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Author Details

Arnaud Ceol
European Institute of Oncology IRCCS
2004
39
25
PMIDPaper TitleJournal TitlePublished Year
34927668TMBleR: a bioinformatic tool to optimize TMB estimation and predictive power.Bioinformatics2022
33642178Prospective Validation of the Italian Alliance Against Cancer Lung Panel in Patients With Advanced Non-Small-Cell Lung Cancer.Clin Lung Cancer2021
33076821Search and comparison of (epi)genomic feature patterns in multiple genome browser tracks.BMC Bioinformatics2020
30999855The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes.BMC Bioinformatics2019
29642841Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions.BMC Bioinformatics2018
26961139Genome and network visualization facilitates the analyses of the effects of drugs and mutations on protein-protein and drug-protein networks.BMC Bioinformatics2016
27200084Integrated Systems for NGS Data Management and Analysis: Open Issues and Available Solutions.Front Genet2016
26860319LowMACA: exploiting protein family analysis for the identification of rare driver mutations in cancer.BMC Bioinformatics2016
25719824dSysMap: exploring the edgetic role of disease mutations.Nat Methods2015
26209801The MI bundle: enabling network and structural biology in genome visualization tools.Bioinformatics2015
240815803did: a catalog of domain-based interactions of known three-dimensional structure.Nucleic Acids Res2014
25471934SMITH: a LIMS for handling next-generation sequencing workflows.BMC Bioinformatics2014
25519916The EHEC-host interactome reveals novel targets for the translocated intimin receptor.Sci Rep2014
24564446AnnotateGenomicRegions: a web application.BMC Bioinformatics2014
24561554The binary protein-protein interaction landscape of Escherichia coli.Nat Biotechnol2014
24627523A second-generation protein-protein interaction network of Helicobacter pylori.Mol Cell Proteomics2014
23399932Interactome3D: adding structural details to protein networks.Nat Methods2013
23896349Towards a detailed atlas of protein-protein interactions.Curr Opin Struct Biol2013
22618871NetAligner--a network alignment server to compare complexes, pathways and whole interactomes.Nucleic Acids Res2012
209659633did: identification and classification of domain-based interactions of known three-dimensional structure.Nucleic Acids Res2011
21716279PSICQUIC and PSISCORE: accessing and scoring molecular interactions.Nat Methods2011
21123182Identification of new substrates of the protein-tyrosine phosphatase PTP1B by Bayesian integration of proteome evidence.J Biol Chem2011
19897547MINT, the molecular interaction database: 2009 update.Nucleic Acids Res2010
20829821The FEBS Letters/BioCreative II.5 experiment: making biological information accessible.Nat Biotechnol2010
18974184VirusMINT: a viral protein interaction database.Nucleic Acids Res2009
19935838Recurated protein interaction datasets.Nat Methods2009
18328820Linking entries in protein interaction database to structured text: the FEBS Letters experiment.FEBS Lett2008
18834496MINT and IntAct contribute to the Second BioCreative challenge: serving the text-mining community with high quality molecular interaction data.Genome Biol2008
18472267Protein interactions: integration leads to belief.Trends Biochem Sci2008
18551417Searching the MINT database for protein interaction information.Curr Protoc Bioinformatics2008
18592188Searching the protein interaction space through the MINT database.Methods Mol Biol2008
17135199DOMINO: a database of domain-peptide interactions.Nucleic Acids Res2007
17925023Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions.BMC Biol2007
17893861Submit your interaction data the IMEx way: a step by step guide to trouble-free deposition.Proteomics2007
17687370The minimum information required for reporting a molecular interaction experiment (MIMIx).Nat Biotechnol2007
17135203MINT: the Molecular INTeraction database.Nucleic Acids Res2007
15763559Comparative interactomics.FEBS Lett2005
16351748HomoMINT: an inferred human network based on orthology mapping of protein interactions discovered in model organisms.BMC Bioinformatics2005
14755292The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data.Nat Biotechnol2004
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Collaborators

Gianni Cesareni
University of Rome 'Tor Vergata'
Co-authored papers 19
Andrew Chatr-Aryamontri
Institute for Research in Immunology and Cancer (IRIC), University of Montreal
Co-authored papers 15
Patrick Aloy
Institucio Catalana de Recerca i Estudis Avancats (ICREA)
Co-authored papers 9
Luana Licata
University of Tor Vergata
Co-authored papers 8
Henning Hermjakob
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 8
Lukasz Salwinski
university of california los angeles
Co-authored papers 7
Sandra Orchard
EMBL's European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 7
Samuel Kerrien
Ecole polytechnique federale de Lausanne (EPFL)
Co-authored papers 5
David Eisenberg
university of california los angeles
Co-authored papers 5
Peter Uetz
Center for the Study of Biological Complexity, Virginia Commonwealth University
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Gary D Bader
University of Toronto
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Marc Vidal
Blavatnik Institute, Harvard Medical School
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Rolf Apweiler
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Mike Tyers
Institute for Research in Immunology and Cancer (IRIC), Universite de Montreal
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Christopher W V Hogue
National University of Singapore
Co-authored papers 3
Roman Hauser
SSSSGerman Cancer Research Center
Co-authored papers 3
Ioannis Xenarios
University of Lausanne
Co-authored papers 3
Jyoti Khadake
Cambridge University and Cambridge University Hospitals NHS Foundation Trust
Co-authored papers 3
Stefan Wuchty
University of Miami
Co-authored papers 3
Javier De Las Rivas
Cancer Research Centre (IBMCC/CSIC/USAL/IBSAL)
Co-authored papers 3
Bruno Aranda
European Bioinformatics Institute
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Carlos Prieto
Hospital Rey Juan Carlos
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Michael K Gilson
University of California
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David J Lynn
South Australian Health and Medical Research Institute
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Alfonso Valencia
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Sylvie Ricard-Blum
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Release 1.2