Author details

Full Name

Hiroki R Ueda

Affiliation

ORCID

Career Start Year

2001

Papers

141

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36735498	CCPG1 recognizes endoplasmic reticulum luminal proteins for selective ER-phagy.		2023
37566136	Correction to: Elucidation of the mechanism of amyloid A and transthyretin formation using mass spectrometry-based absolute quantification.		2023
37769257	Circadian ribosome profiling reveals a role for the <i>Period2</i> upstream open reading frame in sleep.	Proc Natl Acad Sci U S A	2023
36909280	A growing understanding of the role of muscarinic receptors in the molecular pathology and treatment of schizophrenia.		2023
37452846	Elucidation of the mechanism of amyloid A and transthyretin formation using mass spectrometry-based absolute quantification.		2023
34806788	The circadian clock ticks in organoids.	EMBO Journal	2022
36044902	Ubiquitination of phosphatidylethanolamine in organellar membranes.	Molecular Cell	2022
35835392	A Novel Three-Dimensional Imaging System Based on Polysaccharide Staining for Accurate Histopathological Diagnosis of Inflammatory Bowel Diseases.	Cellular and Molecular Gastroenterology and Hepatology	2022
35417087	Phosphorylation by casein kinase 2 enhances the interaction between ER-phagy receptor TEX264 and ATG8 proteins.	EMBO Reports	2022
35545715	A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues.	Nat Methods	2022
36194579	Distinct phosphorylation states of mammalian CaMKIIÎ² control the induction and maintenance of sleep.	PLoS Biology	2022
36618010	The role of calcium and CaMKII in sleep.		2022
35302893	The 103,200-arm acceleration dataset in the UK Biobank revealed a landscape of human sleep phenotypes.	Proceedings of the National Academy of Sciences of the United States of America	2022
35137623	High-throughput Genetically Modified Animal Experiments Achieved by Next-generation Mammalian Genetics.	Journal of Biological Rhythms	2022
35059031	Towards organism-level systems biology by next-generation genetics and whole-organ cell profiling.	Biophysical Reviews	2021
35475238	CUBIC-Cloud provides an integrative computational framework toward community-driven whole-mouse-brain mapping.	Cell Reports Methods	2021
34078910	NEK9 regulates primary cilia formation by acting as a selective autophagy adaptor for MYH9/myosin IIA.	Nature Communications	2021
33674758	Whole-organ analysis of TGF-Î²-mediated remodelling of the tumour microenvironment by tissue clearing.	Communications Biology	2021
34260913	Mechanical load regulates bone growth via periosteal Osteocrin.	Cell Rep	2021
34145937	Visualization of the cancer cell cycle by tissue-clearing technology using the Fucci reporter system.	Cancer Science	2021
33875568	Activation of Sympathetic Signaling in Macrophages Blocks Systemic Inflammation and Protects against Renal Ischemia-Reperfusion Injury.	Journal of the American Society of Nephrology : JASN	2021
33558489	Malignant subclone drives metastasis of genetically and phenotypically heterogenous cell clusters through fibrotic niche generation.	Nature Communications	2021
33437934	A design principle for posttranslational chaotic oscillators.	iScience	2021
35128463	TISSUE CLEARING.	Nat Rev Methods Primers	2021
32609750	Mass spectrometry-based absolute quantification of amyloid proteins in pathology tissue specimens: Merits and limitations.	PLoS ONE	2020
32380050	Whole-Brain Profiling of Cells and Circuits in Mammals by Tissue Clearing and Light-Sheet Microscopy.	Neuron	2020
31896771	Tissue clearing and its applications in neuroscience.	Nat Rev Neurosci	2020
32107377	Visualization and molecular characterization of whole-brain vascular networks with capillary resolution.	Nature Communications	2020
32341345	Versatile whole-organ/body staining and imaging based on electrolyte-gel properties of biological tissues.	Nature Communications	2020
32152524	Publisher Correction: Tissue clearing and its applications in neuroscience.	Nat Rev Neurosci	2020
32482797	A cellular model of albumin endocytosis uncovers a link between membrane and nuclear proteins.	Journal of Cell Science	2020
33377085	Protocol for Imaging and Analysis of Mouse Tumor Models with CUBIC Tissue Clearing.	STAR Protocols	2020
33181472	Generation of gene-corrected iPSCs line (KEIUi001-A) from a PARK8 patient iPSCs with familial Parkinson's disease carrying the I2020T mutation in LRRK2.	Stem Cell Research	2020
33123055	Phosphorylation Hypothesis of Sleep.	Frontiers in Psychology	2020
33012292	Rapid and easy-to-use ES cell manipulation device with a small groove near culturing wells.	BMC Research Notes	2020
32949498	Generation of a p16 Reporter Mouse and Its Use to Characterize and Target p16<sup>high</sup> Cells InÂ Vivo.	Cell Metab	2020
31155155	Novel 3D analysis using optical tissue clearing documents the evolution of murine rapidly progressive glomerulonephritis.	Kidney Int	2019
31748753	Advanced CUBIC tissue clearing for whole-organ cell profiling.		2019
31597873	A Microfluidic Platform Based on Robust Gas and Liquid Exchange for Long-term Culturing of Explanted Tissues.	Analytical Sciences	2019
32009883	Molecular Mechanisms of REM Sleep.	Frontiers in Neuroscience	2019
31031966	A period without PER: understanding 24-hour rhythms without classic transcription and translation feedback loops.	F1000Research	2019
30979565	Comprehensive three-dimensional analysis (CUBIC-kidney) visualizes abnormal renal sympathetic nerves after ischemia/reperfusion injury.	Kidney International	2019
30954899	Next-generation human genetics for organism-level systems biology.	Current Opinion in Biotechnology	2019
29402915	Amnionless-mediated glycosylation is crucial for cell surface targeting of cubilin in renal and intestinal cells.	Scientific Reports	2018
29038116	Design Principles of Phosphorylation-Dependent Timekeeping in Eukaryotic Circadian Clocks.	Cold Spring Harbor perspectives in biology	2018
30224462	Leak potassium channels regulate sleep duration.	Proceedings of the National Academy of Sciences of the United States of America	2018
30157420	Muscarinic Acetylcholine Receptors Chrm1 and Chrm3 Are Essential for REM Sleep.	Cell Rep	2018
30249605	Lost in clocks: non-canonical circadian oscillation discovered in cells.	Molecular Systems Biology	2018
30381424	Whole-Brain Analysis of Cells and Circuits by Tissue Clearing and Light-Sheet Microscopy.	J Neurosci	2018
30231034	Easy and efficient production of completely embryonic-stem-cell-derived mice using a micro-aggregation device.	PLoS ONE	2018