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Author Details

Javier Fernandez-Martinez
The Rockefeller University
2002
39
23
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36931235Depicting protein structures as schematics.Trends Biochem Sci2023
37738963Implications of a multiscale structure of the yeast nuclear pore complex.Mol Cell2023
37066338Dynamic molecular mechanism of the nuclear pore complex permeability barrier.bioRxiv2023
34982960Comprehensive structure and functional adaptations of the yeast nuclear pore complex.Cell2022
35412228Affinity Isolation of Endogenous Saccharomyces Cerevisiae Nuclear Pore Complexes.Methods Mol Biol2022
33333016Dissecting the Structural Dynamics of the Nuclear Pore Complex.Mol Cell2021
33563541One Ring to Rule them All? Structural and Functional Diversity in the Nuclear Pore Complex.Trends Biochem Sci2021
34648371Replication and single-cycle delivery of SARS-CoV-2 replicons.Science2021
34527957Measuring <i>in vivo</i> protein turnover and exchange in yeast macromolecular assemblies.STAR Protoc2021
34614934Spatial coherence from Nd<sup>3+</sup> quantum emitters mediated by a plasmonic chain.Opt Express2021
29539637Integrative structure and functional anatomy of a nuclear pore complex.Nature2018
28624666The nuclear pore complex core scaffold and permeability barrier: variations of a common theme.Curr Opin Cell Biol2017
28162953Molecular Architecture of the Major Membrane Ring Component of the Nuclear Pore Complex.Structure2017
26864114Developing genetic tools to exploit Chaetomium thermophilum for biochemical analyses of eukaryotic macromolecular assemblies.Sci Rep2016
27839866Structure and Function of the Nuclear Pore Complex Cytoplasmic mRNA Export Platform.Cell2016
27371601Protein Complex Purification by Affinity Capture.Cold Spring Harb Protoc2016
27371597Native Elution of Yeast Protein Complexes Obtained by Affinity Capture.Cold Spring Harb Protoc2016
27371598Density Gradient Ultracentrifugation to Isolate Endogenous Protein Complexes after Affinity Capture.Cold Spring Harb Protoc2016
27371596Optimized Affinity Capture of Yeast Protein Complexes.Cold Spring Harb Protoc2016
26849307A Robust Workflow for Native Mass Spectrometric Analysis of Affinity-Isolated Endogenous Protein Assemblies.Anal Chem2016
26436480A strategy for dissecting the architectures of native macromolecular assemblies.Nat Methods2015
25161197Structural characterization by cross-linking reveals the detailed architecture of a coatomer-related heptameric module from the nuclear pore complex.Mol Cell Proteomics2014
25073740Molecular architecture and function of the SEA complex, a modulator of the TORC1 pathway.Mol Cell Proteomics2014
25139911Integrative structure-function mapping of the nucleoporin Nup133 suggests a conserved mechanism for membrane anchoring of the nuclear pore complex.Mol Cell Proteomics2014
23499021Structure, dynamics, evolution, and function of a major scaffold component in the nuclear pore complex.Structure2013
22331846Structure-function mapping of a heptameric module in the nuclear pore complex.J Cell Biol2012
22544723Atomic structure of the nuclear pore complex targeting domain of a Nup116 homologue from the yeast, Candida glabrata.Proteins2012
22321828A jumbo problem: mapping the structure and functions of the nuclear pore complex.Curr Opin Cell Biol2012
21365675Structure of the C-terminal domain of Saccharomyces cerevisiae Nup133, a component of the nuclear pore complex.Proteins2011
21880896Nuclear transporters in a multinucleated organism: functional and localization analyses in Aspergillus nidulans.Mol Biol Cell2011
20310066Structures of the autoproteolytic domain from the Saccharomyces cerevisiae nuclear pore complex component, Nup145.Proteins2010
19318129Importin alpha is an essential nuclear import carrier adaptor required for proper sexual and asexual development and secondary metabolism in Aspergillus nidulans.Fungal Genet Biol2009
19383720Attenuation of Notch signalling by the Down-syndrome-associated kinase DYRK1A.J Cell Sci2009
19524430Nuclear pore complex biogenesis.Curr Opin Cell Biol2009
17890114NapA and NapB are the Aspergillus nidulans Nap/SET family members and NapB is a nuclear protein specifically interacting with importin alpha.Fungal Genet Biol2008
17116695Nuclear export of the transcription factor NirA is a regulatory checkpoint for nitrate induction in Aspergillus nidulans.Mol Cell Biol2007
12656192Description of Alcanivorax venustensis sp. nov. and reclassification of Fundibacter jadensis DSM 1 21 78T (Bruns and Berthe-Corti 1999) as Alcanivorax jadensis comb. nov., members of the emended genus Alcanivorax.Int J Syst Evol Microbiol2003
14636595Overlap of nuclear localisation signal and specific DNA-binding residues within the zinc finger domain of PacC.J Mol Biol2003
12353875Sequence diversity of the internal transcribed spacer (ITS) region of the rRNA operons among different serogroups of Legionella pneumophila isolates.Syst Appl Microbiol2002
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Collaborators

Michael P Rout
The Rockefeller University
Co-authored papers 29
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 15
Brian T Chait
The Rockefeller University
Co-authored papers 14
Seung Joong Kim
Korea Advanced Institute of Science and Technology (KAIST)
Co-authored papers 10
Subbiah Parthasarathy
New York University Grossman School of Medicine
Co-authored papers 6
Yi Shi
College of Medicine, Yangzhou University
Co-authored papers 6
Stephen K Burley
The State University of New Jersey
Co-authored papers 5
Rosemary Williams
The Rockefeller University
Co-authored papers 5
Ilona Nudelman
The Rockefeller University
Co-authored papers 5
David L Stokes
NYU School of Medicine
Co-authored papers 5
Zhanna Hakhverdyan
The Rockefeller University
Co-authored papers 5
Jeremy Phillips
US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 5
Riccardo Pellarin
CNRS UMR 5086 and Universite Claude Bernard Lyon 1
Co-authored papers 5
J Michael Sauder
Eli Lilly and Co.
Co-authored papers 5
Hiro Tsuruta
Stanford University
Co-authored papers 4
Steven C Almo
Albert Einstein College of Medicine
Co-authored papers 4
Ursula Pieper
University of California san francisco
Co-authored papers 4
Paula Upla
Skirball Institute of Biomolecular Medicine, New York University School of Medicine
Co-authored papers 4
Josef D Franke
Creighton University
Co-authored papers 4
Jeffrey B Bonanno
Albert Einstein College of Medicine
Co-authored papers 4
Junjie Wang
The Rockefeller University
Co-authored papers 4
Wenzhu Zhang
Dalian University of Technology
Co-authored papers 4
Tsutomu Matsui
Stanford University
Co-authored papers 3
Ilan E Chemmama
University of California san francisco
Co-authored papers 3
Tarun Gheyi
New York SGX Research Center for Structural Genomics
Co-authored papers 3
Christopher W Akey
Boston University, Chobanian and Avedisian School of Medicine
Co-authored papers 3
Shane Atwell
Lilly Research Laboratories
Co-authored papers 3
Devon A Thompson
Stanford University
Co-authored papers 3
J S Emtage
Co-authored papers 3
Ignacia Echeverria
University of California san francisco
Co-authored papers 3
Release 1.2