Skip to Main Content

Author Details

Torsten Schwede
University of Basel
1999
116
55
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37465978Outer membrane β-barrel structure prediction through the lens of AlphaFold2.Proteins2024
36828268ModelCIF: An Extension of PDBx/mmCIF Data Representation for Computed Structure Models.J Mol Biol2023
37858934Assessment of the assessment-All about complexes.Proteins2023
37795762Assessment of protein-ligand complexes in CASP15.Proteins2023
37704037Uncovering new families and folds in the natural protein universe.Nature2023
37885318Automated benchmarking of combined protein structure and ligand conformation prediction.Proteins2023
37773046Epitope-engineered human hematopoietic stem cells are shielded from CD123-targeted immunotherapy.J Exp Med2023
37920879Critical assessment of methods of protein structure prediction (CASP)-Round XV.Proteins2023
37493353Protein target highlights in CASP15: Analysis of models by structure providers.Proteins2023
37306011New prediction categories in CASP15.Proteins2023
37365936Discriminating physiological from non-physiological interfaces in structures of protein complexes: A community-wide study.Proteomics2023
35974146INCATE: a partnership to boost the antibiotic pipeline.Nat Rev Drug Discov2022
364488473D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources.Gigascience2022
34069681Global Genomic Analysis of SARS-CoV-2 RNA Dependent RNA Polymerase Evolution and Antiviral Drug Resistance.Microorganisms2021
33507980ProMod3-A versatile homology modelling toolbox.PLoS Comput Biol2021
35072136GA4GH: International policies and standards for data sharing across genomic research and healthcare.Cell Genom2021
34882469Interactomes in the era of deep learning.Science2021
34561912Target highlights in CASP14: Analysis of models by structure providers.Proteins2021
34533838Critical assessment of methods of protein structure prediction (CASP)-Round XIV.Proteins2021
32708196A Comprehensive Mapping of the Druggable Cavities within the SARS-CoV-2 Therapeutically Relevant Proteins by Combining Pocket and Docking Searches as Implemented in Pockets 2.0.Int J Mol Sci2020
31697312QMEANDisCo-distance constraints applied on model quality estimation.Bioinformatics2020
32048708QMEANDisCo-distance constraints applied on model quality estimation.Bioinformatics2020
33184271Author Correction: High-resolution cryo-EM structure of urease from the pathogen Yersinia enterocolitica.Nat Commun2020
33037208High-resolution cryo-EM structure of urease from the pathogen Yersinia enterocolitica.Nat Commun2020
30298405Modeling of Protein Tertiary and Quaternary Structures Based on Evolutionary Information.Methods Mol Biol2019
31780431Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures.Structure2019
31589781Critical assessment of methods of protein structure prediction (CASP)-Round XIII.Proteins2019
31442339Target highlights in CASP13: Experimental target structures through the eyes of their authors.Proteins2019
31265154Estimation of model accuracy in CASP13.Proteins2019
31571280Introducing "best single template" models as reference baseline for the Continuous Automated Model Evaluation (CAMEO).Proteins2019
28833563Assessment of model accuracy estimations in CASP12.Proteins2018
29788355SWISS-MODEL: homology modelling of protein structures and complexes.Nucleic Acids Res2018
29082672Critical assessment of methods of protein structure prediction (CASP)-Round XII.Proteins2018
29178137Continuous Automated Model EvaluatiOn (CAMEO) complementing the critical assessment of structure prediction in CASP12.Proteins2018
28960539Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016).Proteins2018
29071742Assessment of protein assembly prediction in CASP12.Proteins2018
29067782A tribute to Anna Tramontano (1957-2017).Proteins2018
29159950Evaluation of the template-based modeling in CASP12.Proteins2018
27899672The SWISS-MODEL Repository-new features and functionality.Nucleic Acids Res2017
28219448A computational protocol to evaluate the effects of protein mutants in the kinase gatekeeper position on the binding of ATP substrate analogues.BMC Res Notes2017
28325767Cohesive Properties of the <i>Caulobacter crescentus</i> Holdfast Adhesin Are Regulated by a Novel c-di-GMP Effector Protein.mBio2017
28471426Anna Tramontano 1957-2017.Nat Struct Mol Biol2017
29254494Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework.Genome Med2017
28877501PDB-Dev: a Prototype System for Depositing Integrative/Hybrid Structural Models.Structure2017
288762352017 publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution: an update.Acta Crystallogr D Struct Biol2017
28874689Modeling protein quaternary structure of homo- and hetero-oligomers beyond binary interactions by homology.Sci Rep2017
27171127Critical assessment of methods of protein structure prediction: Progress and new directions in round XI.Proteins2016
26344049Methods of model accuracy estimation can help selecting the best models from decoy sets: Assessment of model accuracy estimations in CASP11.Proteins2016
26473983Some of the most interesting CASP11 targets through the eyes of their authors.Proteins2016
27684336Plasmid-mediated colistin resistance in a patient infected with Klebsiella pneumoniae.Lancet Infect Dis2016
  • 1 - 50 of 116

