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Author Details

Matthew L Baker
McGovern Medical School at the University of Texas Health Science Center
1998
78
40
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37083840The structure of a 12-segmented dsRNA reovirus: New insights into capsid stabilization and organization.PLoS Pathog2023
37188665Structural insights into cardiolipin replacement by phosphatidylglycerol in a cardiolipin-lacking yeast respiratory supercomplex.Nat Commun2023
34506732In situ structure of the AcrAB-TolC efflux pump at subnanometer resolution.Structure2022
35740898Beyond the Backbone: The Next Generation of Pathwalking Utilities for Model Building in CryoEM Density Maps.Biomolecules2022
35733789AlphaFold2 and CryoEM: Revisiting CryoEM modeling in near-atomic resolution density maps.iScience2022
35577897Author Correction: Structure of a type IV secretion system core complex encoded by multi-drug resistance F plasmids.Nat Commun2022
36376291Conformational motions and ligand-binding underlying gating and regulation in IP<sub>3</sub>R channel.Nat Commun2022
35046412Structure of a type IV secretion system core complex encoded by multi-drug resistance F plasmids.Nat Commun2022
32205861CAR T-cells that target acute B-lineage leukemia irrespective of CD19 expression.Leukemia2021
33905995How mutations in RYR1 that cause malignant hyperthermia increase RYR1 sensitivity to activators.Cell Calcium2021
33542514Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge.Nat Methods2021
34045740Author Correction: Locoregional delivery of CAR T cells to the cerebrospinal fluid for treatment of metastatic medulloblastoma and ependymoma.Nat Med2021
34035440Cryo-EM structure of type 1 IP<sub>3</sub>R channel in a lipid bilayer.Commun Biol2021
34196303Tandem CAR T cells targeting HER2 and IL13Rα2 mitigate tumor antigen escape.J Clin Invest2021
33037202Adaptive thermogenesis enhances the life-threatening response to heat in mice with an Ryr1 mutation.Nat Commun2020
30787441Retraction Note: A homing system targets therapeutic T cells to brain cancer.Nature2019
31588918Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix.Acta Crystallogr D Struct Biol2019
29183891TEM8/ANTXR1-Specific CAR T Cells as a Targeted Therapy for Triple-Negative Breast Cancer.Cancer Res2018
30185905A homing system targets therapeutic T cells to brain cancer.Nature2018
30237066Automation and assessment of de novo modeling with Pathwalking in near atomic resolution cryoEM density maps.J Struct Biol2018
30470765Cryo-EM reveals ligand induced allostery underlying InsP<sub>3</sub>R channel gating.Cell Res2018
28636906Flexible Fitting of Atomic Models into Cryo-EM Density Maps Guided by Helix Correspondences.Biophys J2017
27436409De Novo modeling in cryo-EM density maps with Pathwalking.J Struct Biol2016
26578576EMDataBank unified data resource for 3DEM.Nucleic Acids Res2016
27427982Tandem CAR T cells targeting HER2 and IL13Rα2 mitigate tumor antigen escape.J Clin Invest2016
25581040Corrigendum: Protruding knob-like proteins violate local symmetries in an icosahedral marine virus.Nat Commun2015
26458101Gating machinery of InsP3R channels revealed by electron cryomicroscopy.Nature2015
26163476Domain organization and conformational plasticity of the G protein effector, PDE6.J Biol Chem2015
25809480Domain organization and conformational plasticity of the G protein effector, PDE6.J Biol Chem2015
24836025Multiple functional roles of the accessory I-domain of bacteriophage P22 coat protein revealed by NMR structure and CryoEM modeling.Structure2014
24985522Protruding knob-like proteins violate local symmetries in an icosahedral marine virus.Nat Commun2014
25185801An atomic model of brome mosaic virus using direct electron detection and real-space optimization.Nat Commun2014
23839099TanCAR: A Novel Bispecific Chimeric Antigen Receptor for Cancer Immunotherapy.Mol Ther Nucleic Acids2013
