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Author Details

Qi Ma
University of California
2007
23
19
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
32876528The DNA methyltransferase DNMT3A contributes to autophagy long-term memory.Autophagy2021
34040254Enhancer release and retargeting activates disease-susceptibility genes.Nature2021
33948580Analysis of Brugada syndrome loci reveals that fine-mapping clustered GWAS hits enhances the annotation of disease-relevant variants.Cell Rep Med2021
32320655Super-Enhancer Redistribution as a Mechanism of Broad Gene Dysregulation in Repeatedly Drug-Treated Cancer Cells.Cell Rep2020
30833784Phase separation of ligand-activated enhancers licenses cooperative chromosomal enhancer assembly.Nat Struct Mol Biol2019
31740836Chromatin establishes an immature version of neuronal protocadherin selection during the naive-to-primed conversion of pluripotent stem cells.Nat Genet2019
29263096Histone demethylase LSD1 regulates hematopoietic stem cells homeostasis and protects from death by endotoxic shock.Proc Natl Acad Sci U S A2018
30118678Dismissal of RNA Polymerase II Underlies a Large Ligand-Induced Enhancer Decommissioning Program.Mol Cell2018
29670286Pluripotency factors functionally premark cell-type-restricted enhancers in ES cells.Nature2018
28864529Thyroid hormone receptor beta and NCOA4 regulate terminal erythrocyte differentiation.Proc Natl Acad Sci U S A2017
28297710Corrigendum: The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy.Nature2017
28475868Glucocorticoid Receptor:MegaTrans Switching Mediates the Repression of an ERα-Regulated Transcriptional Program.Mol Cell2017
25892301LRP8-Reelin-Regulated Neuronal Enhancer Signature Underlying Learning and Memory Formation.Neuron2015
27066173Genome-wide epigenetic analysis of MEF2A and MEF2C transcription factors in mouse cortical neurons.Commun Integr Biol2015
26166704Condensin I and II Complexes License Full Estrogen Receptor α-Dependent Enhancer Activation.Mol Cell2015
26214369LSD1n is an H4K20 demethylase regulating memory formation via transcriptional elongation control.Nat Neurosci2015
25119036Required enhancer-matrin-3 network interactions for a homeodomain transcription program.Nature2014
25303530Enhancer activation requires trans-recruitment of a mega transcription factor complex.Cell2014
23728302Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation.Nature2013
24360279Brd4 and JMJD6-associated anti-pause enhancers in regulation of transcriptional pause release.Cell2013
23863932The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy.Nature2013
22916103The protein architecture of human secretory vesicles reveals differential regulation of signaling molecule secretion by protein kinases.PLoS One2012
16841089HIV-1 coreceptors CCR5 and CXCR4 both mediate neuronal cell death but CCR5 paradoxically can also contribute to protection.Cell Death Differ2007
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Collaborators

Michael G Rosenfeld
University of California San Diego
Co-authored papers 17
Daria Merkurjev
University of California
Co-authored papers 9
Feng Yang
Howard Hughes Medical Institute, University of California San Diego
Co-authored papers 5
Ivan Garcia-Bassets
Co-authored papers 4
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Center for Translational Vision Research
Co-authored papers 2
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University of California San Diego
Co-authored papers 2
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986th Hospital of Air Force
Co-authored papers 2
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Co-authored papers 1
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The Scripps Research Institute, University of California
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Amalio Telenti
Vir Biotechnology Inc.
Co-authored papers 1
Sara Pagans
University of Girona
Co-authored papers 1
M Inmaculada Barrasa
Co-authored papers 1
Dario Meluzzi
University of California San Diego
Co-authored papers 1
Laurent Taupenot
VA San Diego Healthcare System, University of California at San Diego
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Vivian Hook
Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California
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Jill L Wegrzyn
University of Connecticut
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Michael Smoot
University of California
Co-authored papers 1
Kelly A Frazer
University of California, USA Institute for Genomic Medicine
Co-authored papers 1
Dylan Skola
University of San Diego
Co-authored papers 1
Zhengdong D Zhang
Co-authored papers 1
Kaoru Saijo
Helen Wills Neuroscience Institute, University of California berkeley
Co-authored papers 1
Steven J Bark
University of Houston
Co-authored papers 1
Daniel T O'Connor
Institute for Genomic Medicine, University of California San Diego
Co-authored papers 1
Michael G Ziegler
University of California San Diego School of Medicine
Co-authored papers 1
Trey Ideker (CM4AI)
University of California San Diego
Co-authored papers 1
Lawrence S B Goldstein
university of california san diego
Co-authored papers 1
Release 1.2