Recommended Authors

Neeladri Sen
Institute of Structural and Molecular Biology, University College London
Career Start Year 2017
Number of shared co-authors 8
Minkyung Baek
Seoul National University
Career Start Year 2016
Number of shared co-authors 20
Jinchao Yu
Institute for Integrative Biology of the Cell (I2BC), CNRS, Universite Paris-Saclay
Career Start Year 2015
Number of shared co-authors 17
Lim Heo
Michigan State University
Career Start Year 2011
Number of shared co-authors 22
Daniel B Roche
Universita degli Studi di Milano - Computer Science Department - AnacletoLab
Career Start Year 2010
Number of shared co-authors 20
Joan Segura
University of California San Diego
Career Start Year 2009
Number of shared co-authors 27
Ivan Anishchenko
University of Washington
Career Start Year 2009
Number of shared co-authors 22
Ezgi Karaca
Dokuz Eylul University
Career Start Year 2008
Number of shared co-authors 23
Mark N Wass
University of Kent
Career Start Year 2007
Number of shared co-authors 26
Guillaume Launay
CNRS UMR 5086 and Universite Claude Bernard Lyon 1
Career Start Year 2007
Number of shared co-authors 3
Domenico Cozzetto
Imperial College London
Career Start Year 2005
Number of shared co-authors 30
Dima Kozakov
Stony Brook University
Career Start Year 2005
Number of shared co-authors 24
Keehyoung Joo
Center for Advanced Computation, Korea Institute for Advanced Study
Career Start Year 2004
Number of shared co-authors 21
L??szl?? Kaj??n
TUM (Technische Universitat Munchen)
Career Start Year 2003
Number of shared co-authors 2
Narcis Fernandez-Fuentes
Institute of Biological, Aberystwyth University
Career Start Year 2002
Number of shared co-authors 19
Hao Fan
College of Biotechnology and Bioengineering, Zhejiang University of Technology
Career Start Year 2001
Number of shared co-authors 9
Jo??o P G L M Rodrigues
Stanford University
Career Start Year 1999
Number of shared co-authors 21
Volker A Eyrich
Columbia University
Career Start Year 1999
Number of shared co-authors 9
Chaok Seok
Seoul National University
Career Start Year 1998
Number of shared co-authors 31
Mallur S Madhusudhan
Indian Institute of Science Education and Research Pune
Career Start Year 1996
Number of shared co-authors 12
Kentaro Tomii
National Institute of Advanced Industrial Science and Technology (AIST)
Career Start Year 1996
Number of shared co-authors 17
Marc F Lensink
University Lille, CNRS
Career Start Year 1996
Number of shared co-authors 23
Lukasz Jaroszewski
University of California Riverside School of Medicine
Career Start Year 1995
Number of shared co-authors 13
Petras J Kundrotas
The University of Kansas
Career Start Year 1991
Number of shared co-authors 22
Baldo Oliva
Universitat Pompeu Fabra
Career Start Year 1991
Number of shared co-authors 4
Ram Samudrala
Jacobs School of Medicine and Biomedical Sciences, University at Buffalo
Career Start Year 1990
Number of shared co-authors 6
Paul A Bates
The Francis Crick Institute
Career Start Year 1989
Number of shared co-authors 22
Ruben Abagyan
Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California
Career Start Year 1981
Number of shared co-authors 3
Michael J E Sternberg
Imperial College London
Career Start Year 1976
Number of shared co-authors 29
Tom L Blundell
Heartand Lung Research Institute, University of Cambridge
Career Start Year 1971
Number of shared co-authors 13

Collaborators

Andriy Kryshtafovych
University of California davis
Co-authored papers 21
John Moult
Institute for Bioscience and Biotechnology Research
Co-authored papers 19
Krzysztof Fidelis
University of California davis
Co-authored papers 18
Juergen Haas
University of Basel
Co-authored papers 13
Gerardo Tauriello
University of Basel
Co-authored papers 12
Helen M Berman
The State University of New Jersey
Co-authored papers 12
John D Westbrook
The State University of New Jersey
Co-authored papers 11
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 8
Anna Tramontano
Sapienza University of Rome
Co-authored papers 8
Stefan Bienert
University of Basel
Co-authored papers 8
Stephen K Burley
The State University of New Jersey
Co-authored papers 7
Maya Topf
Leibniz-Institut fur Virologie (LIV)
Co-authored papers 7
Manuel C Peitsch
Philip Morris International Research Laboratories Pte. Ltd
Co-authored papers 6
Andrzej Joachimiak
Center for Structural Biology of Infectious Diseases, University of Chicago
Co-authored papers 6
Gaetano T Montelione
Rensselaer Polytechnic Institute
Co-authored papers 5
Rosalba Lepore
Basel University Hospital and University of Basel
Co-authored papers 5
Sameer Velankar
European Bioinformatics Institute
Co-authored papers 5
Dmitri I Svergun
King's College London BHF Centre for Research Excellence
Co-authored papers 5
Jill Trewhella
The University of Sydney
Co-authored papers 5
Paul D Adams
Lawrence Berkeley National Laboratory
Co-authored papers 4
Wah Chiu
Stanford University
Co-authored papers 4
Margaret J Gabanyi
Institute for Quantitative Biomedicine, The State University of New Jersey
Co-authored papers 4
John L Markley
University of Wisconsin-Madison
Co-authored papers 4
John A Tainer
The University of Texas MD Anderson Cancer Center
Co-authored papers 3
Randy J Read
Cambridge Institute for Medical Research, University of Cambridge
Co-authored papers 3
Christine Orengo
University College London, Institute of Structural and Molecular Biology
Co-authored papers 3
Alexandre M J J Bonvin
Bijvoet Center for Biomolecular Research, Utrecht University
Co-authored papers 3
George N Phillips
Rice University
Co-authored papers 3
Rhiju Das
Stanford University School of Medicine
Co-authored papers 3
Roland L Dunbrack
Fox Chase Cancer Center
Co-authored papers 3
Release 1.2