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Author Details

Konstantin Okonechnikov
Hopp Children's Cancer Center Heidelberg (KiTZ)
2012
38
18
Antoine Forget (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36635768Comparison of transcriptome profiles between medulloblastoma primary and recurrent tumors uncovers novel variance effects in relapses.Acta Neuropathol Commun2023
370855393D genome mapping identifies subgroup-specific chromosome conformations and tumor-dependency genes in ependymoma.Nat Commun2023
37093271Transcriptome analysis stratifies second-generation non-WNT/non-SHH medulloblastoma subgroups into clinically tractable subtypes.Acta Neuropathol2023
34702771Clinically Tractable Outcome Prediction of Non-WNT/Non-SHH Medulloblastoma Based on TPD52 IHC in a Multicohort Study.Clin Cancer Res2022
35771282Gene expression profiling of Group 3 medulloblastomas defines a clinically tractable stratification based on KIRREL2 expression.Acta Neuropathol2022
35417950[Application of high throughput sequencing in pediatric neurooncology].Arkh Patol2022
33249490The genetic landscape of choroid plexus tumors in children and adults.Neuro Oncol2021
33627664Alternative lengthening of telomeres in childhood neuroblastoma from genome to proteome.Nat Commun2021
33879448Cross-Species Genomics Reveals Oncogenic Dependencies in ZFTA/C11orf95 Fusion-Positive Supratentorial Ependymomas.Cancer Discov2021
33762301Notch Signaling between Cerebellar Granule Cell Progenitors.eNeuro2021
33589929Integrated molecular analysis of adult sonic hedgehog (SHH)-activated medulloblastomas reveals two clinically relevant tumor subsets with VEGFA as potent prognostic indicator.Neuro Oncol2021
33536079Molecular analysis of pediatric CNS-PNET revealed nosologic heterogeneity and potent diagnostic markers for CNS neuroblastoma with FOXR2-activation.Acta Neuropathol Commun2021
33658318Kalirin-RAC controls nucleokinetic migration in ADRN-type neuroblastoma.Life Sci Alliance2021
34951766[Current diagnostic methods in molecular classification of brain tumors at the Burdenko Neurosurgical Center].Zh Vopr Neirokhir Im N N Burdenko2021
34409497Subgroup and subtype-specific outcomes in adult medulloblastoma.Acta Neuropathol2021
34446581Developmental and evolutionary dynamics of cis-regulatory elements in mouse cerebellar cells.Science2021
34046693Targeting fibroblast growth factor receptors to combat aggressive ependymoma.Acta Neuropathol2021
34077956Therapeutic implications of improved molecular diagnostics for rare CNS embryonal tumor entities: results of an international, retrospective study.Neuro Oncol2021
34162555Notch1 switches progenitor competence in inducing medulloblastoma.Sci Adv2021
34355256Recurrent fusions in PLAGL1 define a distinct subset of pediatric-type supratentorial neuroepithelial tumors.Acta Neuropathol2021
33233777Identification of VRK1 as a New Neuroblastoma Tumor Progression Marker Regulating Cell Proliferation.Cancers (Basel)2020
31781912Transcriptional profiling of medulloblastoma with extensive nodularity (MBEN) reveals two clinically relevant tumor subsets with VSNL1 as potent prognostic marker.Acta Neuropathol2020
31030238Molecular progression of SHH-activated medulloblastomas.Acta Neuropathol2019
31813451Probing Medulloblastoma Initiation at the Single-Cell Level.Trends Cancer2019
31414211MYCN amplification drives an aggressive form of spinal ependymoma.Acta Neuropathol2019
31477715YAP1 subgroup supratentorial ependymoma requires TEAD and nuclear factor I-mediated transcriptional programmes for tumorigenesis.Nat Commun2019
30862721<i>MYC</i> Drives Group 3 Medulloblastoma through Transformation of Sox2<sup>+</sup> Astrocyte Progenitor Cells.Cancer Res2019
30704404InTAD: chromosome conformation guided analysis of enhancer target genes.BMC Bioinformatics2019
30826918Desmoplastic/nodular medulloblastomas (DNMB) and medulloblastomas with extensive nodularity (MBEN) disclose similar epigenetic signatures but different transcriptional profiles.Acta Neuropathol2019
29258295Therapeutic targeting of ependymoma as informed by oncogenic enhancer profiling.Nature2018
30205043Aberrant ERBB4-SRC Signaling as a Hallmark of Group 4 Medulloblastoma Revealed by Integrative Phosphoproteomic Profiling.Cancer Cell2018
30523111A mechanistic classification of clinical phenotypes in neuroblastoma.Science2018
28314689DNA methylation-based classification and grading system for meningioma: a multicentre, retrospective analysis.Lancet Oncol2017
26914510Genetic characterization of an adapted pandemic 2009 H1N1 influenza virus that reveals improved replication rates in human lung epithelial cells.Virology2016
26428292Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data.Bioinformatics2016
27907167InFusion: Advancing Discovery of Fusion Genes and Chimeric Transcripts from Deep RNA-Sequencing Data.PLoS One2016
22368248Unipro UGENE: a unified bioinformatics toolkit.Bioinformatics2012
22914218Qualimap: evaluating next-generation sequencing alignment data.Bioinformatics2012
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Collaborators

Stefan M Pfister
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 25
Marcel Kool
Hopp Children's Cancer Center (KiTZ)
Co-authored papers 22
Andrey Korshunov
Institute of Pathology, University Hospital Heidelberg
Co-authored papers 17
David T W Jones
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 15
Andreas von Deimling
Co-authored papers 15
Felix Sahm
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 14
Marina Ryzhova
N.N. Burdenko Neurosurgical Institute
Co-authored papers 12
Kristian W Pajtler
Hopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg University
Co-authored papers 9
Lukas Chavez
University of California San Diego
Co-authored papers 7
Martin Sill
Co-authored papers 5
Michael D Taylor
The Hospital for Sick Children
Co-authored papers 5
David Capper
Charite University Medicine Berlin
Co-authored papers 5
Daisuke Kawauchi
University of California-San Diego
Co-authored papers 5
Vijay Ramaswamy
Hospital for Sick Children
Co-authored papers 5
Till Milde
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 4
Peter Lichter
German Cancer Research Center (DKFZ)
Co-authored papers 4
Dominik Sturm
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 4
Christine Haberler
Co-authored papers 4
Frank Westermann
Co-authored papers 4
Ulrich Sch??ller
University Medical Center Hamburg-Eppendorf
Co-authored papers 3
Guido Reifenberger
Heinrich Heine University
Co-authored papers 3
Johannes Gojo
Co-authored papers 3
Jan Koster
Amsterdam University Medical Centers location AMC
Co-authored papers 3
David W Ellison
St. Jude Children's Research Hospital
Co-authored papers 3
Christel Herold-Mende
Co-authored papers 3
Charles G Eberhart
Wilmer Eye Institute, Johns Hopkins Medical Institutions
Co-authored papers 3
Irene Slavc
Co-authored papers 3
Sebastian Brandner
UCL Queen Square Institute of Neurology
Co-authored papers 3
Stefan Rutkowski
University Medical Center Hamburg-Eppendorf
Co-authored papers 3
Thomas F Meyer
Max Planck Institute for Infection Biology
Co-authored papers 3
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