Author details

Full Name

Melissa J Hubisz

Affiliation

ORCID

Career Start Year

2004

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36848554	The evolution of the human DNA replication timing program.		2023
37612508	Non-cell-autonomous cancer progression from chromosomal instability.	Nature	2023
33199636	Genomic islands of differentiation in a rapid avian radiation have been driven by recent selective sweeps.	Proceedings of the National Academy of Sciences of the United States of America	2020
31975170	Inference of Ancestral Recombination Graphs Using ARGweaver.	Methods in Molecular Biology	2020
32760067	Mapping gene flow between ancient hominins through demography-aware inference of the ancestral recombination graph.	PLoS Genetics	2020
31712408	Parallel evolution of ancient, pleiotropic enhancers underlies butterfly wing pattern mimicry.	Proceedings of the National Academy of Sciences of the United States of America	2019
26886800	Ancient gene flow from early modern humans into Eastern Neanderthals.	Nature	2016
27153702	SweepFinder2: increased sensitivity, robustness and flexibility.	Bioinformatics	2016
25599402	A method for calculating probabilities of fitness consequences for point mutations across the human genome.	Nature Genetics	2015
24831947	Genome-wide inference of ancestral recombination graphs.	PLoS Genetics	2014
25156517	Exploring the genesis and functions of Human Accelerated Regions sheds light on their role in human evolution.	Curr Opin Genet Dev	2014
23966869	A model-based analysis of GC-biased gene conversion in the human and chimpanzee genomes.	PLoS Genet	2013
23749186	Genome-wide inference of natural selection on human transcription factor binding sites.	Nature Genetics	2013
22075116	The role of GC-biased gene conversion in shaping the fastest evolving regions of the human genome.	Mol Biol Evol	2012
22617954	Replacing and additive horizontal gene transfer in Streptococcus.	Molecular Biology and Evolution	2012
21993624	A high-resolution map of human evolutionary constraint using 29 mammals.	Nature	2011
21340033	Error and error mitigation in low-coverage genome assemblies.	PLoS One	2011
21282711	Comparative genomic analysis of the Streptococcus dysgalactiae species group: gene content, molecular adaptation, and promoter evolution.	Genome Biology and Evolution	2011
21278375	PHAST and RPHAST: phylogenetic analysis with space/time models.	Brief Bioinform	2011
21926973	Bayesian inference of ancient human demography from individual genome sequences.	Nature Genetics	2011
19858363	Detection of nonneutral substitution rates on mammalian phylogenies.	Genome Res	2010
20711490	A simple genetic architecture underlies morphological variation in dogs.	PLoS Biol	2010
21564903	Inferring weak population structure with the assistance of sample group information.	Mol Ecol Resour	2009
19713326	Targets of balancing selection in the human genome.	Mol Biol Evol	2009
19279335	Darwinian and demographic forces affecting human protein coding genes.	Genome Res	2009
18288194	Proportionally more deleterious genetic variation in European than in African populations.	Nature	2008
18670650	Patterns of positive selection in six Mammalian genomes.	PLoS Genet	2008
17041152	Maximum likelihood estimation of ancestral codon usage bias parameters in Drosophila.	Molecular Biology and Evolution	2007
18000010	Patterns of mutation and selection at synonymous sites in Drosophila.	Molecular Biology and Evolution	2007
17284599	Adaptive genic evolution in the Drosophila genomes.	Proc Natl Acad Sci U S A	2007
17994087	Evolution of genes and genomes on the Drosophila phylogeny.	Nature	2007
17943193	Recent and ongoing selection in the human genome.	Nat Rev Genet	2007
17542651	Localizing recent adaptive evolution in the human genome.	PLoS Genet	2007
17675366	Genes under positive selection in Escherichia coli.	Genome Research	2007
17431167	Evolutionary and biomedical insights from the rhesus macaque genome.	Science	2007
17431170	Demographic histories and patterns of linkage disequilibrium in Chinese and Indian rhesus macaques.	Science	2007
16237444	Natural selection on protein-coding genes in the human genome.	Nature	2005
15662372	Evolutionary genomics: detecting selection needs comparative data.	Nature	2005
15869325	A scan for positively selected genes in the genomes of humans and chimpanzees.	PLoS Biol	2005
16251459	Ascertainment bias in studies of human genome-wide polymorphism.	Genome Res	2005
16251466	Genomic scans for selective sweeps using SNP data.	Genome Res	2005
15632085	Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution.	Genome Res	2005
15961449	Detecting coevolving amino acid sites using Bayesian mutational mapping.	Bioinformatics	2005
15371362	Reconstituting the frequency spectrum of ascertained single-nucleotide polymorphism data.	Genetics	2004