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Author Details

Timothy Ravasi
Okinawa Institute of Science and Technology Graduate University
2002
129
43
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36801344Clownfish larvae exhibit faster growth, higher metabolic rates and altered gene expression under future ocean warming.Sci Total Environ2023
37928172Anemonefishes: A model system for evolutionary genomics.F1000Res2023
37957664Neuromolecular responses in disrupted mutualistic cleaning interactions under future environmental conditions.BMC Biol2023
37125023Research priorities for the sustainability of coral-rich western Pacific seascapes.Reg Environ Change2023
36626199The chromosome-scale genome assembly of the yellowtail clownfish Amphiprion clarkii provides insights into the melanic pigmentation of anemonefish.G3 (Bethesda)2023
36801344Clownfish larvae exhibit faster growth, higher metabolic rates and altered gene expression under future ocean warming.Sci Total Environ2023
37492147Brain transcriptome of gobies inhabiting natural CO<sub>2</sub> seeps reveal acclimation strategies to long-term acidification.Evol Appl2023
37957664Neuromolecular responses in disrupted mutualistic cleaning interactions under future environmental conditions.BMC Biol2023
37928172Anemonefishes: A model system for evolutionary genomics.F1000Res2023
37492147Brain transcriptome of gobies inhabiting natural CO<sub>2</sub> seeps reveal acclimation strategies to long-term acidification.Evol Appl2023
37125023Research priorities for the sustainability of coral-rich western Pacific seascapes.Reg Environ Change2023
36626199The chromosome-scale genome assembly of the yellowtail clownfish Amphiprion clarkii provides insights into the melanic pigmentation of anemonefish.G3 (Bethesda)2023
35233246Plasticity to ocean warming is influenced by transgenerational, reproductive, and developmental exposure in a coral reef fish.Evol Appl2022
35589869Neuro-molecular characterization of fish cleaning interactions.Sci Rep2022
35866024Parents exposed to warming produce offspring lower in weight and condition.Ecol Evol2022
35353192A chromosome-scale genome assembly of the false clownfish, Amphiprion ocellaris.G3 (Bethesda)2022
35238117Rapid evolution fuels transcriptional plasticity to ocean acidification.Glob Chang Biol2022
35233246Plasticity to ocean warming is influenced by transgenerational, reproductive, and developmental exposure in a coral reef fish.Evol Appl2022
35342554The alternative splicing landscape of a coral reef fish during a marine heatwave.Ecol Evol2022
35353192A chromosome-scale genome assembly of the false clownfish, Amphiprion ocellaris.G3 (Bethesda)2022
35342554The alternative splicing landscape of a coral reef fish during a marine heatwave.Ecol Evol2022
35589869Neuro-molecular characterization of fish cleaning interactions.Sci Rep2022
35866024Parents exposed to warming produce offspring lower in weight and condition.Ecol Evol2022
35238117Rapid evolution fuels transcriptional plasticity to ocean acidification.Glob Chang Biol2022
34402113Diel pCO<sub>2</sub> fluctuations alter the molecular response of coral reef fishes to ocean acidification conditions.Mol Ecol2021
33897826Sex- and time-specific parental effects of warming on reproduction and offspring quality in a coral reef fish.Evol Appl2021
34518569The time course of molecular acclimation to seawater in a euryhaline fish.Sci Rep2021
34402113Diel pCO<sub>2</sub> fluctuations alter the molecular response of coral reef fishes to ocean acidification conditions.Mol Ecol2021
34875194Molecular basis of parental contributions to the behavioural tolerance of elevated pCO<sub>2</sub> in a coral reef fish.Proc Biol Sci2021
33897826Sex- and time-specific parental effects of warming on reproduction and offspring quality in a coral reef fish.Evol Appl2021
34875194Molecular basis of parental contributions to the behavioural tolerance of elevated pCO<sub>2</sub> in a coral reef fish.Proc Biol Sci2021
34518569The time course of molecular acclimation to seawater in a euryhaline fish.Sci Rep2021
32206711Species-specific molecular responses of wild coral reef fishes during a marine heatwave.Sci Adv2020
