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Author Details

Tomohiro Tamura
National Institute of Advanced Industrial Science and Technology (AIST)
1985
167
43
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37662426Metabolic implications for predatory and parasitic bacterial lineages in activated sludge wastewater treatment systems.Water Res X2023
35053118Konjac Ceramide (kCer)-Mediated Signal Transduction of the Sema3A Pathway Promotes HaCaT Keratinocyte Differentiation.Biology (Basel)2022
36399168Disruption of SMC-related genes promotes recombinant cholesterol esterase production in Burkholderia stabilis.Appl Microbiol Biotechnol2022
33279561Bacterial triacylglycerol lipase is a potential cholesterol esterase: Identification of a key determinant for sterol-binding specificity.Int J Biol Macromol2021
33227632Koleobacter methoxysyntrophicus gen. nov., sp. nov., a novel anaerobic bacterium isolated from deep subsurface oil field and proposal of Koleobacteraceae fam. nov. and Koleobacterales ord. nov. within the class Clostridia of the phylum Firmicutes.Syst Appl Microbiol2021
32800811Enhancement of the productivity of free dihomo-γ-linolenic acid via co-overexpression of elongase and two desaturase genes in Aspergillus oryzae.J Biosci Bioeng2020
32102436Nrp1 is Activated by Konjac Ceramide Binding-Induced Structural Rigidification of the a1a2 Domain.Cells2020
30327168Heterologous production of free dihomo-γ-linolenic acid by Aspergillus oryzae and its extracellular release via surfactant supplementation.J Biosci Bioeng2019
31216942Production of recombinant extracellular cholesterol esterase using consistently active promoters in <i>Burkholderia stabilis</i>.Biosci Biotechnol Biochem2019
30948473Genome Sequence of Rhodococcus erythropolis Type Strain JCM 3201.Microbiol Resour Announc2019
31035716Neurite Outgrowth and Morphological Changes Induced by 8-trans Unsaturation of Sphingadienine in kCer Molecular Species.Int J Mol Sci2019
31171855Developing a codon optimization method for improved expression of recombinant proteins in actinobacteria.Sci Rep2019
30623117Konjac ceramide (kCer) regulates keratinocyte migration by Sema3A-like repulsion mechanism.Biochem Biophys Rep2019
29238028Konjac Ceramide (kCer) Regulates NGF-Induced Neurite Outgrowth via the Sema3A Signaling Pathway.J Oleo Sci2018
29980745Identification of a novel bacteriocin-like protein and structural gene from Rhodococcus erythropolis JCM 2895, using suppression-subtractive hybridization.J Antibiot (Tokyo)2018
30533676Complete Genome Sequence of an Efficient Vitamin D<sub>3</sub>-Hydroxylating Bacterium, Pseudonocardia autotrophica NBRC 12743.Microbiol Resour Announc2018
29599160Whole-Genome Sequence of Acetobacter orientalis Strain FAN1, Isolated from Caucasian Yogurt.Genome Announc2018
29175123Characterization and application of a novel nicotinamide mononucleotide adenylyltransferase from Thermus thermophilus HB8.J Biosci Bioeng2018
29238029Characterization of Konjac Ceramide (kCer) Binding to Sema3A Receptor Nrp1.J Oleo Sci2018
28827579Bifunctional quorum-quenching and antibiotic-acylase MacQ forms a 170-kDa capsule-shaped molecule containing spacer polypeptides.Sci Rep2017
28243709Heterologous production of kasugamycin, an aminoglycoside antibiotic from Streptomyces kasugaensis, in Streptomyces lividans and Rhodococcus erythropolis L-88 by constitutive expression of the biosynthetic gene cluster.Appl Microbiol Biotechnol2017
28471358Structural insights into the mechanism of the drastic changes in enzymatic activity of the cytochrome P450 vitamin D<sub>3</sub> hydroxylase (CYP107BR1) caused by a mutation distant from the active site.Acta Crystallogr F Struct Biol Commun2017
28729264Complete Genome Sequence of <i>Burkholderia stabilis</i> FERMP-21014.Genome Announc2017
26836943Prevalence, Molecular Characterization, and Antimicrobial Susceptibility of Methicillin-Resistant Staphylococcus aureus Isolated from Milk and Dairy Products.Foodborne Pathog Dis2016
25004116Occurrence, genetic characterization and antimicrobial resistance of Salmonella isolated from chicken meat and giblets.Epidemiol Infect2015
28955819Chemoenzymatically prepared konjac ceramide inhibits NGF-induced neurite outgrowth by a semaphorin 3A-like action.Biochem Biophys Rep2015
26408138Molecular Characterization and Antimicrobial Resistance Profile of Methicillin-Resistant Staphylococcus aureus in Retail Chicken.J Food Prot2015
