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Author Details

Akihiro Fujimoto
Graduate School of Medicine, The University of Tokyo
2007
65
27
PMIDPaper TitleJournal TitlePublished Year
36048238Comprehensive analysis of microsatellite polymorphisms in human populations.Hum Genet2023
37380713Narcolepsy type I-associated DNA methylation and gene expression changes in the human leukocyte antigen region.Sci Rep2023
37137205Development of a novel microarray data analysis tool without normalization for genotyping degraded forensic DNA.Forensic Sci Int Genet2023
37432452Long-read sequencing reveals the complex structure of extra dic(21;21) chromosome and its biological effects.Hum Genet2023
36902191Prediction Model with <i>HLA-A*33:03</i> Reveals Number of Days to Develop Liver Cancer from Blood Test.Int J Mol Sci2023
36458887Novel compound heterozygous mutations in UHRF1 are associated with atypical immunodeficiency, centromeric instability and facial anomalies syndrome with distinctive genome-wide DNA hypomethylation.Hum Mol Genet2023
36895025Localized assembly for long reads enables genome-wide analysis of repetitive regions at single-base resolution in human genomes.Hum Genomics2023
35926060Comprehensive analysis of full-length transcripts reveals novel splicing abnormalities and oncogenic transcripts in liver cancer.PLoS Genet2022
35710107Likely pathogenic structural variants in genetically unsolved patients with retinitis pigmentosa revealed by long-read sequencing.J Med Genet2022
35987117Practical forensic use of kinship determination using high-density SNP profiling based on a microarray platform, focusing on low-quantity DNA.Forensic Sci Int Genet2022
32915189Simultaneous Discordant B-Lymphoblastic Lymphoma and Follicular Lymphoma.Am J Clin Pathol2021
33910608Whole-genome sequencing with long reads reveals complex structure and origin of structural variation in human genetic variations and somatic mutations in cancer.Genome Med2021
33666656Impact of event-free survival status after stem cell transplantation on subsequent survival of patients with lymphoma.Blood Adv2021
34526361Clinical Impact of Detecting Low-Frequency Variants in Cell-Free DNA on Treatment of Castration-Resistant Prostate Cancer.Clin Cancer Res2021
34344966Immunogenomic pan-cancer landscape reveals immune escape mechanisms and immunoediting histories.Sci Rep2021
33978893Characterization of intermediate-sized insertions using whole-genome sequencing data and analysis of their functional impact on gene expression.Hum Genet2021
32113157Classification of primary liver cancer with immunosuppression mechanisms and correlation with genomic alterations.EBioMedicine2020
31953867Low incidence of posttransplant lymphoproliferative disorder after allogeneic stem cell transplantation in patients with lymphoma treated with rituximab.Hematol Oncol2020
33253153Systematic clustering algorithm for chromatin accessibility data and its application to hematopoietic cells.PLoS Comput Biol2020
33247206Aberrant (pro)renin receptor expression induces genomic instability in pancreatic ductal adenocarcinoma through upregulation of SMARCA5/SNF2H.Commun Biol2020
32617189Whole genome sequencing analysis identifies recurrent structural alterations in esophageal squamous cell carcinoma.PeerJ2020
32815153Multiregional whole-genome sequencing of hepatocellular carcinoma with nodule-in-nodule appearance reveals stepwise cancer evolution.J Pathol2020
29605648Genome sequencing analysis of liver cancer for precision medicine.Semin Cancer Biol2019
31641155eVIDENCE: a practical variant filtering for low-frequency variants detection in cell-free DNA.Sci Rep2019
31340865Identification of intermediate-sized deletions and inference of their impact on gene expression in a human population.Genome Med2019
30858508Clinical utility of androgen receptor gene aberrations in circulating cell-free DNA as a biomarker for treatment of castration-resistant prostate cancer.Sci Rep2019
30794929Risk Factors and Predictive Scoring System For Post-Transplant Lymphoproliferative Disorder after Hematopoietic Stem Cell Transplantation.Biol Blood Marrow Transplant2019
28991249Donor cell-derived transient abnormal myelopoiesis as a specific complication of umbilical cord blood transplantation.Bone Marrow Transplant2018
29970886Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis.Sci Rep2018
29969170Whole genome sequencing and mutation rate analysis of trios with paternal dioxin exposure.Hum Mutat2018
29861854Characterization of HBV integration patterns and timing in liver cancer and HBV-infected livers.Oncotarget2018
