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Author Details

Francesco Beghini
University of Trento
2017
18
14
PMIDPaper TitleJournal TitlePublished Year
37141097MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice.Cell Rep2023
37768448Thermal Therapy Modulation of the Psoriasis-Associated Skin and Gut Microbiome.Dermatol Ther (Heidelb)2023
36109637Variability of strain engraftment and predictability of microbiome composition after fecal microbiota transplantation across different diseases.Nat Med2022
33432175Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals.Nat Med2021
34789871Reporting guidelines for human microbiome research: the STORMS checklist.Nat Med2021
34835287Commensal <i>Bifidobacterium</i> Strains Enhance the Efficacy of Neo-Epitope Based Cancer Vaccines.Vaccines (Basel)2021
32427907Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.Nat Commun2020
32174516How inoculation affects the development and the performances of microalgal-bacterial consortia treating real municipal wastewater.J Environ Manage2020
30661755Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle.Cell2019
31664237Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation.Nat Med2019
31883524Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel species.Genome Biol2019
31151886Sociodemographic variation in the oral microbiome.Ann Epidemiol2019
30936548Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation.Nat Med2019
31076212Tobacco exposure associated with oral microbiota oxygen utilization in the New York City Health and Nutrition Examination Study.Ann Epidemiol2019
30001516Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome.Cell Host Microbe2018
28649415Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis.NPJ Biofilms Microbiomes2017
28837129Large-scale comparative metagenomics of Blastocystis, a common member of the human gut microbiome.ISME J2017
29088129Accessible, curated metagenomic data through ExperimentHub.Nat Methods2017
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Collaborators

Nicola Segata
University of Trento
Co-authored papers 18
Edoardo Pasolli
University of Naples Federico II
Co-authored papers 11
Levi Waldron
City University of New York School of Public Health
Co-authored papers 7
Curtis Huttenhower
Broad Institute of MIT and Harvard
Co-authored papers 6
Audrey Renson
New York University Grossman School of Medicine
Co-authored papers 4
Heidi E Jones
City University of New York Institute of Implementation Science and Population Health
Co-authored papers 3
Georg Zeller
Max Planck Institute for Developmental Biology
Co-authored papers 3
Omry Koren
Bar-Ilan University
Co-authored papers 3
Maria Carmen Collado
Instituto de Agroquimica y Tecnologia de los Alimentos (IATA-CSIC)
Co-authored papers 3
Manimozhiyan Arumugam
Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen
Co-authored papers 3
Peer Bork
University of Wurzburg
Co-authored papers 3
Takuji Yamada
Tokyo Institute of Technology
Co-authored papers 3
Ludwig Geistlinger
Center for Computational Biomedicine, Harvard Medical School
Co-authored papers 3
Tatsuhiro Shibata
Kurume University School of Medicine
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Chloe Mirzayi
City University of New York School of Public Health
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Lorna E Thorpe
NYU Grossman School of Medicine
Co-authored papers 2
Rob Knight
University of California
Co-authored papers 2
Harry Sokol
Paris Center for Microbiome Medicine
Co-authored papers 2
Jo??o C Setubal
Chemistry Institute, Universidade de Sao Paulo - USP
Co-authored papers 2
Emmanuel Dias-Neto
A.C. Camargo Cancer Center
Co-authored papers 2
Andre Franke
Institute of Clinical Molecular Biology, Kiel University
Co-authored papers 1
Wendell D Jones
Department of Bioinformatics and Clinical Systems
Co-authored papers 1
Francine Z Marques
Monash University
Co-authored papers 1
Ana M Valdes
University of Nottingham
Co-authored papers 1
Suzanne Devkota
David Geffen School of Medicine, University of California Los Angeles
Co-authored papers 1
Tim D Spector
King's College London
Co-authored papers 1
Mingyu Zhang
Johns Hopkins Bloomberg School of Public Health
Co-authored papers 1
Anthony A Fodor
University of North Carolina at Charlotte
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Noel T Mueller
Johns Hopkins Bloomberg School of Public Health
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Release 1.2