Author details

Full Name

Stefan Wuchty

Affiliation

University of Miami

ORCID

Career Start Year

1999

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
34248238	The Relationship Between Social Media Use and Beliefs in Conspiracy Theories and Misinformation.	Polit Behav	2023
37546804	MicroRNA-Mediated Obstruction of Stem-loop Alternative Splicing (MIMOSAS): a global mechanism for the regulation of alternative splicing.	Res Sq	2023
37425843	MicroRNA-Mediated Obstruction of Stem-loop Alternative Splicing (MIMOSAS): a global mechanism for the regulation of alternative splicing.	bioRxiv	2023
37221359	On modeling the correlates of conspiracy thinking.	Sci Rep	2023
37295433	Minor intron splicing is critical for survival of lethal prostate cancer.	Mol Cell	2023
36919205	Deep learning-assisted prediction of protein-protein interactions in Arabidopsis thaliana.	Plant J	2023
36682013	SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network.	Brief Bioinform	2023
36755019	Parallelized multidimensional analytic framework applied to mammary epithelial cells uncovers regulatory principles in EMT.	Nat Commun	2023
35241702	Promoter/enhancer-based controllability of regulatory networks.	Sci Rep	2022
35495666	Deep Learning-Powered Prediction of Human-Virus Protein-Protein Interactions.	Front Microbiol	2022
36522383	The psychological and political correlates of conspiracy theory beliefs.	Sci Rep	2022
33417854	Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2.	Mol Cell	2021
33515030	HVIDB: a comprehensive database for human-virus protein-protein interactions.	Brief Bioinform	2021
34188182	Transcriptome-wide association study of post-trauma symptom trajectories identified GRIN3B as a potential biomarker for PTSD development.	Neuropsychopharmacology	2021
34273146	Transfer learning via multi-scale convolutional neural layers for human-virus protein-protein interaction prediction.	Bioinformatics	2021
33963278	Integration of peripheral transcriptomics, genomics, and interactomics following trauma identifies causal genes for symptoms of post-traumatic stress and major depression.	Mol Psychiatry	2021
30031213	Protein-protein interactions of human viruses.	Semin Cell Dev Biol	2020
32076007	Controllability analysis of molecular pathways points to proteins that control the entire interaction network.	Sci Rep	2020
33259812	Actionable Cytopathogenic Host Responses of Human Alveolar Type 2 Cells to SARS-CoV-2.	Mol Cell	2020
32613890	Computational Identification of Kinases That Control Axon Growth in Mouse.	SLAS Discov	2020
32499650	The online competition between pro- and anti-vaccination views.	Nature	2020
30850642	Collective influencers in protein interaction networks.	Sci Rep	2019
31969974	Prediction of human-virus protein-protein interactions through a sequence embedding-based machine learning method.	Comput Struct Biotechnol J	2019
31827121	The green peach aphid gut contains host plant microRNAs identified by comprehensive annotation of Brassica oleracea small RNA data.	Sci Rep	2019
31351464	Promoter conservation in HDACs points to functional implications.	BMC Genomics	2019
31435010	Hidden resilience and adaptive dynamics of the global online hate ecology.	Nature	2019
31591560	Epigenomic signatures underpin the axonal regenerative ability of dorsal root ganglia sensory neurons.	Nat Neurosci	2019
30737464	A network biology approach to unraveling inherited axonopathies.	Sci Rep	2019
29271121	microRNA regulation in an ancient obligate endosymbiosis.	Mol Ecol	2018
29414760	Proteome Data Improves Protein Function Prediction in the Interactome of <i>Helicobacter pylori</i>.	Mol Cell Proteomics	2018
29795705	Beyond degree and betweenness centrality: Alternative topological measures to predict viral targets.	PLoS One	2018
29176613	Global landscape of cell envelope protein complexes in Escherichia coli.	Nat Biotechnol	2018
28744484	The Protein Interactome of <i>Streptococcus pneumoniae</i> and Bacterial Meta-interactomes Improve Function Predictions.	mSystems	2017
28298180	Bacterial protein meta-interactomes predict cross-species interactions and protein function.	BMC Bioinformatics	2017
28397356	Links between critical proteins drive the controllability of protein interaction networks.	Proteomics	2017
28319831	Structure-based prediction of host-pathogen protein interactions.	Curr Opin Struct Biol	2017
27103053	The interactome of Streptococcus pneumoniae and its bacteriophages show highly specific patterns of interactions among bacteria and their phages.	Sci Rep	2016
27822522	Local Action with Global Impact: Highly Similar Infection Patterns of Human Viruses and Bacteriophages.	mSystems	2016
27386564	Women's connectivity in extreme networks.	Sci Adv	2016
27489291	Cell-free Determination of Binary Complexes That Comprise Extended Protein-Protein Interaction Networks of Yersinia pestis.	Mol Cell Proteomics	2016
27313046	New online ecology of adversarial aggregates: ISIS and beyond.	Science	2016
25880655	Essentiality and centrality in protein interaction networks revisited.	BMC Bioinformatics	2015
24627523	A second-generation protein-protein interaction network of Helicobacter pylori.	Mol Cell Proteomics	2014
25431098	Protein-protein Interaction Networks of E. coli and S. cerevisiae are similar.	Sci Rep	2014
25519916	The EHEC-host interactome reveals novel targets for the translocated intimin receptor.	Sci Rep	2014
24841368	Identifying novel cell cycle proteins in Apicomplexa parasites through co-expression decision analysis.	PLoS One	2014
24778220	Controllability in protein interaction networks.	Proc Natl Acad Sci U S A	2014
24561554	The binary protein-protein interaction landscape of Escherichia coli.	Nat Biotechnol	2014
23358700	Important miRs of pathways in different tumor types.	PLoS Comput Biol	2013
24510594	Computational large-scale mapping of protein-protein interactions using structural complexes.	Curr Protoc Protein Sci	2013