32206711Species-specific molecular responses of wild coral reef fishes during a marine heatwave.Sci Adv2020
33087911Methods matter in repeating ocean acidification studies.Nature2020
32687632Probing SWATH-MS as a tool for proteome level quantification in a nonmodel fish.Mol Ecol Resour2020
33008461Viral ecogenomics across the Porifera.Microbiome2020
33087911Methods matter in repeating ocean acidification studies.Nature2020
32687632Probing SWATH-MS as a tool for proteome level quantification in a nonmodel fish.Mol Ecol Resour2020
33008461Viral ecogenomics across the Porifera.Microbiome2020
31629687Nuclear AGO1 Regulates Gene Expression by Affecting Chromatin Architecture in Human Cells.Cell Syst2019
31629687Nuclear AGO1 Regulates Gene Expression by Affecting Chromatin Architecture in Human Cells.Cell Syst2019
31832196Neural effects of elevated CO<sub>2</sub> in fish may be amplified by a vicious cycle.Conserv Physiol2019
30203521Finding Nemo's Genes: A chromosome-scale reference assembly of the genome of the orange clownfish Amphiprion percula.Mol Ecol Resour2019
31832196Neural effects of elevated CO<sub>2</sub> in fish may be amplified by a vicious cycle.Conserv Physiol2019
30203521Finding Nemo's Genes: A chromosome-scale reference assembly of the genome of the orange clownfish Amphiprion percula.Mol Ecol Resour2019
29255298An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish.Nat Ecol Evol2018
30267545Phenotypic and molecular consequences of stepwise temperature increase across generations in a coral reef fish.Mol Ecol2018
30356950Morphological characterization of virus-like particles in coral reef sponges.PeerJ2018
29967360Inductively actuated micro needles for on-demand intracellular delivery.Sci Rep2018
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Collaborators

David A Hume
Mater Research Institute-UQ, Translational Research Institute
Co-authored papers 35
Christine A Wells
The University of Melbourne
Co-authored papers 20
Carlo Vittorio Cannistraci
Center for Complex Network Intelligence (CCNI), Tsinghua University
Co-authored papers 14
Piero Carninci
RIKEN Center for Integrative Medical Sciences
Co-authored papers 13
Yoshihide Hayashizaki
Center for Integrative Medical Sciences
Co-authored papers 13
Harukazu Suzuki
RIKEN Center for Integrative Medical Sciences
Co-authored papers 11
Alistair R R Forrest
RIKEN Center for Integrative Medical Sciences
Co-authored papers 10
Sean M Grimmond
The University of Melbourne
Co-authored papers 9
Shintaro Katayama
Folkhalsan Research Center
Co-authored papers 9
Vladimir B Bajic
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 9
Boris Lenhard
MRC London Institute of Medical Sciences
Co-authored papers 8
Jun Kawai
RIKEN Center for Integrative Medical Sciences
Co-authored papers 8
Julian Gough
Medical Research Council Laboratory of Molecular Biology
Co-authored papers 7
Shiro Fukuda
Graduate School of Medicine, Osaka University
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Rohan D Teasdale
The University of Queensland
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Kai Tan
University of Pennsylvania
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Valerio Orlando
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 6
Trey Ideker (CM4AI)
University of California San Diego
Co-authored papers 6
Mutsumi Kanamori-Katayama
Karolinska Institutet
Co-authored papers 6
Martin C Frith
Artificial Intelligence Research Center, University of Tokyo
Co-authored papers 6
Albin Sandelin
University of Copenhagen
Co-authored papers 6
Takeya Kasukawa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 6
Yasushi Okazaki
Intractable Disease Research Center, Graduate School of Medicine, Juntendo University
Co-authored papers 6
Hideya Kawaji
RIKEN Center for Integrative Medical Sciences
Co-authored papers 6
Jesper Tegn??r
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 6
Colin A Semple
Institute of Genetics and Cancer, University of Edinburgh
Co-authored papers 5
John S Mattick
Australia UNSW RNA Institute
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Masaaki Furuno
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Release 1.2