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Author Details

Qingrun Zhang
University of Calgary
2003
28
12
PMIDPaper TitleJournal TitlePublished Year
38001381rvTWAS: identifying gene-trait association using sequences by utilizing transcriptome-directed feature selection.Genetics2024
37459799ING1 inhibits Twist1 expression to block EMT and is antagonized by the HDAC inhibitor vorinostat.Eur J Cell Biol2023
37782668XA4C: eXplainable representation learning via Autoencoders revealing Critical genes.PLoS Comput Biol2023
37693313A multi-threaded approach to genotype pattern mining for detecting digenic disease genes.Front Genet2023
34849857Disentangling genetic feature selection and aggregation in transcriptome-wide association studies.Genetics2022
36542714Stabilized COre gene and Pathway Election uncovers pan-cancer shared pathways and a cancer-specific driver.Sci Adv2022
34322159Filtering High-Dimensional Methylation Marks With Extremely Small Sample Size: An Application to Gastric Cancer Data.Front Genet2021
34440333Genotype Pattern Mining for Pairs of Interacting Variants Underlying Digenic Traits.Genes (Basel)2021
30482799OCMA: Fast, Memory-Efficient Factorization of Prohibitively Large Relationship Matrices.G3 (Bethesda)2019
31199922Expression Profiling Reveals Involvement of WNT Pathway in the Malignant Progression of Sessile Serrated Adenomas.Am J Pathol2019
26681995An extended Tajima's D neutrality test incorporating SNP calling and imputation uncertainties.Stat Interface2015
24901472AprioriGWAS, a new pattern mining strategy for detecting genetic variants associated with disease through interaction effects.PLoS Comput Biol2014
23479353JAWAMix5: an out-of-core HDF5-based java implementation of whole-genome association studies using mixed models.Bioinformatics2013
23793030Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden.Nat Genet2013
21264334PoolHap: inferring haplotype frequencies from pooled samples by next generation sequencing.PLoS One2011
20811451Integrating common and rare genetic variation in diverse human populations.Nature2010
18824738Chromosomes 4q28.3 and 7q31.2 as new susceptibility loci for comitant strabismus.Invest Ophthalmol Vis Sci2009
19208180Detecting disease-associated genotype patterns.BMC Bioinformatics2009
18601744Combining identity by descent and association in genetic case-control studies.BMC Genet2008
18704199Comprehensive analysis of CRP, CFH Y402H and environmental risk factors on risk of neovascular age-related macular degeneration.Mol Vis2008
17450141A six-nucleotide insertion-deletion polymorphism in the CASP8 promoter is associated with susceptibility to multiple cancers.Nat Genet2007
17892576Universal primers for HBV genome DNA amplification across subtypes: a case study for designing more effective viral primers.Virol J2007
17943131Genome-wide detection and characterization of positive selection in human populations.Nature2007
17974018Retraction. Universal primers for HBV genome DNA amplification across subtypes: a case study for designing more effective viral primers.Virol J2007
17943122A second generation human haplotype map of over 3.1 million SNPs.Nature2007
17145822Haplotypes in matrix metalloproteinase gene cluster on chromosome 11q22 contribute to the risk of lung cancer development and progression.Clin Cancer Res2006
15626340A genome sequence of novel SARS-CoV isolates: the genotype, GD-Ins29, leads to a hypothesis of viral transmission in South China.Genomics Proteomics Bioinformatics2003
15626341The structural characterization and antigenicity of the S protein of SARS-CoV.Genomics Proteomics Bioinformatics2003
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Collaborators

Changqing Zeng
Institute of Biomedical Sciences, Henan Academy of Sciences
Co-authored papers 8
Huanming Yang
Experimental Research Center, China Academy of Chinese Medical Sciences
Co-authored papers 4
Yang Gao
Capital University of Physical Education and Sports
Co-authored papers 4
Jian Wang
Institute of Medical Research, Northwestern Polytechnical University
Co-authored papers 4
Jun Yu
Beijing Institute of Genomics, Chinese Academy of Sciences
Co-authored papers 3
Siqi Liu
The Second Hospital, Jilin University
Co-authored papers 3
Lisa D Brooks
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 3
Ichiro Matsuda
Health Sciences University of Hokkaido
Co-authored papers 3
Stephen F Schaffner
Broad Institute of Massachusetts Institute of Technology (MIT) and Harvard
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Sarah E Hunt
European Bioinformatics Institute
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Jun Zhou
Shenyang Fourth People's Hospital
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Rhian Gwilliam
The Wellcome Trust Sanger Institute
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Morris W Foster
Department of Political Science Duke University 279 Gross Hall
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Donna M Muzny
Baylor College of Medicine
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Paul I W de Bakker
Vertex Pharmaceuticals
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Huy Nguyen
The University of Danang-University of Science and Technology
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Fuli Yu
East China University of Science and Technology
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Melissa Parkin
The Broad Institute of MIT and Harvard
Co-authored papers 3
Vivian Ota Wang
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 3
Pamela Whittaker
King Edward Memorial Hospital
Co-authored papers 3
Patricia A Marshall
Case Western Reserve University
Co-authored papers 3
Mark J Daly
Massachusetts General Hospital
Co-authored papers 3
Alkes L Price
Broad Institute of MIT and Harvard
Co-authored papers 3
Charles N Rotimi
Center for Research on Genomics and Global Health, National Institutes of Health
Co-authored papers 3
Stacey Gabriel
Broad Institute of MIT and Harvard
Co-authored papers 3
Gil McVean
Big Data Institute, University of Oxford
Co-authored papers 3
Magnus Nordborg
Co-authored papers 3
Charmaine D M Royal
Duke University
Co-authored papers 3
Emmanouil T Dermitzakis
University of Geneva
Co-authored papers 3
Panos Deloukas
William Harvey Research Institute, Queen Mary University of London
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