1 - 50 of 91

Ariel Feiglin

Bar-Ilan University

Career Start Year 2012

Number of shared co-authors 0

Vera Pancaldi

Universite de Toulouse, Inserm, CNRS, Universite Toulouse III-Paul Sabatier

Career Start Year 2009

Number of shared co-authors 0

Janusz Dutkowski

Data4Cure Inc.

Career Start Year 2007

Number of shared co-authors 0

Aleksandar Stojmirovic

Janssen Research & Development LLC

Career Start Year 2007

Number of shared co-authors 0

Silpa Suthram

Stanford Center for Biomedical Informatics Research, Stanford University

Career Start Year 2005

Number of shared co-authors 3

Alberto Paccanaro

University of London

Career Start Year 2005

Number of shared co-authors 9

Natali Gulbahce

Complete Genomics Inc.

Career Start Year 2004

Number of shared co-authors 1

Tanusya M Murali

Yong Loo Lin School of Medicine, National University of Singapore

Career Start Year 2003

Number of shared co-authors 0

Dmitry Korkin

Worcester Polytechnic Institute

Career Start Year 2002

Number of shared co-authors 2

Roland Krause

University of Luxembourg

Career Start Year 2002

Number of shared co-authors 2

Madan Mohan Babu

St. Jude Children's Research Hospital

Career Start Year 2002

Number of shared co-authors 3

Haiyuan Yu

Weill Institute for Cell and Molecular Biology, Cornell University

Career Start Year 2001

Number of shared co-authors 16

Marcio Luis Acencio

Norwegian University of Science and Technology

Career Start Year 2000

Number of shared co-authors 0

Frank Emmert-Streib

Tampere University

Career Start Year 2000

Number of shared co-authors 0

Roded Sharan

Tel Aviv University

Career Start Year 2000

Number of shared co-authors 1

Gary D Bader

University of Toronto

Career Start Year 2000

Number of shared co-authors 21

Igor Jurisica

Schroeder Arthritis Institute

Career Start Year 1998

Number of shared co-authors 8

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 2

Sarah A Teichmann

Wellcome Sanger Institute

Career Start Year 1996

Number of shared co-authors 1

Yu Xia

College of Information Engineering, Zhejiang University of Technology

Career Start Year 1996

Number of shared co-authors 4

Trey Ideker (CM4AI)

University of California San Diego

Career Start Year 1996

Number of shared co-authors 6

Ron Shamir

Tel Aviv University

Career Start Year 1995

Number of shared co-authors 0

Ioannis Xenarios

University of Lausanne

Career Start Year 1994

Number of shared co-authors 5

Bonnie Berger

Massachusetts Institute of Technology

Career Start Year 1994

Number of shared co-authors 4

Jason E McDermott

Pacific Northwest National Laboratory

Career Start Year 1993

Number of shared co-authors 0

Simon Kasif

Boston University

Career Start Year 1993

Number of shared co-authors 1

Edward M Marcotte

University of Texas

Career Start Year 1993

Number of shared co-authors 7

Joel S Bader

Johns Hopkins University

Career Start Year 1993

Number of shared co-authors 5

Marc Vidal

Blavatnik Institute, Harvard Medical School

Career Start Year 1989

Number of shared co-authors 7

Alfonso Valencia

Josep Carreras Leukaemia Research Institute (IJC)

Career Start Year 1986

Number of shared co-authors 3

row(s) 1 - 30 of 30

Peter Uetz

Center for the Study of Biological Complexity, Virginia Commonwealth University

Co-authored papers 12

Seesandra V Rajagopala

Vanderbilt University Medical Center

Co-authored papers 5

Sadhna Phanse

University of Regina

Co-authored papers 5

Roman Hauser

SSSSGerman Cancer Research Center

Co-authored papers 5

Andrew Emili

Boston University School of Medicine, Boston University

Co-authored papers 5

Patrick Aloy

Institucio Catalana de Recerca i Estudis Avancats (ICREA)

Co-authored papers 4

Howard A Fine

Meyer Cancer Center

Co-authored papers 4

John Harry Caufield

American Heart Association, American Society for Microbiology, International Society for Computational Biology, Lawrence Berkeley National Laboratory, University of California Los Angeles, University of Delaware, Virginia Commonwealth University

Co-authored papers 3

Dima Kozakov

Stony Brook University

Co-authored papers 3

Dzmitry Padhorny

Co-authored papers 3

Arnaud Ceol

European Institute of Oncology IRCCS

Co-authored papers 3

Moore Benjamin Shoemaker

Vanderbilt University Medical Center

Co-authored papers 3