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Author Details

Gary Siuzdak
Scripps Center for Metabolomics and Mass Spectrometry, The Scripps Research Institute
1993
205
74
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36755131Quantitative multiple fragment monitoring with enhanced in-source fragmentation/annotation mass spectrometry.Nat Protoc2023
37467751Hydroxyproline metabolism enhances IFN-γ-induced PD-L1 expression and inhibits autophagic flux.Cell Chem Biol2023
36572723Mixed heavy metal stress induces global iron starvation response.ISME J2023
36755131Quantitative multiple fragment monitoring with enhanced in-source fragmentation/annotation mass spectrometry.Nat Protoc2023
36543939Guiding the choice of informatics software and tools for lipidomics research applications.Nat Methods2023
36984873Changes in Plasma Metabolic Signature upon Acute and Chronic Morphine Administration in Morphine-Tolerant Mice.Metabolites2023
36984873Changes in Plasma Metabolic Signature upon Acute and Chronic Morphine Administration in Morphine-Tolerant Mice.Metabolites2023
37467751Hydroxyproline metabolism enhances IFN-γ-induced PD-L1 expression and inhibits autophagic flux.Cell Chem Biol2023
36543939Guiding the choice of informatics software and tools for lipidomics research applications.Nat Methods2023
36572723Mixed heavy metal stress induces global iron starvation response.ISME J2023
34986335Metabolite discovery: Biochemistry's scientific driver.Cell Metab2022
35835746Accelerated lysine metabolism conveys kidney protection in salt-sensitive hypertension.Nat Commun2022
35888769Microbial Metabolite 3-Indolepropionic Acid Mediates Immunosuppression.Metabolites2022
36005620Drug-Initiated Activity Metabolomics Identifies Myristoylglycine as a Potent Endogenous Metabolite for Human Brown Fat Differentiation.Metabolites2022
36445937VPS34-dependent control of apical membrane function of proximal tubule cells and nutrient recovery by the kidney.Sci Signal2022
34986335Metabolite discovery: Biochemistry's scientific driver.Cell Metab2022
35174708Neutral Loss Mass Spectral Data Enhances Molecular Similarity Analysis in METLIN.J Am Soc Mass Spectrom2022
35835746Accelerated lysine metabolism conveys kidney protection in salt-sensitive hypertension.Nat Commun2022
36445937VPS34-dependent control of apical membrane function of proximal tubule cells and nutrient recovery by the kidney.Sci Signal2022
35888769Microbial Metabolite 3-Indolepropionic Acid Mediates Immunosuppression.Metabolites2022
36005620Drug-Initiated Activity Metabolomics Identifies Myristoylglycine as a Potent Endogenous Metabolite for Human Brown Fat Differentiation.Metabolites2022
35174708Neutral Loss Mass Spectral Data Enhances Molecular Similarity Analysis in METLIN.J Am Soc Mass Spectrom2022
33027502LipidFinder 2.0: advanced informatics pipeline for lipidomics discovery applications.Bioinformatics2021
34239102Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices.Nat Methods2021
33483720Cognitive analysis of metabolomics data for systems biology.Nat Protoc2021
33563788Sulfur Metabolites Play Key System-Level Roles in Modulating Denitrification.mSystems2021
34313111Single Quadrupole Multiple Fragment Ion Monitoring Quantitative Mass Spectrometry.Anal Chem2021
33027502LipidFinder 2.0: advanced informatics pipeline for lipidomics discovery applications.Bioinformatics2021
34633184Proteomics with Enhanced In-Source Fragmentation/Annotation: Applying XCMS-EISA Informatics and Q-MRM High-Sensitivity Quantification.J Am Soc Mass Spectrom2021
34582249Metabolomics activity screening of T cell-induced colitis reveals anti-inflammatory metabolites.Sci Signal2021
34432491Deciphering Microbial Metal Toxicity Responses via Random Bar Code Transposon Site Sequencing and Activity-Based Metabolomics.Appl Environ Microbiol2021
33483720Cognitive analysis of metabolomics data for systems biology.Nat Protoc2021
33563788Sulfur Metabolites Play Key System-Level Roles in Modulating Denitrification.mSystems2021
