Skip to Main Content

Author Details

Erik Verschueren
University of California San Francisco
1997
48
26
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36496144MSstatsPTM: Statistical Relative Quantification of Posttranslational Modifications in Bottom-Up Mass Spectrometry-Based Proteomics.Mol Cell Proteomics2023
37047232NUSAP1 Binds ILF2 to Modulate R-Loop Accumulation and DNA Damage in Prostate Cancer.Int J Mol Sci2023
36640924TEAD Proteins Associate With DNA Repair Proteins to Facilitate Cellular Recovery From DNA Damage.Mol Cell Proteomics2023
33297860Fi-score: a novel approach to characterise protein topology and aid in drug discovery studies.J Biomol Struct Dyn2022
35266954The E3 ligase TRIM1 ubiquitinates LRRK2 and controls its localization, degradation, and toxicity.J Cell Biol2022
35139374CRAF dimerization with ARAF regulates KRAS-driven tumor growth.Cell Rep2022
34085925Multiplexed proteomics of autophagy-deficient murine macrophages reveals enhanced antimicrobial immunity via the oxidative stress response.Elife2021
33828080Genetic inactivation of RIP1 kinase activity in rats protects against ischemic brain injury.Cell Death Dis2021
33754705Serum Lysophosphatidic Acid Measurement by Liquid Chromatography-Mass Spectrometry in COPD Patients.J Am Soc Mass Spectrom2021
34879110The neutrophil protein CD177 is a novel PDPN receptor that regulates human cancer-associated fibroblast physiology.PLoS One2021
34556083Lysophosphatidic acid species are associated with exacerbation in chronic obstructive pulmonary disease.BMC Pulm Med2021
34260887Homeostatic functions of monocytes and interstitial lung macrophages are regulated via collagen domain-binding receptor LAIR1.Immunity2021
32142684Dynamic Regulation of Mitochondrial Import by the Ubiquitin System.Mol Cell2020
32084337A Quantitative Genetic Interaction Map of HIV Infection.Mol Cell2020
32015554Global site-specific neddylation profiling reveals that NEDDylated cofilin regulates actin dynamics.Nat Struct Mol Biol2020
32103165Publisher Correction: Global site-specific neddylation profiling reveals that NEDDylated cofilin regulates actin dynamics.Nat Struct Mol Biol2020
31973889PIKES Analysis Reveals Response to Degraders and Key Regulatory Mechanisms of the CRL4 Network.Mol Cell2020
32929271MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets.Nat Methods2020
32589946The Immunoglobulin Superfamily Receptome Defines Cancer-Relevant Networks Associated with Clinical Outcome.Cell2020
32788728Structure of the essential inner membrane lipopolysaccharide-PbgA complex.Nature2020
30699358PPARγ Interaction with UBR5/ATMIN Promotes DNA Repair to Maintain Endothelial Homeostasis.Cell Rep2019
31527793Enterovirus pathogenesis requires the host methyltransferase SETD3.Nat Microbiol2019
30814119Dynamic BAF chromatin remodeling complex subunit inclusion promotes temporally distinct gene expression programs in cardiogenesis.Development2019
30951545The Gag protein PEG10 binds to RNA and regulates trophoblast stem cell lineage specification.PLoS One2019
30948477PTCD1 Is Required for Mitochondrial Oxidative-Phosphorylation: Possible Genetic Association with Alzheimer's Disease.J Neurosci2019
29358708Selective autophagy of the adaptor TRIF regulates innate inflammatory signaling.Nat Immunol2018
29950720OTULIN limits cell death and inflammation by deubiquitinating LUBAC.Nature2018
28801661Statistical characterization of therapeutic protein modifications.Sci Rep2017
27253329Non-degradative Ubiquitination of Protein Kinases.PLoS Comput Biol2016
27978436The mTOR Complex Controls HIV Latency.Cell Host Microbe2016
25544563Global mapping of herpesvirus-host protein complexes reveals a transcription strategy for late genes.Mol Cell2015
26651948Meta- and Orthogonal Integration of Influenza "OMICs" Data Defines a Role for UBR4 in Virus Budding.Cell Host Microbe2015
26118995Global Mapping of the Inc-Human Interactome Reveals that Retromer Restricts Chlamydia Infection.Cell Host Microbe2015
26068101Evolution of the SH3 Domain Specificity Landscape in Yeasts.PLoS One2015
25875391Pharmacological dimerization and activation of the exchange factor eIF2B antagonizes the integrated stress response.Elife2015
25616068A combined proteomics/genomics approach links hepatitis C virus infection with nonsense-mediated mRNA decay.Mol Cell2015
25754993Scoring Large-Scale Affinity Purification Mass Spectrometry Datasets with MiST.Curr Protoc Bioinformatics2015
25275790Affinity purification-mass spectrometry and network analysis to understand protein-protein interactions.Nat Protoc2014
23583037Protein-peptide complex prediction through fragment interaction patterns.Structure2013
24345680Integration of protein abundance and structure data reveals competition in the ErbB signaling network.Sci Signal2013
20972210BriX: a database of protein building blocks for structural analysis, modeling and design.Nucleic Acids Res2011
21525870The multiple-specificity landscape of modular peptide recognition domains.Mol Syst Biol2011
21684149Protein design with fragment databases.Curr Opin Struct Biol2011
21316780Computational design of peptide ligands.Trends Biotechnol2011
21074054Enhanced SnapShot: Macromolecular machines.Cell2010
19679090Protein-peptide interactions adopt the same structural motifs as monomeric protein folds.Structure2009
9609968Influence of stearylamine and dicetylphosphate on the physical properties of submicron O/W emulsions.J Pharm Belg1998
9281896The influence of additives on physical properties of emulsions prepared using lecithins and non-ionic surfactants.J Pharm Belg1997
  • 1 - 48 of 48

