Skip to Main Content

Author Details

Christina Kendziorski
University of Wisconsin-Madison
1999
112
39
Gloria M Sheynkman (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36796588Rhinovirus C causes heterogeneous infection and gene expression in airway epithelial cell subsets.Mucosal Immunol2023
37873389Targeted inhibition of BET proteins in HPV-16 associated head and neck squamous cell carcinoma reveals heterogeneous transcription response.bioRxiv2023
37131583Genomic Analysis of Human Brain Metastases Treated with Stereotactic Radiosurgery Under the Phase-II Clinical Trial (NCT03398694) Reveals DNA Damage Repair at the Peripheral Tumor Edge.medRxiv2023
34850101Enhancing biological signals and detection rates in single-cell RNA-seq experiments with cDNA library equalization.Nucleic Acids Res2022
35603790β Cell-specific deletion of Zfp148 improves nutrient-stimulated β cell Ca2+ responses.JCI Insight2022
35624112SpotClean adjusts for spot swapping in spatial transcriptomics data.Nat Commun2022
36590683SpatialCorr identifies gene sets with spatially varying correlation structure.Cell Rep Methods2022
35938172Transcriptome Dynamics in the Developing Larynx, Trachea, and Esophagus.Front Cell Dev Biol2022
33428261Novel immortalized human vocal fold epithelial cell line: In vitro tool for mucosal biology.FASEB J2021
37332668A COMPOSITIONAL MODEL TO ASSESS EXPRESSION CHANGES FROM SINGLE-CELL RNA-SEQ DATA.Ann Appl Stat2021
33622236CHARTS: a web application for characterizing and comparing tumor subpopulations in publicly available single-cell RNA-seq data sets.BMC Bioinformatics2021
33647016Interspecies chimeric conditions affect the developmental rate of human pluripotent stem cells.PLoS Comput Biol2021
34491912Identification of direct transcriptional targets of NFATC2 that promote β cell proliferation.J Clin Invest2021
34417264The Anna Karenina Model of β-Cell Maturation in Development and Their Dedifferentiation in Type 1 and Type 2 Diabetes.Diabetes2021
34146085Normalization by distributional resampling of high throughput single-cell RNA-sequencing data.Bioinformatics2021
34281564Microglial responses to CSF1 overexpression do not promote the expansion of other glial lineages.J Neuroinflammation2021
32513247CB2 improves power of cell detection in droplet-based single-cell RNA sequencing data.Genome Biol2020
33069212Ovarian cancer cells direct monocyte differentiation through a non-canonical pathway.BMC Cancer2020
32986734Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis.PLoS One2020
30585657Discordance between histologic and visual assessment of tissue viability in excised burn wound tissue.Wound Repair Regen2019
31815944Automated minute scale RNA-seq of pluripotent stem cell differentiation reveals early divergence of human and mouse gene expression kinetics.PLoS Comput Biol2019
31551422Human induced pluripotent stem cell-derived vocal fold mucosa mimics development and responses to smoke exposure.Nat Commun2019
31461642An In Vitro Human Segmentation Clock Model Derived from Embryonic Stem Cells.Cell Rep2019
31343992Gene loci associated with insulin secretion in islets from non-diabetic mice.J Clin Invest2019
