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Author Details

Shuntai Zhou
University of North Carolina at Chapel Hill
2010
41
18
Wade Schulz (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36791724Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infection.Cell Rep Med2023
37662274<i>N</i><sup>4</sup> -Hydroxycytidine/Molnupiravir Inhibits RNA-Virus Induced Encephalitis by Producing Mutated Viruses with Reduced Fitness.bioRxiv2023
37283544Use of Next-Generation Sequencing in a State-Wide Strategy of HIV-1 Surveillance: Impact of the SARS-COV-2 Pandemic on HIV-1 Diagnosis and Transmission.J Infect Dis2023
36920025Selection of HIV-1 for resistance to fifth-generation protease inhibitors reveals two independent pathways to high-level resistance.Elife2023
36717718Rebound HIV-1 in cerebrospinal fluid after antiviral therapy interruption is mainly clonally amplified R5 T cell-tropic virus.Nat Microbiol2023
34628443HIV-1 drug resistance and genetic diversity in a cohort of people with HIV-1 in Nigeria.AIDS2022
36043120COVID-19 Outcomes in Stage IV Cancer Patients Receiving Immune Checkpoint Inhibitors.SN Compr Clin Med2022
36066505A Single Center Retrospective Study of the Impact of COVID-19 Infection on Immune-related Adverse Events in Cancer Patients Receiving Immune Checkpoint Inhibitors.J Immunother2022
36326446Unique Molecular Identifiers and Multiplexing Amplicons Maximize the Utility of Deep Sequencing To Critically Assess Population Diversity in RNA Viruses.ACS Infect Dis2022
35975998Characterization of Macrophage-Tropic HIV-1 Infection of Central Nervous System Cells and the Influence of Inflammation.J Virol2022
32663847Near Real-Time Identification of Recent Human Immunodeficiency Virus Transmissions, Transmitted Drug Resistance Mutations, and Transmission Networks by Multiplexed Primer ID-Next-Generation Sequencing in North Carolina.J Infect Dis2021
33796612Primer ID Next-Generation Sequencing for the Analysis of a Broad Spectrum Antiviral Induced Transition Mutations and Errors Rates in a Coronavirus Genome.Bio Protoc2021
33961695β-d-N4-hydroxycytidine Inhibits SARS-CoV-2 Through Lethal Mutagenesis But Is Also Mutagenic To Mammalian Cells.J Infect Dis2021
34255064Reply to Troth et al.J Infect Dis2021
32253226An orally bioavailable broad-spectrum antiviral inhibits SARS-CoV-2 in human airway epithelial cell cultures and multiple coronaviruses in mice.Sci Transl Med2020
31914800HIV-1 Central Nervous System Compartmentalization and Cytokine Interplay in Non-Subtype B HIV-1 Infections in Nigeria and Malawi.AIDS Res Hum Retroviruses2020
32605062Multi-Laboratory Comparison of Next-Generation to Sanger-Based Sequencing for HIV-1 Drug Resistance Genotyping.Viruses2020
32796074Two Genetic Differences between Closely Related Zika Virus Strains Determine Pathogenic Outcome in Mice.J Virol2020
32759675Fact and Fiction about 1%: Next Generation Sequencing and the Detection of Minor Drug Resistant Variants in HIV-1 Populations with and without Unique Molecular Identifiers.Viruses2020
33021198The HIV-1 latent reservoir is largely sensitive to circulating T cells.Elife2020
32269129Deep Sequencing Reveals Compartmentalized HIV-1 in the Semen of Men with and without Sexually Transmitted Infection-Associated Urethritis.J Virol2020
31361460Picomolar to Micromolar: Elucidating the Role of Distal Mutations in HIV-1 Protease in Conferring Drug Resistance.ACS Chem Biol2019
31597754The replication-competent HIV-1 latent reservoir is primarily established near the time of therapy initiation.Sci Transl Med2019
29756455Characterization of the Transmitted Virus in an Ongoing HIV-1 Epidemic Driven by Injecting Drug Use.AIDS Res Hum Retroviruses2018
30081054Evolutionary pathways to NS5A inhibitor resistance in genotype 1 hepatitis C virus.Antiviral Res2018
30010965Using Primer-ID Deep Sequencing to Detect Recent Human Immunodeficiency Virus Type 1 Infection.J Infect Dis2018
27683060Quantification of the Latent HIV-1 Reservoir Using Ultra Deep Sequencing and Primer ID in a Viral Outgrowth Assay.J Acquir Immune Defic Syndr2017
