Author details

Full Name

Beth Shapiro

Affiliation

ORCID

Career Start Year

2002

Papers

175

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36991555	Remembering distinguished professor Robert K. Wayne.	Mol Ecol	2023
36099176	A reference genome assembly of the declining tricolored blackbird, Agelaius tricolor.	Journal of Heredity	2023
37955570	Delayed postglacial colonization of in Iceland and the circum North Atlantic.		2023
37260085	A method to generate capture baits for targeted sequencing.		2023
36996225	Early dispersal of domestic horses into the Great Plains and northern Rockies.		2023
37104599	Evolutionary constraint and innovation across hundreds of placental mammals.	Science	2023
35137061	Genome Sequencing of a Gray Wolf from Peninsular India Provides New Insights into the Evolution and Hybridization of Gray Wolves.	Genome Biology and Evolution	2022
35395669	Landscape Genomics to Enable Conservation Actions: The California Conservation Genomics Project.	Journal of Heredity	2022
35711062	A polar bear paleogenome reveals extensive ancient gene flow from polar bears into brown bears.	Nature Ecology and Evolution	2022
35709290	Glacial ice supports a distinct and undocumented polar bear subpopulation persisting in late 21st-century sea-ice conditions.	Science	2022
35768506	Grey wolf genomic history reveals a dual ancestry of dogs.	Nature	2022
35567593	A Draft Reference Genome Assembly of the Critically Endangered Black Abalone, Haliotis cracherodii.	Journal of Heredity	2022
36074859	The genomic history and global expansion of domestic donkeys.	Science	2022
36136001	Seizing the moment: The opportunity and relevance of the California Conservation Genomics Project to state and federal conservation policy.	Journal of Heredity	2022
35862547	Reference genomes for conservation.	Science	2022
35042801	Why sequence all eukaryotes?	Proc Natl Acad Sci U S A	2022
35119923	Genomic basis for skin phenotype and cold adaptation in the extinct Steller's sea cow.	Science advances	2022
34824788	Revisiting the effect of PCR replication and sequencing depth on biodiversity metrics in environmental DNA metabarcoding.	Ecology and Evolution	2021
34130700	Large-scale genomic analysis reveals the genetic cost of chicken domestication.	BMC Biol	2021
33971056	Ancient horse genomes reveal the timing and extent of dispersals across the Bering Land Bridge.	Molecular Ecology	2021
33911273	Towards complete and error-free genome assemblies of all vertebrate species.	Nature	2021
34013632	Landscape analyses using eDNA metabarcoding and Earth observation predict community biodiversity in California.	Ecological Applications	2021
33851162	A new SARS-CoV-2 lineage that shares mutations with known Variants of Concern is rejected by automated sequence repository quality control.	bioRxiv	2021
33574182	Reintroduction of the archaic variant of <i>NOVA1</i> in cortical organoids alters neurodevelopment.	Science	2021
34272242	An ancestral recombination graph of human, Neanderthal, and Denisovan genomes.	Science advances	2021
33882130	An Annotated Draft Genome for the Andean Bear, Tremarctos ornatus.	Journal of Heredity	2021
33833441	Author Correction: Dense sampling of bird diversity increases power of comparative genomics.	Nature	2021
33878301	Environmental genomics of Late Pleistocene black bears and giant short-faced bears.	Curr Biol	2021
33723011	Ancient plant DNA reveals High Arctic greening during the Last Interglacial.	Proceedings of the National Academy of Sciences of the United States of America	2021
33768239	A Fast and Efficient Single-stranded Genomic Library Preparation Method Optimized for Ancient DNA.	Journal of Heredity	2021
33442059	Dire wolves were the last of an ancient New World canid lineage.	Nature	2021
33649544	Conserving intraspecific variation for nature's contributions to people.	Nature Ecology and Evolution	2021
33597750	Million-year-old DNA sheds light on the genomic history of mammoths.	Nature	2021
33438035	A Reference Genome Assembly of Simmental Cattle, Bos taurus taurus.	Journal of Heredity	2021
33595645	A Reference Genome Assembly of American Bison, Bison bison bison.	Journal of Heredity	2021
33434506	Heterogeneous Hunter-Gatherer and Steppe-Related Ancestries in Late Neolithic and Bell Beaker Genomes from Present-Day France.	Current Biology	2021
34671162	The origins and spread of domestic horses from the Western Eurasian steppes.	Nature	2021
34555285	Museum Genomics.	Annual Review of Genetics	2021
34385399	Lifetime mobility of an Arctic woolly mammoth.	Science	2021
34436588	Erratum to: A Reference Genome Assembly of Simmental Cattle, Bos taurus taurus.	Journal of Heredity	2021
34433011	Ancient and modern genomes unravel the evolutionary history of the rhinoceros family.	Cell	2021
33177665	Dense sampling of bird diversity increases power of comparative genomics.	Nature	2020
32378741	Rejoinder for discussion on "Horseshoe-based Bayesian nonparametric estimation of effective population size trajectories".	Biometrics	2020
32075743	An Evolutionary Insertion in the Mxra8 Receptor-Binding Site Confers Resistance to Alphavirus Infection and Pathogenesis.	Cell Host Microbe	2020
32112100	A novel NGS library preparation method to characterize native termini of fragmented DNA.	Nucleic Acids Research	2020
31869520	The case of an arctic wild ass highlights the utility of ancient DNA for validating problematic identifications in museum collections.	Molecular Ecology Resources	2020
32277713	Horseshoe-based Bayesian nonparametric estimation of effective population size trajectories.	Biometrics	2020
32384152	Ancient Hybridization with an Unknown Population Facilitated High-Altitude Adaptation of Canids.	Molecular Biology and Evolution	2020
32488006	Rapid range shifts and megafaunal extinctions associated with late Pleistocene climate change.	Nature Communications	2020
33250998	Ten strategies for a successful transition to remote learning: Lessons learned with a flipped course.	Ecology and Evolution	2020