34432491Deciphering Microbial Metal Toxicity Responses via Random Bar Code Transposon Site Sequencing and Activity-Based Metabolomics.Appl Environ Microbiol2021
34582249Metabolomics activity screening of T cell-induced colitis reveals anti-inflammatory metabolites.Sci Signal2021
34633184Proteomics with Enhanced In-Source Fragmentation/Annotation: Applying XCMS-EISA Informatics and Q-MRM High-Sensitivity Quantification.J Am Soc Mass Spectrom2021
34239102Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices.Nat Methods2021
34313111Single Quadrupole Multiple Fragment Ion Monitoring Quantitative Mass Spectrometry.Anal Chem2021
32242660Enhanced in-Source Fragmentation Annotation Enables Novel Data Independent Acquisition and Autonomous METLIN Molecular Identification.Anal Chem2020
31953817METLIN: A Tandem Mass Spectral Library of Standards.Methods Mol Biol2020
31953810Metabolomics Data Processing Using XCMS.Methods Mol Biol2020
32242660Enhanced in-Source Fragmentation Annotation Enables Novel Data Independent Acquisition and Autonomous METLIN Molecular Identification.Anal Chem2020
32900879Metabolic adaptation to calorie restriction.Sci Signal2020
32839599METLIN MS<sup>2</sup> molecular standards database: a broad chemical and biological resource.Nat Methods2020
35190800Cloud-based archived metabolomics data: A resource for in-source fragmentation/annotation, meta-analysis and systems biology.Anal Sci Adv2020
35190800Cloud-based archived metabolomics data: A resource for in-source fragmentation/annotation, meta-analysis and systems biology.Anal Sci Adv2020
31953817METLIN: A Tandem Mass Spectral Library of Standards.Methods Mol Biol2020
31953810Metabolomics Data Processing Using XCMS.Methods Mol Biol2020
32900879Metabolic adaptation to calorie restriction.Sci Signal2020
32839599METLIN MS<sup>2</sup> molecular standards database: a broad chemical and biological resource.Nat Methods2020
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Collaborators

Hilary P Benton
Scripps Center for Metabolomics and Mass Spectrometry, The Scripps Research Institute
Co-authored papers 33
Gary J Patti
Co-authored papers 29
Julijana Ivanisevic
University of Lausanne
Co-authored papers 23
Caroline H Johnson
Yale School of Public Health
Co-authored papers 23
Duane Rinehart
Scripps Center for Metabolomics, The Scripps Research Institute
Co-authored papers 16
Trent R Northen
Co-authored papers 12
Mingliang Fang
Nanyang Technological University, Fudan University
Co-authored papers 12
Erica M Forsberg
Viral Information Institute, San Diego State University
Co-authored papers 11
Amelia Palermo
Co-authored papers 10
Zhouxin Shen
Co-authored papers 10
Benjamin F Cravatt
Scripps Research Institute
Co-authored papers 10
Michael W W Adams
University of Georgia
Co-authored papers 10
Aries Aisporna
Scripps Center for Metabolomics and Mass Spectrometry, The Scripps Research Institute
Co-authored papers 9
Farris L Poole
University of Georgia
Co-authored papers 9
Tao Huan
University of British Columbia
Co-authored papers 9
Martin Friedlander
the Scripps Research Institute
Co-authored papers 8
Markus M Rinschen
Co-authored papers 8
Michael P Thorgersen
University of Georgia
Co-authored papers 7
Howard S Fox
University of Nebraska Medical Center
Co-authored papers 7
Howard E Gendelman
Co-authored papers 6
Edith Aguilar
the Scripps Research Institute
Co-authored papers 5
Luke L Lairson
The Scripps Research Institute
Co-authored papers 5
Matthew W Fields
Center for Biofilm Engineering (CBE), Montana State University
Co-authored papers 5
Jon A Gangoiti
University of California
Co-authored papers 3
Adam M Deutschbauer
Lawrence Berkeley National Laboratory
Co-authored papers 3
Nitin S Baliga
Institute for Systems Biology
Co-authored papers 3
Paul D Robbins
University of Minnesota
Co-authored papers 3
Bruce A Barshop
University of California San Diego
Co-authored papers 3
Adam P Arkin
Lawrence Berkeley National Laboratory
Co-authored papers 3
Benjamin P Bowen
Co-authored papers 3
Release 1.2