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Author Details

Shantao Li
Yale University
2015
18
13
PMIDPaper TitleJournal TitlePublished Year
34724198Fumarate hydratase variant prevalence and manifestations among individuals receiving germline testing.Cancer2022
33902690Whole-genome sequencing of phenotypically distinct inflammatory breast cancers reveals similar genomic alterations to non-inflammatory breast cancers.Genome Med2021
33568750Molecular medicine tumor board: whole-genome sequencing to inform on personalized medicine for a man with advanced prostate cancer.Prostate Cancer Prostatic Dis2021
32413184Estimation of the carrier frequency of fumarate hydratase alterations and implications for kidney cancer risk in hereditary leiomyomatosis and renal cancer.Cancer2020
32084333Passenger Mutations in More Than 2,500 Cancer Genomes: Overall Molecular Functional Impact and Consequences.Cell2020
32917868Predicting the frequencies of drug side effects.Nat Commun2020
32973096Deep profiling of protease substrate specificity enabled by dual random and scanned human proteome substrate phage libraries.Proc Natl Acad Sci U S A2020
32681003Using sigLASSO to optimize cancer mutation signatures jointly with sampling likelihood.Nat Commun2020
32728046An integrative ENCODE resource for cancer genomics.Nat Commun2020
31142351Genomics and data science: an application within an umbrella.Genome Biol2019
28662076Landscape and variation of novel retroduplications in 26 human populations.PLoS Comput Biol2017
28358873Whole-genome analysis of papillary kidney cancer finds significant noncoding alterations.PLoS Genet2017
27009100The real cost of sequencing: scaling computation to keep pace with data generation.Genome Biol2016
26657727Understanding genome structural variations.Oncotarget2016
27125642Erratum to: The real cost of sequencing: scaling computation to keep pace with data generation.Genome Biol2016
27066750Identifying Allosteric Hotspots with Dynamics: Application to Inter- and Intra-species Conservation.Structure2016
26028266Analysis of deletion breakpoints from 1,092 humans reveals details of mutation mechanisms.Nat Commun2015
26346554Erratum: analysis of deletion breakpoints from 1,092 humans reveals details of mutation mechanisms.Nat Commun2015
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Collaborators

Mark Gerstein
Yale University
Co-authored papers 16
Shaoke Lou
Co-authored papers 4
Alexej Abyzov
Co-authored papers 4
Joel Rozowsky
Co-authored papers 4
Jing Zhang
Co-authored papers 3
Sushant Kumar
Co-authored papers 3
Patrick McGillivray
Johns Hopkins University School of Medicine
Co-authored papers 3
Brian Shuch
University of California los angeles
Co-authored papers 3
Daifeng Wang
University of Wisconsin-Madison
Co-authored papers 3
Arif Harmanci
The University of Texas Health Science Center at Houston
Co-authored papers 3
Matthew E Hurles
Wellcome Sanger Institute
Co-authored papers 2
Adrian M St??tz
St. Anna Children's Cancer Research Institute (CCRI)
Co-authored papers 2
Declan Clarke
Co-authored papers 2
George M Weinstock
The Genome Center at Washington University, Washington University School of Medicine
Co-authored papers 2
Jan O Korbel
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 2
Wyatt T Clark
BioMarin Pharmaceutical Inc.
Co-authored papers 2
Mengting Gu
Co-authored papers 2
Jonathan Warrell
Co-authored papers 2
Lucas Lochovsky
Co-authored papers 2
Blake R Wilde
University of California los angeles
Co-authored papers 1
Gad Getz
Broad Institute of the Massachusetts Institute of Technology and Harvard
Co-authored papers 1
Keith Nykamp
Co-authored papers 1
James Zou
Stanford University
Co-authored papers 1
Sarah M Nielsen
Invitae Corporation
Co-authored papers 1
Edward D Esplin
Invitae Corporation
Co-authored papers 1
James M Reuben
The University of Texas MD Anderson Cancer Center
Co-authored papers 1
Jakob Skou Pedersen
Co-authored papers 1
Kathryn E Hatchell
Invitae Corporation
Co-authored papers 1
Mark A Rubin
University of Bern
Co-authored papers 1
James A Wells
Department of Pharmaceutical Chemistry, University of California San Francisco
Co-authored papers 1
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