23840063Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling.Proc Natl Acad Sci U S A2013
22405004Constructing and validating initial Cα models from subnanometer resolution density maps with pathwalking.Structure2012
22696403Gorgon and pathwalking: macromolecular modeling tools for subnanometer resolution density maps.Biopolymers2012
22297510Reconstructing virus structures from nanometer to near-atomic resolutions with cryo-electron microscopy and tomography.Adv Exp Med Biol2012
22325770Outcome of the first electron microscopy validation task force meeting.Structure2012
20935055EMDataBank.org: unified data resource for CryoEM.Nucleic Acids Res2011
218291694.4 ÿ cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus.EMBO J2011
21787787Crystal structure of the cytoplasmic N-terminal domain of subunit I, a homolog of subunit a, of V-ATPase.J Mol Biol2011
21296162Modeling protein structure at near atomic resolutions with Gorgon.J Struct Biol2011
21220301Structural basis for scaffolding-mediated assembly and maturation of a dsDNA virus.Proc Natl Acad Sci U S A2011
20090755Mechanism of folding chamber closure in a group II chaperonin.Nature2010
21124809Semi-isometric registration of line features for flexible fitting of protein structures.Comput Graph Forum2010
20888467Analyses of subnanometer resolution cryo-EM density maps.Methods Enzymol2010
20885381Cryo-EM of macromolecular assemblies at near-atomic resolution.Nat Protoc2010
20487508Tracing conformational changes in proteins.BMC Struct Biol2010
20543830Structural changes in a marine podovirus associated with release of its genome into Prochlorococcus.Nat Struct Mol Biol2010
201947874.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement.Proc Natl Acad Sci U S A2010
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Collaborators

Wah Chiu
Stanford University
Co-authored papers 47
Steven J Ludtke
Baylor College of Medicine
Co-authored papers 18
Wen Jiang
Purdue University. Electronic address: .
Co-authored papers 18
Nabil Ahmed
Co-authored papers 8
Michael F Schmid
Stanford University
Co-authored papers 8
Irina I Serysheva
McGovern Medical School at The University of Texas Health Science Center at Houston
Co-authored papers 8
Meenakshi Hegde
Co-authored papers 8
Matthew T Dougherty
Baylor College of Medicine
Co-authored papers 6
Zhen-Hong Zhou
Co-authored papers 5
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 4
Susan L Hamilton
Baylor College of Medicine
Co-authored papers 4
Poul H Sorensen
British Columbia Cancer Research Centre
Co-authored papers 4
Paul D Adams
Lawrence Berkeley National Laboratory
Co-authored papers 4
Catherine L Lawson
Institute for Quantitative Biomedicine, State University of New Jersey
Co-authored papers 4
Helen M Berman
The State University of New Jersey
Co-authored papers 4
Frank DiMaio
University of Washington
Co-authored papers 4
Gunnar F Schr??der
Institute of Biological Information Processing (Structural Biochemistry)
Co-authored papers 3
Yao Cong
University of Chinese Academy of Sciences
Co-authored papers 3
Gerard J Kleywegt
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 3
Michael D Taylor
The Hospital for Sick Children
Co-authored papers 3
John D Westbrook
The State University of New Jersey
Co-authored papers 3
Maya Topf
Leibniz-Institut fur Virologie (LIV)
Co-authored papers 3
David Baker
University of Washington
Co-authored papers 3
Fabio Stossi
Co-authored papers 2
Peter B Rosenthal
The Francis Crick Institute
Co-authored papers 2
Christopher R Booth
3Gatan Inc.,Pleasanton,CA,USA.
Co-authored papers 2
Ardan Patwardhan
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 2
Judith Frydman
Stanford University
Co-authored papers 2
Grigore Pintilie
Stanford University
Co-authored papers 2
Rakesh K Jain
Massachusetts General Hospital, Harvard Medical School
Co-authored papers 2
Release 1.2