Framework for Analyzing Mitochondrial Variation in Single-Cell RNA Sequencing Data.Genes (Basel)2023
36973285Rewired m<sup>6</sup>A epitranscriptomic networks link mutant p53 to neoplastic transformation.Nat Commun2023
36961310Benchmark of embedding-based methods for accurate and transferable prediction of drug response.Brief Bioinform2023
36818425PANoptosis is a prominent feature of desmoplakin cardiomyopathy.J Cardiovasc Aging2023
36480442Potential Therapeutic Agents on Alzheimer's Disease through Molecular Docking and Molecular Dynamics Simulation Study of Plant-Based Compounds.Chem Biodivers2023
36720042CD73-Dependent Adenosine Signaling through Adora2b Drives Immunosuppression in Ductal Pancreatic Cancer.Cancer Res2023
36653370Wrapper-based deep feature optimization for activity recognition in the wearable sensor networks of healthcare systems.Sci Rep2023
36583689Innately expressed estrogen-related receptors in the skeletal muscle are indispensable for exercise fitness.FASEB J2023
36873907Deep learning for detecting and elucidating human T-cell leukemia virus type 1 integration in the human genome.Patterns (N Y)2023
36685963Breast cancer detection: Shallow convolutional neural network against deep convolutional neural networks based approach.Front Genet2023
36426404A multicenter study of clinical impact of variant of uncertain significance reclassification in breast, ovarian and colorectal cancer susceptibility genes.Cancer Med2023
368653873PNMF-MKL: A non-negative matrix factorization-based multiple kernel learning method for multi-modal data integration and its application to gene signature detection.Front Genet2023
36796878PKR induces TGF-β and limits oncolytic immune therapy.J Immunother Cancer2023
36863698De novo mutations disturb early brain development more frequently than common variants in schizophrenia.Am J Med Genet B Neuropsychiatr Genet2023
34716463Comprehensive characterization of tumor immune landscape following oncolytic virotherapy by single-cell RNA sequencing.Cancer Immunol Immunother2022
35774010Spatiotemporal MicroRNA-Gene Expression Network Related to Orofacial Clefts.J Dent Res2022
35610053WebCSEA: web-based cell-type-specific enrichment analysis of genes.Nucleic Acids Res2022
35401675Crucial Roles of microRNA-16-5p and microRNA-27b-3p in Ameloblast Differentiation Through Regulation of Genes Associated With Amelogenesis Imperfecta.Front Genet2022
35640139Identifying candidate genes and drug targets for Alzheimer's disease by an integrative network approach using genetic and brain region-specific proteomic data.Hum Mol Genet2022
35459739Adipose tissue-specific ablation of Ces1d causes metabolic dysregulation in mice.Life Sci Alliance2022
35419027A Deep Learning-Based Framework for Supporting Clinical Diagnosis of Glioblastoma Subtypes.Front Genet2022
35360838Explanation-Driven Deep Learning Model for Prediction of Brain Tumour Status Using MRI Image Data.Front Genet2022
35451016GDF5+ chondroprogenitors derived from human pluripotent stem cells preferentially form permanent chondrocytes.Development2022
35812739Causal Inference of Genetic Variants and Genes in Amyotrophic Lateral Sclerosis.Front Genet2022
35559673Genome-wide CRISPR screens using isogenic cells reveal vulnerabilities conferred by loss of tumor suppressors.Sci Adv2022
35559018An Ensemble-Based Deep Convolutional Neural Network for Computer-Aided Polyps Identification From Colonoscopy.Front Genet2022
35484501Comparison of five supervised feature selection algorithms leading to top features and gene signatures from multi-omics data in cancer.BMC Bioinformatics2022
35412907Hereditary retinoblastoma iPSC model reveals aberrant spliceosome function driving bone malignancies.Proc Natl Acad Sci U S A2022
36526218NetBCE: An Interpretable Deep Neural Network for Accurate Prediction of Linear B-cell Epitopes.Genomics Proteomics Bioinformatics2022
36522785The challenges and opportunities of scRNA-seq in COVID-19 research and clinical translation.Virol J2022
36212141Detecting COVID-19 infection status from chest X-ray and CT scan <i>via</i> single transfer learning-driven approach.Front Genet2022
36070368Pharmacogenomic landscape of head and neck squamous cell carcinoma informs precision oncology therapy.Sci Transl Med2022
36302555USP7 substrates identified by proteomics analysis reveal the specificity of USP7.Genes Dev2022
  • 1 - 50 of 447

