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Author Details

Alexander Kanapin
1994
62
29
PMIDPaper TitleJournal TitlePublished Year
37228014Pygenomics: manipulating genomic intervals and data files in Python.2023
36841868Long non-coding RNA-derived peptides are immunogenic and drive a potent anti-tumour response.2023
37024526A collection of read depth profiles at structural variant breakpoints.2023
36769014Transcriptomic Analysis of Flowering Time Genes in Cultivated Chickpea and Wild .2023
36675784Host Genetic Variants Linked to COVID-19 Neurological Complications and Susceptibility in Young Adults-A Preliminary Analysis.2023
35146091An account of Fusarium wilt resistance in flax : The disease severity data.Data in Brief2022
36498863Genetic Determinants of Fiber-Associated Traits in Flax Identified by Omics Data Integration.2022
36551763A Genome-Wide Association Study Reveals a -Centered Molecular Network Associated with Alcohol Dependence and Related Clinical Measures.2022
34950165The Genetic Landscape of Fiber Flax.Frontiers in Plant Science2021
33800857A Genomic Blueprint of Flax Fungal Parasite f. sp. .International Journal of Molecular Sciences2021
34189209A comprehensive dataset of flax ( L.) phenotypes.Data in Brief2021
33065217A genome-wide association study identifies a gene network associated with paranoid schizophrenia and antipsychotics-induced tardive dyskinesia.Progress in Neuro-Psychopharmacology and Biological Psychiatry2021
34833085Stochastic Effects in Retrotransposon Dynamics Revealed by Modeling under Competition for Cellular Resources.Life2021
32568599The Genome Sequence of Five Highly Pathogenic Isolates of f. sp. .Molecular Plant-Microbe Interactions2020
32055257Characterising a human endogenous retrovirus(HERV)-derived tumour-associated antigen: enriched RNA-Seq analysis of HERV-K(HML-2) in mantle cell lymphoma cell lines.Mobile DNA2020
32462093Current challenges and possible future developments in personalized psychiatry with an emphasis on psychotic disorders.Heliyon2020
32709847PRMT5 promotes cancer cell migration and invasion through the E2F pathway.Cell Death and Disease2020
31249870Arginine methylation expands the regulatory mechanisms and extends the genomic landscape under E2F control.Science advances2019
29149249Human Accelerated Regions and Other Human-Specific Sequence Variations in the Context of Evolution and Their Relevance for Brain Development.Genome Biology and Evolution2018
29388947Clinical whole-genome sequencing from routine formalin-fixed, paraffin-embedded specimens: pilot study for the 100,000 Genomes Project.Genet Med2018
29382819RASSF1A uncouples Wnt from Hippo signalling and promotes YAP mediated differentiation via p73.Nat Commun2018
29016847A point mutation in the ion conduction pore of AMPA receptor GRIA3 causes dramatically perturbed sleep patterns as well as intellectual disability.Hum Mol Genet2017
27926874Multivalent Histone and DNA Engagement by a PHD/BRD/PWWP Triple Reader Cassette Recruits ZMYND8 to K14ac-Rich Chromatin.Cell Rep2016
27805906Interplay between RNA interference and heat shock response systems in Drosophila melanogaster.Open Biol2016
26242354Disruption of SF3B1 results in deregulated expression and splicing of key genes and pathways in myelodysplastic syndrome hematopoietic stem and progenitor cells.Leukemia2015
25428262Disruption of SF3B1 results in deregulated expression and splicing of key genes and pathways in myelodysplastic syndrome hematopoietic stem and progenitor cells.Leukemia2015
25985138Factors influencing success of clinical genome sequencing across a broad spectrum of disorders.Nat Genet2015
24920817Unfixed endogenous retroviral insertions in the human population.Journal of Virology2014
24463883Clinical whole-genome sequencing in severe early-onset epilepsy reveals new genes and improves molecular diagnosis.Hum Mol Genet2014
24944579Choice of transcripts and software has a large effect on variant annotation.Genome Med2014
23354436Mutations in TCF12, encoding a basic helix-loop-helix partner of TWIST1, are a frequent cause of coronal craniosynostosis.Nat Genet2013
24262833Neanderthal and Denisovan retroviruses in modern humans.Current Biology2013
23236289Recessive mutations in SPTBN2 implicate β-III spectrin in both cognitive and motor development.PLoS Genet2012
20158875Projection of gene-protein networks to the functional space of the proteome and its application to analysis of organism complexity.BMC Genomics2010
18981052Reactome knowledgebase of human biological pathways and processes.Nucleic Acids Res2009
17202162New developments in the InterPro database.Nucleic Acids Res2007
16909843[InterPro as a new tool for whole genome analysis. A comparative analysis of Mycobacterium tuberculosis, Bacillus subtilis and Escherichia coli as a case study].Biofizika2006
16141072The transcriptional landscape of the mammalian genome.Science2005
15608201Integr8 and Genome Reviews: integrated views of complete genomes and proteomes.Nucleic Acids Res2005
15608177InterPro, progress and status in 2005.Nucleic Acids Res2005
15103394Integrative annotation of 21,037 human genes validated by full-length cDNA clones.PLoS Biol2004
12819131Mouse proteome analysis.Genome Res2003
12529635Systematic functional analysis of the Caenorhabditis elegans genome using RNAi.Nature2003
12520037The Proteome Analysis database: a tool for the in silico analysis of whole proteomes.Nucleic Acids Res2003
12520011The InterPro Database, 2003 brings increased coverage and new features.Nucleic Acids Res2003
12819153Development and evaluation of an automated annotation pipeline and cDNA annotation system.Genome Res2003
11847096Interactive InterPro-based comparisons of proteins in whole genomes.Bioinformatics2002
12230037Applications of InterPro in protein annotation and genome analysis.Brief Bioinform2002
12230031InterPro: an integrated documentation resource for protein families, domains and functional sites.Brief Bioinform2002
12466851Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.Nature2002
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University of Cape Town
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European Bioinformatics Institute (EMBL-EBI)
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The EMBL Outstation - The European Bioinformatics Institute
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University of Cambridge
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European Bioinformatics Institute
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Medical Research Council Laboratory of Molecular Biology
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European Bioinformatics Institute (EMBL-EBI)
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University of Geneva
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University of Geneva
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University of Oxford
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Osaka University
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University of Oxford
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University of Geneva Medical School
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EMBL's European Bioinformatics Institute (EMBL-EBI)
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Harvard T. H. Chan School of Public Health
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Hiroshima University
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RIKEN Center for Integrative Medical Sciences
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University of Wurzburg
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Intractable Disease Research Center, Graduate School of Medicine, Juntendo University
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Big Data Institute, University of Oxford
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