Author details

Full Name

Jeremy D Selengut

Affiliation

Craig Venter Institute, 9704 Medical Center Drive

ORCID

Career Start Year

1994

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
33782402	Expanding the scope of plant genome engineering with Cas12a orthologs and highly multiplexable editing systems.	Nat Commun	2021
33782402	Expanding the scope of plant genome engineering with Cas12a orthologs and highly multiplexable editing systems.	Nat Commun	2021
33898973	Expanding plant genome-editing scope by an engineered iSpyMacCas9 system that targets A-rich PAM sequences.	Plant Commun	2020
33898973	Expanding plant genome-editing scope by an engineered iSpyMacCas9 system that targets A-rich PAM sequences.	Plant Commun	2020
23197656	TIGRFAMs and Genome Properties in 2013.	Nucleic Acids Res	2013
23197656	TIGRFAMs and Genome Properties in 2013.	Nucleic Acids Res	2013
22096229	InterPro in 2011: new developments in the family and domain prediction database.	Nucleic Acids Res	2012
23145189	Whole genome analysis of Leptospira licerasiae provides insight into leptospiral evolution and pathogenicity.	PLoS Negl Trop Dis	2012
22037399	Archaeosortases and exosortases are widely distributed systems linking membrane transit with posttranslational modification.	J Bacteriol	2012
22170421	Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.	ISME J	2012
22096229	InterPro in 2011: new developments in the family and domain prediction database.	Nucleic Acids Res	2012
23145189	Whole genome analysis of Leptospira licerasiae provides insight into leptospiral evolution and pathogenicity.	PLoS Negl Trop Dis	2012
22037399	Archaeosortases and exosortases are widely distributed systems linking membrane transit with posttranslational modification.	J Bacteriol	2012
22170421	Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage.	ISME J	2012
22070167	ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process.	BMC Bioinformatics	2011
22070167	ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process.	BMC Bioinformatics	2011
20102603	Sites Inferred by Metabolic Background Assertion Labeling (SIMBAL): adapting the Partial Phylogenetic Profiling algorithm to scan sequences for signatures that predict protein function.	BMC Bioinformatics	2010
20675471	Unexpected abundance of coenzyme F(420)-dependent enzymes in Mycobacterium tuberculosis and other actinobacteria.	J Bacteriol	2010
20102603	Sites Inferred by Metabolic Background Assertion Labeling (SIMBAL): adapting the Partial Phylogenetic Profiling algorithm to scan sequences for signatures that predict protein function.	BMC Bioinformatics	2010
20675471	Unexpected abundance of coenzyme F(420)-dependent enzymes in Mycobacterium tuberculosis and other actinobacteria.	J Bacteriol	2010
18940856	InterPro: the integrative protein signature database.	Nucleic Acids Res	2009
19201974	Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.	Appl Environ Microbiol	2009
18940856	InterPro: the integrative protein signature database.	Nucleic Acids Res	2009
19201974	Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.	Appl Environ Microbiol	2009
18464787	The minimum information about a genome sequence (MIGS) specification.	Nat Biotechnol	2008
18464787	The minimum information about a genome sequence (MIGS) specification.	Nat Biotechnol	2008
17151080	TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes.	Nucleic Acids Res	2007
17468768	Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus.	Nat Biotechnol	2007
17202162	New developments in the InterPro database.	Nucleic Acids Res	2007
17151080	TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes.	Nucleic Acids Res	2007
17468768	Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus.	Nat Biotechnol	2007
17202162	New developments in the InterPro database.	Nucleic Acids Res	2007
16980487	Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus.	J Bacteriol	2006
16901213	Meeting report: eGenomics: Cataloguing our Complete Genome Collection II.	OMICS	2006
16980487	Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus.	J Bacteriol	2006
16930487	Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic.	BMC Biol	2006
16901213	Meeting report: eGenomics: Cataloguing our Complete Genome Collection II.	OMICS	2006
16930487	Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic.	BMC Biol	2006
15347579	Genome Properties: a system for the investigation of prokaryotic genetic content for microbiology, genome annotation and comparative genomics.	Bioinformatics	2005
16159782	Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition.	J Bacteriol	2005
15608177	InterPro, progress and status in 2005.	Nucleic Acids Res	2005
15347579	Genome Properties: a system for the investigation of prokaryotic genetic content for microbiology, genome annotation and comparative genomics.	Bioinformatics	2005
16172379	Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome".	Proc Natl Acad Sci U S A	2005
16292354	A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes.	PLoS Comput Biol	2005
18629208	eGenomics: Cataloguing our Complete Genome Collection.	Comp Funct Genomics	2005
18629208	eGenomics: Cataloguing our Complete Genome Collection.	Comp Funct Genomics	2005
16159782	Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition.	J Bacteriol	2005
16172379	Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome".	Proc Natl Acad Sci U S A	2005
16292354	A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes.	PLoS Comput Biol	2005
15608177	InterPro, progress and status in 2005.	Nucleic Acids Res	2005

1 - 50 of 88

Corey M Hudson

Informatics Institute, University of Missouri

Career Start Year 2011

Number of shared co-authors 3

Joanna C Grant

Joint Center for Structural Genomics

Career Start Year 2009

Number of shared co-authors 2

Vera van Noort

Leiden University, Institute of Biology Leiden

Career Start Year 2003

Number of shared co-authors 2

Elena Evdokimova

University of Toronto

Career Start Year 2002

Number of shared co-authors 0

Heath E Klock

Merck & Co., Inc.