26420879Quantitative GSL-glycome analysis of human whole serum based on an EGCase digestion and glycoblotting method.J Lipid Res2015
25715785Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate.Appl Microbiol Biotechnol2015
24212579A vector library for silencing central carbon metabolism genes with antisense RNAs in Escherichia coli.Appl Environ Microbiol2014
25305383Structural and genomic DNA analysis of the putative TetR transcriptional repressor SCO7518 from Streptomyces coelicolor A3(2).FEBS Lett2014
24365107Protein complex purification from Thermoplasma acidophilum using a phage display library.J Microbiol Methods2014
24269679Structure of the quinoline N-hydroxylating cytochrome P450 RauA, an essential enzyme that confers antibiotic activity on aurachin alkaloids.FEBS Lett2014
23345451Total cellular glycomics allows characterizing cells and streamlining the discovery process for cellular biomarkers.Proc Natl Acad Sci U S A2013
24100565Crystallization and preliminary X-ray diffraction studies of D-threo-3-hydroxyaspartate dehydratase isolated from Delftia sp. HT23.Acta Crystallogr Sect F Struct Biol Cryst Commun2013
24115473A single mutation at the ferredoxin binding site of P450 Vdh enables efficient biocatalytic production of 25-hydroxyvitamin D(3).Chembiochem2013
23831227SCO4008, a putative TetR transcriptional repressor from Streptomyces coelicolor A3(2), regulates transcription of sco4007 by multidrug recognition.J Mol Biol2013
23677853Cloning and heterologous expression of the aurachin RE biosynthesis gene cluster afford a new cytochrome P450 for quinoline N-hydroxylation.Chembiochem2013
23618855Structural and genomic DNA analysis of a putative transcription factor SCO5550 from Streptomyces coelicolor A3(2): regulating the expression of gene sco5551 as a transcriptional activator with a novel dimer shape.Biochem Biophys Res Commun2013
23803571Prevalence, genetic characterization and virulence genes of sorbitol-fermenting Escherichia coli O157:H- and E. coli O157:H7 isolated from retail beef.Int J Food Microbiol2013
23480057Gene silencing in Escherichia coli using antisense RNAs expressed from doxycycline-inducible vectors.Lett Appl Microbiol2013
22131001Multiple-gene silencing using antisense RNAs in Escherichia coli.Methods Mol Biol2012
23047115Rhodococcus prokaryotic ubiquitin-like protein (Pup) is degraded by deaminase of pup (Dop).Biosci Biotechnol Biochem2012
22804868Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV.FEBS J2012
22798689Preparation and characterization of EGCase I, applicable to the comprehensive analysis of GSLs, using a rhodococcal expression system.J Lipid Res2012
22506807Sequential enzymatic epoxidation involved in polyether lasalocid biosynthesis.J Am Chem Soc2012
22561880A new carbon catabolite repression mutation of Escherichia coli, mlcâ¿¿, and its use for producing isobutanol.J Biosci Bioeng2012
22664344Sphingomyelinase C from Streptomyces sp. A9107: unusual primary structure for bacterial sphingomyelinase C.J Biosci Bioeng2012
22280968Identification of a methanol-inducible promoter from Rhodococcus erythropolis PR4 and its use as an expression vector.J Biosci Bioeng2012
22328750De novo genome project for the aromatic degrader Rhodococcus pyridinivorans strain AK37.J Bacteriol2012
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Collaborators

Max Planck Institute of Biochemistry
Co-authored papers 20
MicroBiopharm Japan Co. Ltd.
Co-authored papers 9
Institute of Biochemistry, HUN-REN Biological Research Centre
Co-authored papers 9
Max Planck Institute of Biochemistry
Co-authored papers 2
Institute of Biochemistry and Molecular Biology, Semmelweis University
Co-authored papers 2
Institute of Anatomy, University of Zurich
Co-authored papers 1
University of California San Francisco
Co-authored papers 1
Technical University Darmstadt
Co-authored papers 1
Juntendo University
Co-authored papers 1
Max-Planck Institute of Biochemistry
Co-authored papers 1
Max Planck Institute of Biochemistry
Co-authored papers 1
Tokyo Medical and Dental University
Co-authored papers 1
J. Stefan Institute
Co-authored papers 1
Max-Planck-Institute of Biochemistry
Co-authored papers 1
Research Unit Analytical Pathology, German Research Center for Environmental Health
Co-authored papers 1
Utrecht University
Co-authored papers 1
The Scripps Research Institute
Co-authored papers 1
RIKEN BioResource Research Center
Co-authored papers 1