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Author Details

Rodolphe Barrangou
Innovative Genomics Institute, University of California berkeley
2002
232
58
PMIDPaper TitleJournal TitlePublished Year
37889041CasPEDIA Database: a functional classification system for class 2 CRISPR-Cas enzymes.Nucleic Acids Res2024
36838369Impact of Pomegranate on Probiotic Growth, Viability, Transcriptome and Metabolism.Microorganisms2023
37594269CRISPR Milestones for Sustainable Agriculture and Forestry.CRISPR J2023
38011612The Expanding Dissemination and Distribution Patterns of Diverse CRISPR Plasmids by Addgene.CRISPR J2023
38052047First Drug Approval Rises the CRISPR Tide.CRISPR J2023
37824835The CRISPR Toolbox: The End of the Beginning.CRISPR J2023
37444193Genome-Wide Comparative Analysis of <i>Lactiplantibacillus pentosus</i> Isolates Autochthonous to Cucumber Fermentation Reveals Subclades of Divergent Ancestry.Foods2023
37440632Multiplex CRISPR editing of wood for sustainable fiber production.Science2023
37272860CRISPR Conventions in a Polarized Era.CRISPR J2023
37071671Amplifying CRISPR: Next-Generation Diagnostics.CRISPR J2023
37071669<i>Special Issue</i>: Manipulating the Microbiome with CRISPR.CRISPR J2023
36787118CRISPR Crops and Sustainable Agriculture.CRISPR J2023
36914755Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut.Nat Microbiol2023
35026132Turning CRISPR on with antibiotics.Cell Host Microbe2022
38046906Probiotic colonization dynamics after oral consumption of VSL#3<sup>®</sup> by antibiotic-treated mice.Microbiome Res Rep2022
38046360<i>Lactobacillus</i>, glycans and drivers of health in the vaginal microbiome.Microbiome Res Rep2022
35857876Genomic and epigenetic landscapes drive CRISPR-based genome editing in <i>Bifidobacterium</i>.Proc Natl Acad Sci U S A2022
35663851Metabolomic Analysis of <i>Lactobacillus acidophilus, L. gasseri, L. crispatus</i>, and <i>Lacticaseibacillus rhamnosus</i> Strains in the Presence of Pomegranate Extract.Front Microbiol2022
35783410Clustered Regularly Interspaced Short Palindromic Repeats Genotyping of Multidrug-Resistant <i>Salmonella</i> Heidelberg Strains Isolated From the Poultry Production Chain Across Brazil.Front Microbiol2022
35686974Celebrating a Decade of CRISPR-Fueled Genome Editing.CRISPR J2022
36512349Better Guidance for CRISPR.CRISPR J2022
35972366Navigating Viral Space with CRISPR Technologies.CRISPR J2022
36384163Functional characterization of diverse type I-F CRISPR-associated transposons.Nucleic Acids Res2022
36260300Extreme Genome Editing.CRISPR J2022
36343261CRISPR-based engineering of phages for in situ bacterial base editing.Proc Natl Acad Sci U S A2022
36316451Broad-spectrum CRISPR-Cas13a enables efficient phage genome editing.Nat Microbiol2022
35191754CRISPR Rewrites the Future of Medicine.CRISPR J2022
34873292Species- and site-specific genome editing in complex bacterial communities.Nat Microbiol2022
32912589Whole-genome sequencing analysis and CRISPR genotyping of rare antibiotic-resistant Salmonella enterica serovars isolated from food and related sources.Food Microbiol2021
33876952The CRISPR Chronicles and the Power of Storytelling.CRISPR J2021
33570455(Broken) Promises of Sustainable Food and Agriculture through New Biotechnologies: The CRISPR Case.CRISPR J2021
33616437Political Support Sets the Tone for CRISPR Enthusiasts.CRISPR J2021
33526676<i>Lactobacillus</i> bile salt hydrolase substrate specificity governs bacterial fitness and host colonization.Proc Natl Acad Sci U S A2021
33500337<i>In Vivo</i> Transcriptome of Lactobacillus acidophilus and Colonization Impact on Murine Host Intestinal Gene Expression.mBio2021
34935490CRISPR Milestones and Anticipating What Is Next for the Journal.CRISPR J2021
