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Author Details

Clement Jonquet
University of Montpellier, CNRS
2009
17
9
PMIDPaper TitleJournal TitlePublished Year
33737205French FastContext: A publicly accessible system for detecting negation, temporality and experiencer in French clinical notes.J Biomed Inform2021
30999867PGxO and PGxLOD: a reconciliation of pharmacogenomic knowledge of various provenances, enabling further comparison.BMC Bioinformatics2019
30500839Agronomic Linked Data (AgroLD): A knowledge-based system to enable integrative biology in agronomy.PLoS One2018
30239679AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture.Database (Oxford)2018
29935347A novel framework for biomedical entity sense induction.J Biomed Inform2018
29846492Enhanced functionalities for annotating and indexing clinical text with the NCBO Annotator.Bioinformatics2018
30400805SIFR annotator: ontology-based semantic annotation of French biomedical text and clinical notes.BMC Bioinformatics2018
28592275NCBO Ontology Recommender 2.0: an enhanced approach for biomedical ontology recommendation.J Biomed Semantics2017
25160340An approach to compare bio-ontologies portals.Stud Health Technol Inform2014
21918645NCBO Resource Index: Ontology-Based Search and Mining of Biomedical Resources.Web Semant2011
20626921Building a biomedical ontology recommender web service.J Biomed Semantics2010
21347046The Lexicon Builder Web service: Building Custom Lexicons from two hundred Biomedical Ontologies.AMIA Annu Symp Proc2010
20505005A UIMA wrapper for the NCBO annotator.Bioinformatics2010
19208184Ontology-driven indexing of public datasets for translational bioinformatics.BMC Bioinformatics2009
19483092BioPortal: ontologies and integrated data resources at the click of a mouse.Nucleic Acids Res2009
19761568Comparison of concept recognizers for building the Open Biomedical Annotator.BMC Bioinformatics2009
21347171The open biomedical annotator.Summit Transl Bioinform2009
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Collaborators

Nigam H Shah
Stanford University
Co-authored papers 8
Mark A Musen
Stanford Center for Biomedical Informatics Research, Stanford University
Co-authored papers 8
Daniel L Rubin
Stanford University.
Co-authored papers 2
Natalya F Noy
Stanford Center for Biomedical Informatics Research, Stanford University
Co-authored papers 2
Pierre Larmande
University Montpellier
Co-authored papers 2
Nic Herndon
East Carolina University
Co-authored papers 1
Fiona M McCarthy
University of Arizona
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Deepak R Unni
Lawrence Berkeley National Laboratory
Co-authored papers 1
Atul J Butte
Bakar Computational Health Sciences Institute, University of California san francisco
Co-authored papers 1
Lisa C Harper
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Jason Williams
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Lawrence E Hunter
University of Colorado School of Medicine
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Zhi-Liang Hu
Iowa State University
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David Grant
USDA-ARS Corn Insects and Crop Genetics Research Unit
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Rex T Nelson
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Stephen P Ficklin
Washington State University
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Jodi L Humann
Washington State University
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Taner Z Sen
USDA, Crop Improvement Genetics Research Unit, Western Regional Research Center
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Laurel Cooper
Oregon State University
Co-authored papers 1
Marcela K Tello-Ruiz
State University of New York at Old Westbury
Co-authored papers 1
Carson M Andorf
USDA-ARS, Corn Insects and Crop Genetics Research Unit
Co-authored papers 1
Andrew D Farmer
National Center for Genome Resources
Co-authored papers 1
Daureen Nesdill
University of Utah
Co-authored papers 1
Victor Unda
Washington State University
Co-authored papers 1
William A Baumgartner
The Academy at Johns Hopkins
Co-authored papers 1
Bradford Condon
University of Tennessee
Co-authored papers 1
Rong Chen
Co-authored papers 1
Karin Verspoor
National Centre for Infections in Cancer, 5Peter MacCallum Cancer Centre
Co-authored papers 1
Margaret-Anne Storey
University of Victoria
Co-authored papers 1
Michael Dorf
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