Recommended Authors

Yongsheng Li
Harbin Medical University
Career Start Year 2011
Number of shared co-authors 8
Jianlei Gu
Yale University
Career Start Year 2009
Number of shared co-authors 0
Qiyuan Li
National Institute of Data Science in Health and Medicine, Xiamen University
Career Start Year 2008
Number of shared co-authors 4
Ying-Wooi Wan
Baylor College of Medicine
Career Start Year 2008
Number of shared co-authors 5
Younhee Ko
Hankuk University of Foreign Studies
Career Start Year 2008
Number of shared co-authors 0
Eunjee Lee
Chungnam National University
Career Start Year 2007
Number of shared co-authors 4
Jing Chen
College of Bioinformatics Science and Technology, Harbin Medical University
Career Start Year 2007
Number of shared co-authors 3
Hongzhu Qu
University of Chinese Academy of Sciences
Career Start Year 2007
Number of shared co-authors 0
Lana X Garmire
University of Michigan ann arbor
Career Start Year 2007
Number of shared co-authors 3
J??ri Reimand
Ontario Institute for Cancer Research
Career Start Year 2007
Number of shared co-authors 9
Yuanfang Guan
University of Michigan ann arbor
Career Start Year 2007
Number of shared co-authors 11
Hyojung Paik
University of Science and Technology (UST)
Career Start Year 2006
Number of shared co-authors 1
Hyunju Lee
Gwangju Institute of Science and Technology
Career Start Year 2006
Number of shared co-authors 1
Semin Lee
Ulsan National Institute of Science and Technology (UNIST)
Career Start Year 2005
Number of shared co-authors 19
Dongxiao Zhu
Wayne State University
Career Start Year 2005
Number of shared co-authors 0
Bin Zhang
Graduate School of Medicine, The University of Tokyo
Career Start Year 2004
Number of shared co-authors 8
Doheon Lee
Korea Advanced Institute of Science and Technology
Career Start Year 2004
Number of shared co-authors 0
Xianghong Jasmine Zhou
David Geffen School of Medicine, University of California at Los Angeles
Career Start Year 2004
Number of shared co-authors 2
Weidong Tian
Institute of Biostatistics, Fudan University
Career Start Year 2003
Number of shared co-authors 4
Zhaohui S Qin
Emory University
Career Start Year 2002
Number of shared co-authors 9
Olivier Elemento
Meyer Cancer Center
Career Start Year 2002
Number of shared co-authors 17
Mikhail G Dozmorov
Virginia Commonwealth University
Career Start Year 2001
Number of shared co-authors 12
Chen-Hsiang Yeang
Institute of Statistical Science
Career Start Year 2001
Number of shared co-authors 0
Youping Deng
John A. Burns School of Medicine, University of Hawaii at Manoa
Career Start Year 1999
Number of shared co-authors 2
Wei Wang
IBM Thomas J Watson Research Center, University of California Los Angeles, University of North Carolina at Chapel Hill
Career Start Year 1999
Number of shared co-authors 3
Celine Lefebvre
The Scripps Research Institute
Career Start Year 1999
Number of shared co-authors 2
Yan Cui
University of Tennessee Health Science Center
Career Start Year 1998
Number of shared co-authors 1
Igor Jurisica
Schroeder Arthritis Institute
Career Start Year 1998
Number of shared co-authors 5
Tatsuhiko Tsunoda
The University of Tokyo
Career Start Year 1984
Number of shared co-authors 9
Seiya Imoto
Human Genome Center, The Institute of Medical Science, The University of Tokyo
Career Start Year 1978
Number of shared co-authors 2

Collaborators

Peilin Jia
Center for Precision Health, The University of Texas Health Science Center at Houston
Co-authored papers 153
Jingchun Sun
The University of Texas Health Science Center at Houston
Co-authored papers 44
Yulin Dai
The University of Texas Health Science Center at Houston.
Co-authored papers 39
Kenneth S Kendler
Virginia Commonwealth University
Co-authored papers 26
Xiangning Chen
Center for Precision Health, The University of Texas Health Science Center at Houston
Co-authored papers 24
Hua Xu
The University of Texas Health Science Center at Houston
Co-authored papers 17
Jingchun Chen
Nevada Institute of Personalized Medicine, University of Nevada Las Vegas
Co-authored papers 15
Edwin J C G van den Oord
Co-authored papers 13
Brien P Riley
Virginia Commonwealth University
Co-authored papers 12
Pora Kim
The University of Texas Health Science Center at Houston
Co-authored papers 11
Siyuan Zheng
Greehey Children's Cancer Research Institute
Co-authored papers 10
Yan-Mei Guo
The Sixth People's Hospital of Hebei Province
Co-authored papers 7
Cizhong Jiang
Co-authored papers 6
Xi Chen
Co-authored papers 6
Bing Zhang
Baylor College of Medicine
Co-authored papers 6
Scott L Letendre
University of California, university of california san diego
Co-authored papers 5
Donald Franklin
University of California San Diego
Co-authored papers 5
Mary Kay Washington
Co-authored papers 5
Degui Zhi
University of Texas Health Science Center at Houston
Co-authored papers 5
Ronald J Ellis
University of California
Co-authored papers 5
Todd Hulgan
Vanderbilt University Medical Center
Co-authored papers 5
Carlos N Pato
Co-authored papers 5
Yonghui Wu
University of Florida
Co-authored papers 5
Asha R Kallianpur
Cleveland Clinic/Lerner Research Institute
Co-authored papers 5
Bairong Shen
Institute for Systems Genetics, Western China Hospital, Sichuan University
Co-authored papers 5
David C Samuels
Vanderbilt University
Co-authored papers 5
Xiaoqian Jiang
Carnegie Mellon University, The University of Texas Health Science Center at Houston, University of California San Diego
Co-authored papers 4
Igor Grant
University of California San Diego
Co-authored papers 4
Dung-Fang Lee
Co-authored papers 4
Hua Xu
Yale University
Co-authored papers 4
Release 1.2