29899848Loss-of-function mutations in Zn-finger DNA-binding domain of <i>HNF4A</i> cause aberrant transcriptional regulation in liver cancer.Oncotarget2018
30167096Correction: Characterization of HBV integration patterns and timing in liver cancer and HBV-infected livers.Oncotarget2018
30477169Whole Genome Sequencing of a Vietnamese Family from a Dioxin Contamination Hotspot Reveals Novel Variants in the Son with Undiagnosed Intellectual Disability.Int J Environ Res Public Health2018
29360550Genomic characterization of biliary tract cancers identifies driver genes and predisposing mutations.J Hepatol2018
29618752IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis.Sci Rep2018
27742377Whole genome sequencing discriminates hepatocellular carcinoma with intrahepatic metastasis from multi-centric tumors.J Hepatol2017
29416670Genomic landscape of colitis-associated cancer indicates the impact of chronic inflammation and its stratification by mutations in the Wnt signaling.Oncotarget2017
28961930A Highly Specific Genome-Wide Association Study Integrated with Transcriptome Data Reveals the Contribution of Copy Number Variations to Specialized Metabolites in Arabidopsis thaliana Accessions.Mol Biol Evol2017
28924082Analysis of Cleaning Process for Several Kinds of Soil by Probability Density Functional Method.J Oleo Sci2017
27064257Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer.Nat Genet2016
27811275Mutational signatures associated with tobacco smoking in human cancer.Science2016
27230686Erratum: Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer.Nat Genet2016
27225414Systematic analysis of mutation distribution in three dimensional protein structures identifies cancer driver genes.Sci Rep2016
25823020Cancer whole-genome sequencing: present and future.Oncogene2015
28210698Circulating Tumor DNA Analysis for Liver Cancers and Its Usefulness as a Liquid Biopsy.Cell Mol Gastroenterol Hepatol2015
26647970A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing.Nat Commun2015
26132555Exome Analyses of Long QT Syndrome Reveal Candidate Pathogenic Mutations in Calmodulin-Interacting Genes.PLoS One2015
25636086Whole-genome mutational landscape of liver cancers displaying biliary phenotype reveals hepatitis impact and molecular diversity.Nat Commun2015
24758583Human genetic research, race, ethnicity and the labeling of populations: recommendations based on an interdisciplinary workshop in Japan.BMC Med Ethics2014
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Collaborators

Hidewaki Nakagawa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 32
Tatsuhiko Tsunoda
The University of Tokyo
Co-authored papers 18
Satoru Miyano
Tokyo Medical and Dental University
Co-authored papers 17
Hiroko Tanaka
Tokyo Medical and Dental University
Co-authored papers 14
Katsushi Tokunaga
National Center for Global Health and Medicine
Co-authored papers 12
Michiaki Kubo
Co-authored papers 11
Tatsuhiro Shibata
Kurume University School of Medicine
Co-authored papers 5
Minae Kawashima
Database Center for Life Science
Co-authored papers 2
Kenjiro Kosaki
Center for Medical Genetics, Keio University School of Medicine
Co-authored papers 2
Seiya Imoto
Human Genome Center, The Institute of Medical Science, The University of Tokyo
Co-authored papers 2
Seishi Ogawa
Kyoto University
Co-authored papers 2
Peter J Campbell
Wellcome Sanger Institute
Co-authored papers 2
Yosuke Kawai
Research Institute, National Center for Global Health and Medicine
Co-authored papers 2
Yusuke Nakamura
Japanese Foundation for Cancer Research
Co-authored papers 2
Yutaka Suzuki
Co-authored papers 1
V??ctor Quesada
Instituto Universitario de Oncologia, Universidad de Oviedo
Co-authored papers 1
Lawrence Bower
Cancer Research UK Cambridge Institute, University of Cambridge
Co-authored papers 1
Paul T Spellman
Oregon Health & Science University Hospital.
Co-authored papers 1
Keiran Raine
Wellcome Sanger Institute
Co-authored papers 1
David Jones
Wellcome Sanger Institute
Co-authored papers 1
Rafael Vald??s-Mas
Weizmann Institute of Science
Co-authored papers 1
Jonathan Hinton
Inivata Ltd
Co-authored papers 1
Sean M Grimmond
The University of Melbourne
Co-authored papers 1
Robert E Denroche
Ontario Institute for Cancer Research
Co-authored papers 1
Kazuto Kato
Osaka University
Co-authored papers 1
Sigve Nakken
University of Oslo
Co-authored papers 1
John Zhang
Harvard Medical School
Co-authored papers 1
Sahil Seth
The University of Texas MD Anderson Cancer Center
Co-authored papers 1
Jaegil Kim
Co-authored papers 1
Christopher Previti
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