Career Start Year 2002

Number of shared co-authors 2

Paramvir S Dehal

Lawrence Berkeley National Laboratory

Career Start Year 2001

Number of shared co-authors 7

Aaron A Best

Hope College

Career Start Year 2001

Number of shared co-authors 2

Jo??o C Setubal

Chemistry Institute, Universidade de Sao Paulo - USP

Career Start Year 2000

Number of shared co-authors 14

Weizhong Li

J. Craig Venter Institute

Career Start Year 2000

Number of shared co-authors 12

Patrik D'haeseleer

Lawrence Livermore National Laboratory

Career Start Year 1999

Number of shared co-authors 3

Marcin P Joachimiak

E O Lawrence Berkeley National Laboratory, UCSF Medical Center, University of California, Berkeley, University of Chicago

Career Start Year 1997

Number of shared co-authors 10

Hsiu-Ju Chiu

Joint Center for Structural Genomics

Career Start Year 1997

Number of shared co-authors 2

Alexei Savchenko

University of Toronto

Career Start Year 1997

Number of shared co-authors 3

Iddo Friedberg

Iowa State University

Career Start Year 1997

Number of shared co-authors 22

Qingping Xu

Argonne National Laboratory

Career Start Year 1996

Number of shared co-authors 2

Fiona S L Brinkman

Simon Fraser University

Career Start Year 1995

Number of shared co-authors 7

Lukasz Jaroszewski

University of California Riverside School of Medicine

Career Start Year 1995

Number of shared co-authors 9

John Parkinson

The Hospital for Sick Children

Career Start Year 1994

Number of shared co-authors 16

Manesh Shah

University of Tennessee Knoxville

Career Start Year 1993

Number of shared co-authors 2

Heidi J Sofia

National Human Genome Research Institute

Career Start Year 1993

Number of shared co-authors 1

Martijn A Huynen

Radboud University Medical Centre Nijmegen

Career Start Year 1992

Number of shared co-authors 2

Asaf Salamov

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory

Career Start Year 1991

Number of shared co-authors 9

Arcady Mushegian

National Science Foundation

Career Start Year 1991

Number of shared co-authors 3

Lee Ann McCue

Pacific Northwest National Laboratory

Career Start Year 1991

Number of shared co-authors 4

Mitchell D Miller

Rice University

Career Start Year 1989

Number of shared co-authors 2

Marc-Andr?? Elsliger

Joint Center for Structural Genomics

Career Start Year 1989

Number of shared co-authors 2

Scott A Lesley

Merck & Co., Inc.

Career Start Year 1987

Number of shared co-authors 2

Frank R Collart

Argonne National Laboratory

Career Start Year 1985

Number of shared co-authors 3

Andrei L Osterman

Sanford Burnham Prebys Medical Discovery Institute

Career Start Year 1980

Number of shared co-authors 4

Milton H Saier

University of California at San Diego

Career Start Year 1951

Number of shared co-authors 12

row(s) 1 - 30 of 30

Daniel H Haft

National Center for Biotechnology Information, National Institutes of Health

Co-authored papers 29

Owen White

Institute for Genome Sciences, University of Maryland School of Medicine

Co-authored papers 13

Ian T Paulsen

Macquarie University

Co-authored papers 11

William C Nelson

Pacific Northwest National Laboratory

Co-authored papers 11

Robert J Dodson

Northwestern University Biomedical Informatics Center and Center for Genetic Medicine

Co-authored papers 11

Claire M Fraser

Institute for Genome Sciences, University of Maryland School of Medicine

Co-authored papers 11

Tanja M Davidsen

Co-authored papers 10

Michelle Giglio

University of Maryland School of Medicine, Institute for Genome Sciences

Co-authored papers 8

Karen E Nelson

J. Craig Venter Institute, 9605 Medical Center Drive

Co-authored papers 8

Samuel V Angiuoli

Personal Genome Diagnostics Inc.

Co-authored papers 6

Jeremy Peterson

The Institute for Genomic Research, 9712 Medical Center Drive

Co-authored papers 6

Ivica Letunic

Co-authored papers 5

Rodrigo Lopez

Co-authored papers 5

Rolf Apweiler

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 5

Nicolas Hulo

Co-authored papers 5

Alex Bateman

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 5

David Binns

Co-authored papers 5

David Lonsdale

Co-authored papers 5

Daniel Kahn

Co-authored papers 5

Ujjwal Das

Co-authored papers 5

Peer Bork

University of Wurzburg

Co-authored papers 5

Nicola Mulder

University of Cape Town

Co-authored papers 5

Teresa K Attwood

Co-authored papers 5

Christian J A Sigrist

Co-authored papers 5

Jonathan A Eisen

McLean Hospital

Co-authored papers 5

Cathy H Wu

Georgetown University Medical Center

Co-authored papers 4

Jane M Carlton

Center for Genomics and Systems Biology

Co-authored papers 4

Amos Bairoch

University of Geneva

Co-authored papers 4

Alex Mitchell

European Bioinformatics Institute

Co-authored papers 4

Martin Madera

Co-authored papers 4

1 - 30

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