31189664Regionally specified human pluripotent stem cell-derived astrocytes exhibit different molecular signatures and functional properties.Development2019
31100613Reversal of Vocal Fold Mucosal Fibrosis Using siRNA against the Collagen-Specific Chaperone Serpinh1.Mol Ther Nucleic Acids2019
31014251Tissue specific human fibroblast differential expression based on RNAsequencing analysis.BMC Genomics2019
30553439Mechanotransduction of vocal fold fibroblasts and mesenchymal stromal cells in the context of the vocal fold mechanome.J Biomech2019
29567659Genetic Drivers of Pancreatic Islet Function.Genetics2018
30355500Mutations in GFAP Disrupt the Distribution and Function of Organelles in Human Astrocytes.Cell Rep2018
30326833Trendy: segmented regression analysis of expression dynamics in high-throughput ordered profiling experiments.BMC Bioinformatics2018
29474459Correction: Identification of a serum-induced transcriptional signature associated with metastatic cervical cancer.PLoS One2018
28550015Statistical Methods for Latent Class Quantitative Trait Loci Mapping.Genetics2017
28418000SCnorm: robust normalization of single-cell RNA-seq data.Nat Methods2017
28966695IPI59: An Actionable Biomarker to Improve Treatment Response in Serous Ovarian Carcinoma Patients.Stat Biosci2017
29240790Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress.PLoS Biol2017
28854209Identification of a serum-induced transcriptional signature associated with metastatic cervical cancer.PLoS One2017
26837753The Dissection of Expression Quantitative Trait Locus Hotspots.Genetics2016
27935966The Transcription Factor Nfatc2 Regulates β-Cell Proliferation and Genes Associated with Type 2 Diabetes in Mouse and Human Islets.PLoS Genet2016
27782827A statistical approach for identifying differential distributions in single-cell RNA-seq experiments.Genome Biol2016
27753532Histone chaperone ASF1B promotes human β-cell proliferation via recruitment of histone H3.3.Cell Cycle2016
27534536Single-cell RNA-seq reveals novel regulators of human embryonic stem cell differentiation to definitive endoderm.Genome Biol2016
26743507OEFinder: a user interface to identify and visualize ordering effects in single-cell RNA-seq data.Bioinformatics2016
27111284Modeling fibrosis using fibroblasts isolated from scarred rat vocal folds.Lab Invest2016
27052890Design and computational analysis of single-cell RNA-sequencing experiments.Genome Biol2016
25592437Microarray-based characterization of differential gene expression during vocal fold wound healing in rats.Dis Model Mech2015
26412982Comparing gene expression data from formalin-fixed, paraffin embedded tissues and qPCR with that from snap-frozen tissue and microarrays for modeling outcomes of patients with ovarian carcinoma.BMC Clin Pathol2015
26385979Identification of the Bile Acid Transporter Slco1a6 as a Candidate Gene That Broadly Affects Gene Expression in Mouse Pancreatic Islets.Genetics2015
26301841Oscope identifies oscillatory genes in unsynchronized single-cell RNA-seq experiments.Nat Methods2015
26290572Identification and Correction of Sample Mix-Ups in Expression Genetic Data: A Case Study.G3 (Bethesda)2015
  • 1 - 50 of 112

