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Author Details

William H Hildebrand
University of Oklahoma Health Sciences Center
1990
157
46
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36798440A Kmer-based paired-end read <i>de novo</i> assembler and genotyper for canine MHC class I genotyping.iScience2023
37085710Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome.Commun Biol2023
35303241Major histocompatibility complex class I molecule expression by pancreatic cancer cells is regulated by activation and inhibition of the epidermal growth factor receptor.Immunol Res2022
35808806Single-cell RNA sequencing reveals localized tumour ablation and intratumoural immunostimulant delivery potentiate T cell mediated tumour killing.Clin Transl Med2022
36581641Deaza-modification of MR1 ligands modulates recognition by MR1-restricted T cells.Sci Rep2022
36314681Subcellular location of source proteins improves prediction of neoantigens for immunotherapy.EMBO J2022
36253002Localized ablative immunotherapy drives de novo CD8<sup>+</sup> T-cell responses to poorly immunogenic tumors.J Immunother Cancer2022
35154160Accurate MHC Motif Deconvolution of Immunopeptidomics Data Reveals a Significant Contribution of DRB3, 4 and 5 to the Total DR Immunopeptidome.Front Immunol2022
34976205Antigen presentation and interferon signatures in B cells driven by localized ablative cancer immunotherapy correlate with extended survival.Theranostics2022
33633747Alterations in the HLA-B*57:01 Immunopeptidome by Flucloxacillin and Immunogenicity of Drug-Haptenated Peptides.Front Immunol2021
32308001Improved Prediction of MHC II Antigen Presentation through Integration and Motif Deconvolution of Mass Spectrometry MHC Eluted Ligand Data.J Proteome Res2020
31879353Determinants governing T cell receptor α/β-chain pairing in repertoire formation of identical twins.Proc Natl Acad Sci U S A2020
30891032Variability in German Cockroach Extract Composition Greatly Impacts T Cell Potency in Cockroach-Allergic Donors.Front Immunol2019
32002300A pipeline for identification and validation of tumor-specific antigens in a mouse model of metastatic breast cancer.Oncoimmunology2019
31747595Defects in Antiviral T Cell Responses Inflicted by Aging-Associated miR-181a Deficiency.Cell Rep2019
31685621Immunological ignorance is an enabling feature of the oligo-clonal T cell response to melanoma neoantigens.Proc Natl Acad Sci U S A2019
31451733Precision mouse models with expanded tropism for human pathogens.Nat Biotechnol2019
29217367Response to the comments on "Direct quantitative measurement of the kinetics of HLA-specific antibody interactions with isolated HLA proteins".Hum Immunol2018
29940408Role of MAIT cells in pulmonary bacterial infection.Mol Immunol2018
30006464MR1 displays the microbial metabolome driving selective MR1-restricted T cell receptor usage.Sci Immunol2018
29755469Urinary Peptides As a Novel Source of T Cell Allergen Epitopes.Front Immunol2018
29615400NetH2pan: A Computational Tool to Guide MHC Peptide Prediction on Murine Tumors.Cancer Immunol Res2018
29356555Riboflavin Metabolism Variation among Clinical Isolates of Streptococcus pneumoniae Results in Differential Activation of Mucosal-associated Invariant T Cells.Am J Respir Cell Mol Biol2018
29097266Direct quantitative measurement of the kinetics of HLA-specific antibody interactions with isolated HLA proteins.Hum Immunol2018
27759023MR1-restricted mucosal-associated invariant T (MAIT) cells respond to mycobacterial vaccination and infection in nonhuman primates.Mucosal Immunol2017
28179428Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT.J Biol Chem2017
29107334MHC-I Genotype Restricts the Oncogenic Mutational Landscape.Cell2017
29176828T cell recognition of Mycobacterium tuberculosis peptides presented by HLA-E derived from infected human cells.PLoS One2017
28514659The Intergenic Recombinant HLA-Bâ¿¿46:01 Has a Distinctive Peptidome that Includes KIR2DL3 Ligands.Cell Rep2017
28677168Impact of HLA-DRB1 allele polymorphisms on control of HIV infection in a Peruvian MSM cohort.HLA2017
28905919Erratum: T cells from patients with Parkinson's disease recognize α-synuclein peptides.Nature2017
28636952Human Leukocyte Antigen F Presents Peptides and Regulates Immunity through Interactions with NK Cell Receptors.Immunity2017