Recommended Authors

Jacob M Wozniak
The Scripps Research Institute
Career Start Year 2017
Number of shared co-authors 6
Matthew J O'Meara
University of Michigan ann arbor
Career Start Year 2013
Number of shared co-authors 14
Dennis Goldfarb
Washington University School of Medicine
Career Start Year 2012
Number of shared co-authors 0
Sadhna Phanse
University of Regina
Career Start Year 2008
Number of shared co-authors 4
Kathy H Li
West China Hospital, Sichuan University
Career Start Year 2005
Number of shared co-authors 18
Abdullah Kahraman
University of Zurich
Career Start Year 2005
Number of shared co-authors 2
Erik J Soderblom
Center for Genomic and Computational Biology, Duke University
Career Start Year 2003
Number of shared co-authors 0
Alan M Sandercock
MedImmune Ltd.
Career Start Year 2001
Number of shared co-authors 2
Jeroen A A Demmers
Erasmus Medical Center
Career Start Year 2000
Number of shared co-authors 1
Oliver Kohlbacher
Max Planck Institute for Developmental Biology
Career Start Year 2000
Number of shared co-authors 5
Parag Mallick
Stanford University
Career Start Year 2000
Number of shared co-authors 6
Feixia Chu
University of New Hampshire
Career Start Year 1999
Number of shared co-authors 3
Daron M Standley
Osaka university
Career Start Year 1998
Number of shared co-authors 2
Juri Rappsilber
Institute for Biotechnology, Technical University Berlin
Career Start Year 1998
Number of shared co-authors 3
Patrick Aloy
Institucio Catalana de Recerca i Estudis Avancats (ICREA)
Career Start Year 1997
Number of shared co-authors 3
Damarys Loew
Institut Curie, PSL Research University
Career Start Year 1996
Number of shared co-authors 0
Ioannis Xenarios
University of Lausanne
Career Start Year 1994
Number of shared co-authors 5
Anne-Claude Gingras
Lunenfeld-Tanenbaum Research Institute
Career Start Year 1994
Number of shared co-authors 5
Edward M Marcotte
University of Texas
Career Start Year 1993
Number of shared co-authors 1
Jason E McDermott
Pacific Northwest National Laboratory
Career Start Year 1993
Number of shared co-authors 1
Zhiping Weng
University of Massachusetts Medical School
Career Start Year 1992
Number of shared co-authors 3
Robert B Russell
Heidelberg University
Career Start Year 1991
Number of shared co-authors 1
Andrew Emili
Boston University School of Medicine, Boston University
Career Start Year 1991
Number of shared co-authors 9
Albert J R Heck
Utrecht University
Career Start Year 1991
Number of shared co-authors 8
Shankar Subramaniam
University of California
Career Start Year 1989
Number of shared co-authors 3
David Feny??
Institute for Systems Genetics, NYU Grossman School of Medicine
Career Start Year 1989
Number of shared co-authors 2
Sirano Dhe-Paganon
Dana-Farber Cancer Institute
Career Start Year 1989
Number of shared co-authors 4
Michal Linial
Institute of Life Sciences, The Hebrew University of Jerusalem
Career Start Year 1986
Number of shared co-authors 0
Gianni Cesareni
University of Rome 'Tor Vergata'
Career Start Year 1976
Number of shared co-authors 3
John R Yates
TheScripps Research Institute
Career Start Year 1960
Number of shared co-authors 9

