Skip to Main Content

Author Details

Avrum Spira
Boston University School of Medicine
1997
165
52
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36229050Bronchial gene expression alterations associated with radiological bronchiectasis.Eur Respir J2023
37500728Single-molecule genome-wide mutation profiles of cell-free DNA for non-invasive detection of cancer.Nat Genet2023
37567908Integrative genetic and genomic networks identify microRNA associated with COPD and ILD.Sci Rep2023
37150829Convergence of YAP/TAZ, TEAD and TP63 activity is associated with bronchial premalignant severity and progression.J Exp Clin Cancer Res2023
37477508Single-Cell Characterization of Pulmonary Nodules Implicates Suppression of Immunosurveillance across Early Stages of Lung Adenocarcinoma.Cancer Res2023
33972452Bronchial gene expression signature associated with rate of subsequent FEV<sub>1</sub> decline in individuals with and at risk of COPD.Thorax2022
35740559Clinical Study of Aspirin and Zileuton on Biomarkers of Tobacco-Related Carcinogenesis in Current Smokers.Cancers (Basel)2022
35830375Clinical validation and utility of Percepta GSC for the evaluation of lung cancer.PLoS One2022
36307504Smoking modulates different secretory subpopulations expressing SARS-CoV-2 entry genes in the nasal and bronchial airways.Sci Rep2022
36098652The Single-Cell Immunogenomic Landscape of B and Plasma Cells in Early-Stage Lung Adenocarcinoma.Cancer Discov2022
34675046The molecular and cellular mechanisms associated with the destruction of terminal bronchioles in COPD.Eur Respir J2022
32758562Impact of the Percepta Genomic Classifier on Clinical Management Decisions in a Multicenter Prospective Study.Chest2021
33903236Aberrant epithelial polarity cues drive the development of precancerous airway lesions.Proc Natl Acad Sci U S A2021
33862585The transition from normal lung anatomy to minimal and established fibrosis in idiopathic pulmonary fibrosis (IPF).EBioMedicine2021
33809063Single-Cell Expression Landscape of SARS-CoV-2 Receptor <i>ACE2</i> and Host Proteases in Normal and Malignant Lung Tissues from Pulmonary Adenocarcinoma Patients.Cancers (Basel)2021
34794107Pathologic and gene expression comparison of CT- screen detected and routinely detected stage I/0 lung adenocarcinoma in NCCN risk-matched cohorts.Cancer Treat Res Commun2021
34464235Integrated Biomarkers for the Management of Indeterminate Pulmonary Nodules.Am J Respir Crit Care Med2021
34580161Elevated T cell repertoire diversity is associated with progression of lung squamous cell premalignant lesions.J Immunother Cancer2021
33972311Resolving the Spatial and Cellular Architecture of Lung Adenocarcinoma by Multiregion Single-Cell Sequencing.Cancer Discov2021
32946850Distinguishing Smoking-Related Lung Disease Phenotypes Via Imaging and Molecular Features.Chest2021
32730093Augmented Lipocalin-2 Is Associated with Chronic Obstructive Pulmonary Disease and Counteracts Lung Adenocarcinoma Development.Am J Respir Crit Care Med2021
31610044Characterizing peak exposure of secondhand smoke using a real-time PM<sub>2.5</sub> monitor.Indoor Air2020
32044442Transcriptomic changes in the nasal epithelium associated with diesel engine exhaust exposure.Environ Int2020
33060632Identifying a nasal gene expression signature associated with hyperinflation and treatment response in severe COPD.Sci Rep2020