Recommended Authors

Michael I Love
University of North Carolina at Chapel Hill
Career Start Year 2011
Number of shared co-authors 2
Oliver Stegle
Wellcome Sanger Institute
Career Start Year 2008
Number of shared co-authors 6
Matthew E Ritchie
The University of Melbourne
Career Start Year 2006
Number of shared co-authors 2
Joshua W K Ho
The University of Hong Kong
Career Start Year 2006
Number of shared co-authors 0
Jessica C Mar
Australian Institute for Bioengineering and Nanotechnology, University of Queensland
Career Start Year 2005
Number of shared co-authors 0
Maria Chikina
University of Pittsburgh
Career Start Year 2005
Number of shared co-authors 0
Stephen A Ramsey
Oregon State University
Career Start Year 2004
Number of shared co-authors 0
John C Marioni
Cancer Research UK Cambridge Institute, University of Cambridge
Career Start Year 2004
Number of shared co-authors 2
Haiyan Huang
Washington State University
Career Start Year 2004
Number of shared co-authors 0
Gerald Quon
University of California davis
Career Start Year 2003
Number of shared co-authors 0
Zhandong Liu
Jan and Dan Duncan Neurological Research Institute at Texas Children's Hospital
Career Start Year 2003
Number of shared co-authors 4
Terence P Speed
Walter and Eliza Hall Institute of Medical Research
Career Start Year 2003
Number of shared co-authors 0
Mark Reimers
Institute for Quantitative Health Science and Engineering, Michigan State University
Career Start Year 2002
Number of shared co-authors 0
Sven Bergmann
University of Lausanne
Career Start Year 2002
Number of shared co-authors 4
George C Tseng
University of Pittsburgh School of Public Health
Career Start Year 2001
Number of shared co-authors 0
Jean Yee Hwa Yang
The University of Sydney
Career Start Year 2001
Number of shared co-authors 1
Mikhail G Dozmorov
Virginia Commonwealth University
Career Start Year 2001
Number of shared co-authors 0
Stefan Bekiranov
University of Virginia
Career Start Year 2000
Number of shared co-authors 0
Elisabetta Manduchi
Center for Spatial and Functional Genomics, Children's Hospital of Philadelphia
Career Start Year 1999
Number of shared co-authors 1
Gregory R Grant
Perelman School of Medicine, University of Pennsylvania Philadelphia
Career Start Year 1999
Number of shared co-authors 1
Shannon K McWeeney
Oregon Health & Science University, University of California Berkeley
Career Start Year 1997
Number of shared co-authors 16
Mark D Robinson
University of Zurich
Career Start Year 1997
Number of shared co-authors 1
Wolfgang Huber
Technische Universitat Munchen
Career Start Year 1995
Number of shared co-authors 2
Fabian J Theis
Technical University of Munich
Career Start Year 1992
Number of shared co-authors 1
Gordon K Smyth
The University of Melbourne
Career Start Year 1992
Number of shared co-authors 2
Wing Hung Wong
Stanford University
Career Start Year 1991
Number of shared co-authors 1
Robert Gentleman
Center for Computational Biomedicine, Harvard Medical School
Career Start Year 1991
Number of shared co-authors 2
John Quackenbush
Harvard T. H. Chan School of Public Health
Career Start Year 1989
Number of shared co-authors 5
Michael F Ochs
The College of New Jersey
Career Start Year 1988
Number of shared co-authors 0
Yuval Kluger
Yale University School of Medicine
Career Start Year 1984
Number of shared co-authors 0

Collaborators

Ron Stewart
Co-authored papers 14
James A Thomson
Co-authored papers 13
Rhonda Bacher
University of Florida
Co-authored papers 12
Michael A Newton
University of Wisconsin School of Medicine and Public Health
Co-authored papers 10
Karl W Broman
Co-authored papers 8
Eric E Schadt
Icahn School of Medicine at Mount Sinai
Co-authored papers 7
Elias Chaibub Neto
University of Wisconsin-Madison.
Co-authored papers 4
Scott Swanson
Co-authored papers 4
Gary A Churchill
Tufts University
Co-authored papers 3
Danielle M Greenawalt
Bristol-Myers Squibb Co.
Co-authored papers 3
Audrey P Gasch
University of Wisconsin-Madison
Co-authored papers 3
Peter J Tonellato
University of Missouri School of Medicine
Co-authored papers 2
Howard J Jacob
Genomics Research Center
Co-authored papers 2
Robert W Williams
Mayo Clinic
Co-authored papers 2
Lloyd M Smith
University of Wisconsin-Madison College of Letters and Sciences
Co-authored papers 2
Daniel M Gatti
Center for Computational Sciences
Co-authored papers 2
James E Gern
University of Wisconsin School of Medicine and Public Health
Co-authored papers 2
Gopal Iyer
University of Wisconsin School of Medicine and Public Health, University of Wisconsin
Co-authored papers 2
Abraham A Palmer
McMaster University & St. Joseph's Healthcare Hamilton
Co-authored papers 1
Marc K Hellerstein
University of California berkeley
Co-authored papers 1
David C Schwartz
University of Wisconsin-Madison
Co-authored papers 1
Fuad A Iraqi
Co-authored papers 1
Karen L Svenson
Co-authored papers 1
Bin Zhang
Graduate School of Medicine, The University of Tokyo
Co-authored papers 1
Charles R Farber
University of Virginia
Co-authored papers 1
Michael Olivier
Co-authored papers 1
Victor Ruotti
Co-authored papers 1
Nitin S Baliga
Institute for Systems Biology
Co-authored papers 1
Colin N Dewey
Co-authored papers 1
Zhidong Tu
Co-authored papers 1
Release 1.2