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Author Details

Wenguang Shao
Institute of Molecular Systems Biology, ETH Zurich
2011
18
11
PMIDPaper TitleJournal TitlePublished Year
36717752Integrated multi-omics reveals anaplerotic rewiring in methylmalonyl-CoA mutase deficiency.Nat Metab2023
37749212A computational framework for the inference of protein complex remodeling from whole-proteome measurements.Nat Methods2023
35724564PCfun: a hybrid computational framework for systematic characterization of protein complex function.Brief Bioinform2022
33728422Data-independent acquisition-based proteome and phosphoproteome profiling across six melanoma cell lines reveals determinants of proteotypes.Mol Omics2021
32124319The SysteMHC Atlas: a Computational Pipeline, a Website, and a Data Repository for Immunopeptidomic Analyses.Methods Mol Biol2020
33287124Differential Diagnosis of Preeclampsia Based on Urine Peptidome Features Revealed by High Resolution Mass Spectrometry.Diagnostics (Basel)2020
32795611DPHL: A DIA Pan-human Protein Mass Spectrometry Library for Robust Biomarker Discovery.Genomics Proteomics Bioinformatics2020
31175306Comparative analysis of mRNA and protein degradation in prostate tissues indicates high stability of proteins.Nat Commun2019
28985418The SysteMHC Atlas project.Nucleic Acids Res2018
30084848A tissue-based draft map of the murine MHC class I immunopeptidome.Sci Data2018
27403644Tandem mass spectral libraries of peptides and their roles in proteomics research.Mass Spectrom Rev2017
29089484Systematic proteome and proteostasis profiling in human Trisomy 21 fibroblast cells.Nat Commun2017
26395646A peptide identification-free, genome sequence-independent shotgun proteomics workflow for strain-level bacterial differentiation.Sci Rep2015
24625782Tracking the sources of blood meals of parasitic arthropods using shotgun proteomics and unidentified tandem mass spectral libraries.Nat Protoc2014
23675732Denoising peptide tandem mass spectra for spectral libraries: a Bayesian approach.J Proteome Res2013
24115759Refining similarity scoring to enable decoy-free validation in spectral library searching.Proteomics2013
23612287Identifying sources of tick blood meals using unidentified tandem mass spectral libraries.Nat Commun2013
21298786Understanding the improved sensitivity of spectral library searching over sequence database searching in proteomics data analysis.Proteomics2011
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Collaborators

Ruedi Aebersold
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 9
Patrick G A Pedrioli
Institute of Translational Medicine, Swiss Federal Institute of Technology/ETH Zurich
Co-authored papers 5
Yansheng Liu
Yale University School of Medicine
Co-authored papers 3
Marija Buljan
Sestre milosrdnice University Hospital Centre
Co-authored papers 3
Gunnar R??tsch
ETH Zurich
Co-authored papers 2
Eric W Deutsch
Institute for Systems Biology
Co-authored papers 2
Tiannan Guo
Westlake University
Co-authored papers 2
Andreas Beyer
University of Cologne
Co-authored papers 2
David S Campbell
Co-authored papers 2
Evan G Williams
University of Luxembourg
Co-authored papers 2
Anthony W Purcell
Monash Biomedicine Discovery Institute, Monash University
Co-authored papers 2
Robert L Moritz
Institute for Systems Biology
Co-authored papers 2
Albert J R Heck
Utrecht University
Co-authored papers 1
Jiangning Song
Monash Data Futures Institute, Monash University
Co-authored papers 1
Arie Admon
Co-authored papers 1
Rodolfo Ciuffa
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 1
Juan Antonio Vizca??no
EMBL-European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 1
Geert J L H van Leenders
Erasmus MC Cancer Institute, University Medical Center
Co-authored papers 1
Ulrich Wagner
Co-authored papers 1
Connie R Jimenez
Co-authored papers 1
Alessandro Sette
Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology
Co-authored papers 1
Sandra Goetze
ETH Zurich
Co-authored papers 1
Bjoern Peters
University of Washington School of Medicine
Co-authored papers 1
Bernd Wollscheid
ETH Zurich
Co-authored papers 1
Tobias Weiss
Westlake University
Co-authored papers 1
Mar??a Rodr??guez Mart??nez
Herbert Irving Cancer Research Center, Columbia University Medical Center
Co-authored papers 1
Varun S Sharma
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 1
Catherine E Costello
Center for Biomedical Mass Spectrometry, Boston University
Co-authored papers 1
Hua Tang
Stanford University School of Medicine
Co-authored papers 1
Ben C Collins
Queen's University of Belfast
Co-authored papers 1
Release 1.2