33093160Biomarkers for Lung Cancer Screening and Detection.Cancer Epidemiol Biomarkers Prev2020
32512511Low oxygen saturation during sleep reduces CD1D and RAB20 expressions that are reversed by CPAP therapy.EBioMedicine2020
30529598Biomarkers in Lung Cancer Screening: Achievements, Promises, and Challenges.J Thorac Oncol2019
31844660Characterizing smoking-induced transcriptional heterogeneity in the human bronchial epithelium at single-cell resolution.Sci Adv2019
31233743Gene Expression Alterations in the Bronchial Epithelium of e-Cigarette Users.Chest2019
31451521Effect of Intermittent Versus Continuous Low-Dose Aspirin on Nasal Epithelium Gene Expression in Current Smokers: A Randomized, Double-Blinded Trial.Cancer Prev Res (Phila)2019
31015447Molecular subtyping reveals immune alterations associated with progression of bronchial premalignant lesions.Nat Commun2019
30896962Driver Mutations in Normal Airway Epithelium Elucidate Spatiotemporal Resolution of Lung Cancer.Am J Respir Crit Care Med2019
31061400Tobacco-Related Alterations in Airway Gene Expression are Rapidly Reversed Within Weeks Following Smoking-Cessation.Sci Rep2019
31142513The Immune Contexture Associates with the Genomic Landscape in Lung Adenomatous Premalignancy.Cancer Res2019
30846474Effect of long-term corticosteroid treatment on microRNA and gene-expression profiles in COPD.Eur Respir J2019
30845938Detection of early lung cancer among military personnel (DECAMP) consortium: study protocols.BMC Pulm Med2019
30464018Electronic cigarettes: a task force report from the European Respiratory Society.Eur Respir J2019
30664780Deciphering the genomic, epigenomic, and transcriptomic landscapes of pre-invasive lung cancer lesions.Nat Med2019
30383540An airway epithelial IL-17A response signature identifies a steroid-unresponsive COPD patient subgroup.J Clin Invest2019
29072842Impact of Chronic Obstructive Pulmonary Disease on Immune-based Treatment for Lung Cancer. Moving toward Disease Interception.Am J Respir Crit Care Med2018
30072506microRNA-mRNA regulatory networks underlying chronic mucus hypersecretion in COPD.Eur Respir J2018
29932825Impact of acute exposure to cigarette smoke on airway gene expression.Physiol Genomics2018
30425966Transcriptomic Alterations in Lung Adenocarcinoma Unveil New Mechanisms Targeted by the <i>TBX2</i> Subfamily of Tumor Suppressor Genes.Front Oncol2018
30640517Current Status and Future Opportunities in Lung Precision Medicine Research with a Focus on Biomarkers. An American Thoracic Society/National Heart, Lung, and Blood Institute Research Statement.Am J Respir Crit Care Med2018
29382653Genome-Wide Gene Expression Changes in the Normal-Appearing Airway during the Evolution of Smoking-Associated Lung Adenocarcinoma.Cancer Prev Res (Phila)2018
29463557The Airway Transcriptome as a Biomarker for Early Lung Cancer Detection.Clin Cancer Res2018
29601802Impact of an Interdisciplinary Computational Research Section in a Department of Medicine: An 8-Year Perspective.Am J Med2018
29510677Summarizing performance for genome scale measurement of miRNA: reference samples and metrics.BMC Genomics2018
29624449Defining Impaired Respiratory Health. A Paradigm Shift for Pulmonary Medicine.Am J Respir Crit Care Med2018
27856720Nondestructive cryomicro-CT imaging enables structural and molecular analysis of human lung tissue.J Appl Physiol (1985)2017
  • 1 - 50 of 165