28077653Characterizing HIV-1 Splicing by Using Next-Generation Sequencing.J Virol2017
28859436Prevalence of Drug-Resistant Minority Variants in Untreated HIV-1-Infected Individuals With and Those Without Transmitted Drug Resistance Detected by Sanger Sequencing.J Infect Dis2017
28688086Sequencing the Biology of Entry: The Retroviral env Gene.Curr Top Microbiol Immunol2017
27132284Diversity and Tropism of HIV-1 Rebound Virus Populations in Plasma Level After Treatment Discontinuation.J Infect Dis2016
27382162Cytosine deamination and the precipitous decline of spontaneous mutation during Earth's history.Proc Natl Acad Sci U S A2016
27226378Deep Sequencing of the HIV-1 env Gene Reveals Discrete X4 Lineages and Linkage Disequilibrium between X4 and R5 Viruses in the V1/V2 and V3 Variable Regions.J Virol2016
25748056Primer ID Informs Next-Generation Sequencing Platforms and Reveals Preexisting Drug Resistance Mutations in the HIV-1 Reverse Transcriptase Coding Domain.AIDS Res Hum Retroviruses2015
26041299Primer ID Validates Template Sampling Depth and Greatly Reduces the Error Rate of Next-Generation Sequencing of HIV-1 Genomic RNA Populations.J Virol2015
26223642R5 Macrophage-Tropic HIV-1 in the Male Genital Tract.J Virol2015
24901464Total daily pill burden in HIV-infected patients in the southern United States.AIDS Patient Care STDS2014
22544191Monitoring HIV drug resistance using early warning indicators in China: results from a pilot survey conducted in 2008.Clin Infect Dis2012
21600849Effect of earlier initiation of antiretroviral treatment and increased treatment coverage on HIV-related mortality in China: a national observational cohort study.Lancet Infect Dis2011
20032784Hepatitis B and hepatitis C seroprevalence in children receiving antiretroviral therapy for human immunodeficiency virus-1 infection in China, 2005-2009.J Acquir Immune Defic Syndr2010
20500898Recent key advances in human immunodeficiency virus medicine and implications for China.AIDS Res Ther2010
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Collaborators

Ronald Swanstrom
Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill
Co-authored papers 33
Joseph J Eron
Co-authored papers 7
Ralph S Baric
University of North Carolina
Co-authored papers 4
Simon D W Frost
Co-authored papers 2
Celia A Schiffer
University of Massachusetts Chan Medical School
Co-authored papers 2
Corbin D Jones
University of North Carolina at Chapel Hill
Co-authored papers 2
Sergei L Kosakovsky Pond
Co-authored papers 2
Nathan D Grubaugh
Yale School of Public Health
Co-authored papers 1
Mark T Heise
University of North Carolina at Chapel Hill.
Co-authored papers 1
Kien Pham
Yale School of Public Health
Co-authored papers 1
Ian Frank
IF School of Medicine, University of Pennsylvania
Co-authored papers 1
Amy C Sims
The University of North Carolina at Chapel Hill
Co-authored papers 1
Nadia R Roan
University of California, USA Gladstone Institutes san francisco
Co-authored papers 1
Umadevi Veluvolu
Co-authored papers 1
Anne M Hahn
Yale School of Public Health
Co-authored papers 1
Sarah R Leist
University of North Carolina at Chapel Hill
Co-authored papers 1
Roger Paredes
Hospital Germans Trias i Pujol
Co-authored papers 1
Jeffrey M Jacobson
Co-authored papers 1
Mark R Denison
Vanderbilt University Medical Center
Co-authored papers 1
Rachel L Graham
University of North Carolina
Co-authored papers 1
David C Montefiori
Co-authored papers 1
David Ferguson
Yale School of Medicine
Co-authored papers 1
Laura J Stevens
Vanderbilt University Medical Center
Co-authored papers 1
Mallery I Breban
Yale School of Public Health
Co-authored papers 1
Wade Schulz (CM4AI)
Yale University
Co-authored papers 1
Steven G Deeks
University of California san francisco
Co-authored papers 1
Chrispin Chaguza
Yale School of Public Health, YaleUniversity
Co-authored papers 1
Scott C Roberts
Yale School of Medicine
Co-authored papers 1
Alexandra Sch??fer
University of North Carolina at Chapel Hill
Co-authored papers 1
Verity Hill
Yale School of Public Health
Co-authored papers 1
Release 1.2