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Author Details

Jianfeng Li
Mitchell Cancer Institute, University of South Alabama
2008
28
17
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36515828Quantitative Analysis of Nuclear Poly(ADP-Ribose) Dynamics in Response to Laser-Induced DNA Damage.Methods Mol Biol2023
37220749A multi-scale map of protein assemblies in the DNA damage response.Cell Syst2023
35892832Overcoming Temozolomide Resistance in Glioblastoma via Enhanced NAD<sup>+</sup> Bioavailability and Inhibition of Poly-ADP-Ribose Glycohydrolase.Cancers (Basel)2022
36110898A high-throughput 384-well CometChip platform reveals a role for 3-methyladenine in the cellular response to etoposide-induced DNA damage.NAR Genom Bioinform2022
35954352Live Cell Detection of Poly(ADP-Ribose) for Use in Genetic and Genotoxic Compound Screens.Cancers (Basel)2022
34806016NAD<sup>+</sup> bioavailability mediates PARG inhibition-induced replication arrest, intra S-phase checkpoint and apoptosis in glioma stem cells.NAR Cancer2021
34934174A specific inhibitor of ALDH1A3 regulates retinoic acid biosynthesis in glioma stem cells.Commun Biol2021
34731617Temporal dynamics of base excision/single-strand break repair protein complex assembly/disassembly are modulated by the PARP/NAD<sup>+</sup>/SIRT6 axis.Cell Rep2021
34548489SON drives oncogenic RNA splicing in glioblastoma by regulating PTBP1/PTBP2 switching and RBFOX2 activity.Nat Commun2021
33046907Regulation of ALT-associated homology-directed repair by polyADP-ribosylation.Nat Struct Mol Biol2020
31959836Extracellular NAD<sup>+</sup> enhances PARP-dependent DNA repair capacity independently of CD73 activity.Sci Rep2020
30167090DNA Repair Molecular Beacon assay: a platform for real-time functional analysis of cellular DNA repair capacity.Oncotarget2018
27994057FOXO3 Transcription Factor Is Essential for Protecting Hematopoietic Stem and Progenitor Cells from Oxidative DNA Damage.J Biol Chem2017
29021553Development of a Cell-Based Assay for Measuring Base Excision Repair Responses.Sci Rep2017
28003368UBE3B Is a Calmodulin-regulated, Mitochondrion-associated E3 Ubiquitin Ligase.J Biol Chem2017
26234675JAK2V617F mediates resistance to DNA damage-induced apoptosis by modulating FOXO3A localization and Bcl-xL deamidation.Oncogene2016
27820808Oxidative guanine base damage regulates human telomerase activity.Nat Struct Mol Biol2016
27759097Crystal structure of human aldehyde dehydrogenase 1A3 complexed with NAD<sup>+</sup> and retinoic acid.Sci Rep2016
27453043A Network of Conserved Synthetic Lethal Interactions for Exploration of Precision Cancer Therapy.Mol Cell2016
25458053A novel strategy for targeted killing of tumor cells: Induction of multipolar acentrosomal mitotic spindles with a quinazolinone derivative mdivi-1.Mol Oncol2015
26251826Gene expression profiling distinguishes proneural glioma stem cells from mesenchymal glioma stem cells.Genom Data2015
26437225Chemogenetic profiling identifies RAD17 as synthetically lethal with checkpoint kinase inhibition.Oncotarget2015
25220464ARTD1/PARP1 negatively regulates glycolysis by inhibiting hexokinase 1 independent of NAD+ depletion.Cell Rep2014
23311711Base excision repair facilitates a functional relationship between Guanine oxidation and histone demethylation.Antioxid Redox Signal2013
23650391Mesenchymal glioma stem cells are maintained by activated glycolytic metabolism involving aldehyde dehydrogenase 1A3.Proc Natl Acad Sci U S A2013
23038810Alkylation sensitivity screens reveal a conserved cross-species functionome.Mol Cancer Res2012
23226616Transcriptional profiling reveals elevated Sox2 in DNA polymerase ÿ null mouse embryonic fibroblasts.Am J Cancer Res2012
18246049Whole genome SNP arrays as a potential diagnostic tool for the detection of characteristic chromosomal aberrations in renal epithelial tumors.Mod Pathol2008
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Collaborators

Robert W Sobol
University of South Alabama
Co-authored papers 26
Christopher A Koczor
Mitchell Cancer Institute, University of South Alabama
Co-authored papers 6
Uma R Chandran
Co-authored papers 4
Nathan A Yates
University of Pittsburgh School of Medicine
Co-authored papers 3
Trey Ideker (CM4AI)
University of California San Diego
Co-authored papers 3
Soumya Luthra
Co-authored papers 3
Katherine Licon
University of California San Diego
Co-authored papers 3
Ana Bojorquez-Gomez
University of California
Co-authored papers 2
Su Ming Sun
Leiden University Medical Center
Co-authored papers 2
Panayiotis V Benos
University of Florida
Co-authored papers 2
Kristin Klepper
University of California San Diego
Co-authored papers 2
Huwate Yeerna
Moores Cancer Center, University of California
Co-authored papers 2
Shi-Yuan Cheng
Northwestern University Feinberg School of Medicine
Co-authored papers 2
Vignesh Sivaganesh
University of the Sciences
Co-authored papers 2
John Paul Shen
The University of Texas MD Anderson Cancer Center
Co-authored papers 2
Bennett Van Houten
UPMC-Hillman Cancer Center, University of Pittsburgh
Co-authored papers 2
Bo Hu
Northwestern University Feinberg School of Medicine
Co-authored papers 2
Rohith Srivas
Amgen Inc.
Co-authored papers 2
Haico van Attikum
Leiden University Medical Center
Co-authored papers 2
Jia L Xu
Stem Cell Program and Institute for Genomic Medicine, University of California
Co-authored papers 2
Daniel Pekin
University of California
Co-authored papers 2
Andrew M Gross
Illumina Inc.
Co-authored papers 2
Maya Modak
Co-authored papers 1
Eric J Jaehnig
Baylor College of Medicine
Co-authored papers 1
Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 1
Jisoo Park
University of California San Diego san francisco
Co-authored papers 1
Carlos J Camacho
University of Pittsburgh
Co-authored papers 1
Dexter Pratt (CM4AI)
UC San Diego
Co-authored papers 1
Yue Qin
University of California San Diego
Co-authored papers 1
Jing Chen
College of Bioinformatics Science and Technology, Harbin Medical University
Co-authored papers 1
Release 1.2