34789569Opinion: Toward inclusive global governance of human genome editing.Proc Natl Acad Sci U S A2021
34406047CRISPRclassify: Repeat-Based Classification of CRISPR Loci.CRISPR J2021
34406045Clinical Milestone for CRISPR Medicines.CRISPR J2021
34661431As CRISPR Technologies Ripen, What Should We Prioritize?CRISPR J2021
34661427Determination of Factors Driving the Genome Editing Field in the CRISPR Era Using Bibliometrics.CRISPR J2021
34803983Comparative Genomic Analyses and CRISPR-Cas Characterization of <i>Cutibacterium acnes</i> Provide Insights Into Genetic Diversity and Typing Applications.Front Microbiol2021
34011677Todd R. Klaenhammer, an inspirational food microbiologist who leaves a lasting legacy.Proc Natl Acad Sci U S A2021
33397707Portable CRISPR-Cas9<sup>N</sup> System for Flexible Genome Engineering in Lactobacillus acidophilus, Lactobacillus gasseri, and Lactobacillus paracasei.Appl Environ Microbiol2021
33348992Building a Resilient, Sustainable, and Healthier Food Supply Through Innovation and Technology.Annu Rev Food Sci Technol2021
32156803<i>In Vivo</i> Targeting of Clostridioides difficile Using Phage-Delivered CRISPR-Cas3 Antimicrobials.mBio2020
33575551Host and body site-specific adaptation of <i>Lactobacillus crispatus</i> genomes.NAR Genom Bioinform2020
33560910Finding SECURE Ground: USDA Edits the Biotechnology Regulatory Framework.CRISPR J2020
31922192Characterization and applications of Type I CRISPR-Cas systems.Biochem Soc Trans2020
31857715Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants.Nat Rev Microbiol2020
32038579Comparative Analysis of <i>Lactobacillus gasseri</i> and <i>Lactobacillus crispatus</i> Isolated From Human Urogenital and Gastrointestinal Tracts.Front Microbiol2020
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Collaborators

College of Veterinary Medicine, North Carolina State University
Co-authored papers 8
Innovative Genomics Institute, University of California berkeley
Co-authored papers 5
Co-authored papers 4
Center for Food Safety and Applied Nutrition, College Park
Co-authored papers 4
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 3
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Co-authored papers 3
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Co-authored papers 1
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Co-authored papers 1
Arizona State University
Co-authored papers 1
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Co-authored papers 1
Massachusetts Institute of Technology, USA Broad Institute
Co-authored papers 1
Co-authored papers 1
Center for Genomic Science Innovation, University of Wisconsin-Madison
Co-authored papers 1
Murdoch Children's Research Institute
Co-authored papers 1
Innovative Genomics Institute, University of California berkeley
Co-authored papers 1
College of Health and Medicine, The Australian National University
Co-authored papers 1
National Centre for Biotechnology (CNB-CSIC)
Co-authored papers 1
University of Tennessee Knoxville
Co-authored papers 1
Dalla Lana School of Public Health, University of Toronto
Co-authored papers 1
Universidade Federal de Sao Paulo
Co-authored papers 1
University of California at San Diego
Co-authored papers 1
North Carolina State University
Co-authored papers 1
Lawrence Berkeley National Laboratory
Co-authored papers 1
Co-authored papers 1
University of KwaZulu-Natal
Co-authored papers 1
Arizona State University.
Co-authored papers 1
University of North Carolina at Chapel Hill
Co-authored papers 1
Harvard Medical School, USA Infectious Disease Institute (P.J.M.B.
Co-authored papers 1
Portland State University
Co-authored papers 1
University of North Carolina School of Medicine
Co-authored papers 1