Collaborators

Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 12
Jeffrey R Johnson
Gladstone Institutes
Co-authored papers 10
Yasin Senbabaoglu
Co-authored papers 5
Gwendolyn M Jang
Gladstone Institute of Data Science and Biotechnology, J. David Gladstone Institutes
Co-authored papers 5
John Von Dollen
University of California San Francisco
Co-authored papers 5
Tasha Johnson
Quantitative Biosciences Institute (QBI), University of California san francisco
Co-authored papers 4
Michael Shales
University of California, USA Quantitative Biosciences Institute (QBI) san francisco
Co-authored papers 4
Olga Vitek
Khoury College of Computer Sciences, Northeastern University
Co-authored papers 4
Wendy Sandoval
Genentech Inc.
Co-authored papers 3
Billy W Newton
University of California San Francisco
Co-authored papers 3
Shannon J Turley
Co-authored papers 3
Wolfgang Wurst
Institute of Developmental Genetics, German Research Center for Environmental Health
Co-authored papers 2
Carrie M Rosenberger
Genentech Inc.
Co-authored papers 2
Jonathan S Weissman
Whitehead Institute for Biomedical Research
Co-authored papers 2
Andrew Birnberg
Co-authored papers 2
Melanie Ott
Gladstone Institute of Virology
Co-authored papers 2
Martin Kampmann
Institute for Neurodegenerative Diseases, University of California san francisco
Co-authored papers 2
Peter Cimermancic
Verily Life Sciences LLC
Co-authored papers 2
Danielle L Swaney
J. David Gladstone Institutes
Co-authored papers 2
Almer M van der Sloot
Institute for Research in Immunology and Cancer, Universite de Montreal
Co-authored papers 2
Natali Gulbahce
Complete Genomics Inc.
Co-authored papers 2
Ruth H??ttenhain
Quantitative Biosciences Institute (QBI), University of California san francisco
Co-authored papers 2
Stefanie J??ger
Institute of Molecular Biosciences, Goethe University Frankfurt
Co-authored papers 2
Jiewei Xu
Quantitative Biosciences Institute (QBI), University of California san francisco
Co-authored papers 2
Julie Horner
Co-authored papers 2
Hyung W Lim
Gladstone Institute of Virology and Immunology
Co-authored papers 1
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 1
Scott A Oakes
Pritzker School of Medicine, University of Chicago
Co-authored papers 1
Kerri A Ball
Skidmore College
Co-authored papers 1
Lukas Reiter
Co-authored papers 1
Release 1.2