Recommended Authors

Andrew Lamb
Brigham and Women's Hospital, Harvard Medical School
Career Start Year 2017
Number of shared co-authors 4
Jennifer A Aguiar
University of Waterloo
Career Start Year 2017
Number of shared co-authors 0
Yonathan Brhane
Lunenfeld-Tanenbaum Research Institute
Career Start Year 2014
Number of shared co-authors 2
Fei Li
Shanghai Pulmonary Hospital, Tongji University School of Medicine
Career Start Year 2010
Number of shared co-authors 0
Mary Zhang
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Career Start Year 2010
Number of shared co-authors 0
Bertrand De Meulder
European Institute for Systems Biology and Medicine, CNRS-ENS-UCBL-INSERM
Career Start Year 2010
Number of shared co-authors 0
Peter J Castaldi
Harvard Medical School
Career Start Year 2009
Number of shared co-authors 8
Karolina Edlund
Leibniz Research Centre for Working Environment and Human Factors at TU Dortmund
Career Start Year 2008
Number of shared co-authors 0
Ying-Wooi Wan
Baylor College of Medicine
Career Start Year 2008
Number of shared co-authors 2
Yang Xie
Quantitative Biomedical Research Center
Career Start Year 2007
Number of shared co-authors 5
Xi Liu
College of Biology and Food, Shangqiu Normal University
Career Start Year 2007
Number of shared co-authors 11
Francesc Castro-Giner
University of Basel and University Hospital Basel
Career Start Year 2006
Number of shared co-authors 4
Florian Martin
Career Start Year 2006
Number of shared co-authors 1
Alain Sewer
Universitat Basel
Career Start Year 2005
Number of shared co-authors 0
Melissa Rotunno
Boston Children's Hospital and Harvard Medical School
Career Start Year 2004
Number of shared co-authors 2
Bjoern Titz
university of california los angeles
Career Start Year 2004
Number of shared co-authors 1
Andrew V Kossenkov
The Wistar Institute
Career Start Year 2003
Number of shared co-authors 4
Rayjean J Hung
Lunenfeld-Tanenbaum Research Institute
Career Start Year 2003
Number of shared co-authors 9
St??phanie Bou??
Philip Morris International Research Laboratories Pte. Ltd
Career Start Year 2002
Number of shared co-authors 0
Jette Bornholdt
University of Copenhagen
Career Start Year 2002
Number of shared co-authors 0
Alvin T Kho
Brigham and Women's Hospital, Harvard Medical School, Boston Children's Hospital
Career Start Year 2002
Number of shared co-authors 7
Michael Slifker
Fox Chase Cancer Center
Career Start Year 2002
Number of shared co-authors 1
Patrick Micke
Uppsala University
Career Start Year 1997
Number of shared co-authors 1
Ping Yang
Mayo Clinic
Career Start Year 1996
Number of shared co-authors 9
Chang-Qi Zhu
Princess Margaret Cancer Centre, University Health Network
Career Start Year 1996
Number of shared co-authors 4
Maor Sauler
Yale School of Medicine
Career Start Year 1994
Number of shared co-authors 2
Angela Risch
Allergy-Cancer-BioNano Research Centre, University of Salzburg
Career Start Year 1992
Number of shared co-authors 6
David N Watkins
Research Institute in Oncology and Hematology
Career Start Year 1991
Number of shared co-authors 1
Luigi Marchionni
Weill-Cornell School of Medicine
Career Start Year 1989
Number of shared co-authors 4
Ming-Sound Tsao
University Health Network, University of Toronto
Career Start Year 1972
Number of shared co-authors 13

Collaborators

Marc E Lenburg
Co-authored papers 67
Steven M Dubinett
David Geffen School of Medicine at university of california los angeles
Co-authored papers 22
Joshua D Campbell
Co-authored papers 21
Paul Scheet
University of Texas M.D. Anderson Cancer Center
Co-authored papers 9
David Elashoff
David Geffen School of Medicine at University of California los angeles
Co-authored papers 7
Kostyantyn Krysan
David Geffen School of Medicine at University of California at Los Angeles
Co-authored papers 7
George T O'Connor
Boston University School of Medicine
Co-authored papers 7
Pierre P Massion
Vanderbilt-Ingram Cancer Center, Vanderbilt University Medical Center
Co-authored papers 6
Denise R Aberle
David Geffen School of Medicine at university of california los angeles
Co-authored papers 5
David A Schwartz
Co-authored papers 5
Paola Sebastiani
Institute for Clinical Research and Health Policy Studies, Tufts Medical Center
Co-authored papers 5
Xiaoling Zhang
Co-authored papers 5
Jianjun Zhang
The University of Texas MD Anderson Cancer Center
Co-authored papers 4
Frank C Sciurba
Co-authored papers 4
Ivana V Yang
Co-authored papers 4
Lingqi Luo
Co-authored papers 3
Scott M Lippman
Moores Cancer Center, university of california san diego
Co-authored papers 3
Jerry Fowler
The University of Texas MD Anderson Cancer Center
Co-authored papers 3
Juan C Celedón
Co-authored papers 3
Scott T Weiss
Brigham and Women's Hospital, Harvard Medical School
Co-authored papers 3
Gustavo Mostoslavsky
Co-authored papers 3
Augusto A Litonjua
Co-authored papers 3
Linghua Wang
The University of Texas M. D. Anderson
Co-authored papers 3
Marc A Sze
University of Michigan ann arbor
Co-authored papers 3
Edwin K Silverman
Brigham and Women's Hospital
Co-authored papers 3
John Quackenbush
Harvard T. H. Chan School of Public Health
Co-authored papers 3
Judy E Garber
Dana-Farber Cancer Institute
Co-authored papers 3
Gerard A Silvestri
Co-authored papers 3
Victor E Velculescu
Co-authored papers 2
Michael C Fishbein
Co-authored papers 2
Release 1.2