28636593T cells from patients with Parkinson's disease recognize α-synuclein peptides.Nature2017
26783342The Length Distribution of Class I-Restricted T Cell Epitopes Is Determined by Both Peptide Supply and MHC Allele-Specific Binding Preference.J Immunol2016
27183642Immunodominant West Nile Virus T Cell Epitopes Are Fewer in Number and Fashionably Late.J Immunol2016
26719579Human Leukocyte Antigen-Presented Macrophage Migration Inhibitory Factor Is a Surface Biomarker and Potential Therapeutic Target for Ovarian Cancer.Mol Cancer Ther2016
26824387Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove.Elife2016
26869717Interaction of TAPBPR, a tapasin homolog, with MHC-I molecules promotes peptide editing.Proc Natl Acad Sci U S A2016
25715101The HLA-C*04: 01/KIR2DS4 gene combination and human leukocyte antigen alleles with high population frequency drive rate of HIV disease progression.AIDS2015
26597986Enhanced Direct Major Histocompatibility Complex Class I Self-Antigen Presentation Induced by Chlamydia Infection.Infect Immun2015
26247297Complementary IMAC enrichment methods for HLA-associated phosphopeptide identification by mass spectrometry.Nat Protoc2015
26768311Viral infection causes a shift in the self peptide repertoire presented by human MHC class I molecules.Proteomics Clin Appl2015
25837513Cancer immunotherapy. A dendritic cell vaccine increases the breadth and diversity of melanoma neoantigen-specific T cells.Science2015
23933161The Human Proteome Organization Chromosome 6 Consortium: integrating chromosome-centric and biology/disease driven strategies.J Proteomics2014
25313587HLA-B*35-PX and HLA-B*35-PY subtype differentiation does not predict observed differences in level of HIV control in a Peruvian MSM cohort.AIDS2014
25165114Direct interrogation of viral peptides presented by the class I HLA of HIV-infected T cells.J Virol2014
24816171Dengue virus-infected human dendritic cells reveal hierarchies of naturally expressed novel NS3 CD8 T cell epitopes.Clin Exp Immunol2014
24723377A novel T-cell receptor mimic defines dendritic cells that present an immunodominant West Nile virus epitope in mice.Eur J Immunol2014
24269696Profiling antibodies to class II HLA in transplant patient sera.Hum Immunol2014
24390327Human herpesvirus 7 U21 tetramerizes to associate with class I major histocompatibility complex molecules.J Virol2014
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Collaborators

Alessandro Sette
Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology
Co-authored papers 14
Saghar Kaabinejadian
Pure MHC LLC
Co-authored papers 12
Bjoern Peters
University of Washington School of Medicine
Co-authored papers 11
John Sidney
Co-authored papers 10
David I Watkins
Co-authored papers 7
David M Lewinsohn
Oregon Health and Science University
Co-authored papers 6
Todd M Allen
Co-authored papers 6
David H O'Connor
Co-authored papers 6
Bruce D Walker
Ragon Institute of Mass General
Co-authored papers 5
Steven G E Marsh
Anthony Nolan Research Institute, Royal Free Hospital
Co-authored papers 4
Ted H Hansen
Co-authored papers 4
Deborah A Lewinsohn
Oregon Health and Science University
Co-authored papers 4
Marcus Altfeld
Co-authored papers 4
Michael S Diamond
Washington University School of Medicine
Co-authored papers 3
Alana L Welm
Huntsman Cancer Institute, University of Utah
Co-authored papers 3
Ilka Hoof
LEO Pharma
Co-authored papers 3
Meghan E Cansler
Oregon Health and Science University
Co-authored papers 3
Elizabeth Trachtenberg
Children's Hospital Oakland Research Institute
Co-authored papers 3
Gwendolyn M Swarbrick
Oregon Health and Science University
Co-authored papers 3
Megan D Null
Oregon Health and Science University
Co-authored papers 3
John T Loffredo
Co-authored papers 3
Elizabeth J Phillips
Vanderbilt University Medical Center
Co-authored papers 3
Carolina Barra
Co-authored papers 3
David Sulzer
New York State Psychiatric Institute, Research Foundation for Mental Hygiene
Co-authored papers 2
Soumya G Remesh
Department of Pharmaceutical Chemistry, University of California san francisco
Co-authored papers 2
Paula J Busse
Icahn School of Medicine at Mount Sinai
Co-authored papers 2
Ann B Begovich
Cetus Corporation
Co-authored papers 2
Natarajan Kannan
University of Georgia
Co-authored papers 2
Hannah Carter
University of California San Diego
Co-authored papers 2
Bette Korber
Co-authored papers 2
Release 1.2