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Author Details

Hui Yu
Sylvester Comprehensive Cancer Center, University of Miami
2017
41
10
PMIDPaper TitleJournal TitlePublished Year
36355452CoMutDB: the landscape of somatic mutation co-occurrence in cancers.Bioinformatics2023
38022689Pan-cancer mutational signature surveys correlated mutational signature with geospatial environmental exposures and viral infections.Comput Struct Biotechnol J2023
37860228Mutation density analyses on long noncoding RNA reveal comparable patterns to protein-coding RNA and prognostic value.Comput Struct Biotechnol J2023
37624931Somatic mutation effects diffused over microRNA dysregulation.Bioinformatics2023
37032811Modeling the relationship between gene expression and mutational signature.Quant Biol2023
36865271Arsenic is a potent co-mutagen of ultraviolet light.bioRxiv2023
34606615SBSA: an online service for somatic binding sequence annotation.Nucleic Acids Res2022
35627247A Novel Strategy to Identify Prognosis-Relevant Gene Sets in Cancers.Genes (Basel)2022
36100435Surveying mutation density patterns around specific genomic features.Genome Res2022
35985010Genomic Variants Disrupt miRNA-mRNA Regulation.Chem Biodivers2022
35885993Drug-Target Network Study Reveals the Core Target-Protein Interactions of Various COVID-19 Treatments.Genes (Basel)2022
35300047GTQC: Automated Genotyping Array Quality Control and Report.J Genomics2022
35053577Comprehensive Analysis of Co-Mutations Identifies Cooperating Mechanisms of Tumorigenesis.Cancers (Basel)2022
35232614Is it time to reassess variant annotation?Trends Genet2022
33945541MetaGSCA: A tool for meta-analysis of gene set differential coexpression.PLoS Comput Biol2021
33731963A streamlined solution for processing, elucidating and quality control of cyclobutane pyrimidine dimer sequencing data.Nat Protoc2021
34856998Conditional transcriptional relationships may serve as cancer prognostic markers.BMC Med Genomics2021
34562567EditPredict: Prediction of RNA editable sites with convolutional neural network.Genomics2021
34131696Predicting MHC class I binder: existing approaches and a novel recurrent neural network solution.Brief Bioinform2021
34097003Detecting SARS-CoV-2 and its variant strains with a full genome tiling array.Brief Bioinform2021
34319007RNA editing affects cis-regulatory elements and predicts adverse cancer survival.Cancer Med2021
33946654Rewired Pathways and Disrupted Pathway Crosstalk in Schizophrenia Transcriptomes by Multiple Differential Coexpression Methods.Genes (Basel)2021
30475999Cancer-specific expression quantitative loci are affected by expression dysregulation.Brief Bioinform2020
31930398AnnoGen: annotating genome-wide pragmatic features.Bioinformatics2020
33094288SMDB: pivotal somatic sequence alterations reprogramming regulatory cascades.NAR Cancer2020
32773169Alternative Applications of Genotyping Array Data Using Multivariant Methods.Trends Genet2020
32957963Expression correlation attenuates within and between key signaling pathways in chronic kidney disease.BMC Med Genomics2020
32161619Corrigendum: Genomic Positional Dissection of RNA Editomes in Tumor and Normal Samples.Front Genet2020
32511223Non-canonical RNA-DNA differences and other human genomic features are enriched within very short tandem repeats.PLoS Comput Biol2020
31588509MutEx: a multifaceted gateway for exploring integrative pan-cancer genomic data.Brief Bioinform2020
31607216Advancing Pan-cancer Gene Expression Survial Analysis by Inclusion of Non-coding RNA.RNA Biol2020
30590704beRBP: binding estimation for human RNA-binding proteins.Nucleic Acids Res2019
31807893Machine learning distilled metabolite biomarkers for early stage renal injury.Metabolomics2019
29902512Quality and concordance of genotyping array data of 12,064 samples from 5840 cancer patients.Genomics2019
30949194Genomic Positional Dissection of RNA Editomes in Tumor and Normal Samples.Front Genet2019
30832569Architectures and accuracy of artificial neural network for disease classification from omics data.BMC Genomics2019
30931940Identification of serum metabolites associating with chronic kidney disease progression and anti-fibrotic effect of 5-methoxytryptophan.Nat Commun2019
30596888Corrigendum to: Single-nucleotide variants in human RNA: RNA editing and beyond.Brief Funct Genomics2019
30312373Single-nucleotide variants in human RNA: RNA editing and beyond.Brief Funct Genomics2019
29320459The Landscape of Small Non-Coding RNAs in Triple-Negative Breast Cancer.Genes (Basel)2018
28131802Improvements and impacts of GRCh38 human reference on high throughput sequencing data analysis.Genomics2017
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Collaborators

David C Samuels
Vanderbilt University
Co-authored papers 14
Jeremy S Edwards
Co-authored papers 2
Yulin Dai
The University of Texas Health Science Center at Houston.
Co-authored papers 2
Xiangning Chen
Center for Precision Health, The University of Texas Health Science Center at Houston
Co-authored papers 1
Ludmil B Alexandrov
Moores Cancer Center, university of california san diego
Co-authored papers 1
Xiaoqian Jiang
Carnegie Mellon University, The University of Texas Health Science Center at Houston, University of California San Diego
Co-authored papers 1
Jennifer E Below
Vanderbilt Genetics Institute, Vanderbilt University Medical Center
Co-authored papers 1
Andi Liu
Center for Precision Health, The University of Texas Health Science Center at Houston
Co-authored papers 1
Zhongming Zhao
Center for Precision Health, The University of Texas Health Science Center at Houston
Co-authored papers 1
Qi Liu
Co-authored papers 1
Peilin Jia
Center for Precision Health, The University of Texas Health Science Center at Houston
Co-authored papers 1
Qiheng Yan
Center for Precision Health, The University of Texas Health Science Center at Houston
Co-authored papers 1
Bingrui Li
Metastasis Research Center, University of Texas MD Anderson Cancer Center
Co-authored papers 1
Yejin Kim
University of Texas Health Science Center at Houston
Co-authored papers 1
Yan-Mei Guo
The Sixth People's Hospital of Hebei Province
Co-authored papers 1
Wendao Liu
Center for Precision Health, The University of Texas Health Science Center at Houston
Co-authored papers 1
Zhongming Zhao
Center for Precision Health, The University of Texas Health Science Center at Houston
Co-authored papers 1
Jingchun Chen
Nevada Institute of Personalized Medicine, University of Nevada Las Vegas
Co-authored papers 1
Shuguang Leng
Co-authored papers 1
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