Author details

Full Name

Kevin Y Yip

Affiliation

ORCID

Career Start Year

2004

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37831068	RNF185 Control of COL3A1 Expression Limits Prostate Cancer Migration and Metastatic Potential.	Mol Cancer Res	2024
37125963	Identification of a Common Variant for Coronary Heart Disease at PDE1A Contributes to Individualized Treatment Goals and Risk Stratification of Cardiovascular Complications in Chinese Patients With Type 2 Diabetes.	Diabetes Care	2023
36584300	Hypomorphic and dominant-negative impact of truncated SOX9 dysregulates Hedgehog-Wnt signaling, causing campomelia.	Proc Natl Acad Sci U S A	2023
37019619	Targeting PPAR-gamma counteracts tumour adaptation to immune-checkpoint blockade in hepatocellular carcinoma.		2023
36879684	ICI efficacy information portal: a knowledgebase for responder prediction to immune checkpoint inhibitors.		2023
37188670	DNA methylation markers for kidney function and progression of diabetic kidney disease.	Nat Commun	2023
34736960	Sirtuin 7 super-enhancer drives epigenomic reprogramming in hepatocarcinogenesis.	Cancer Letters	2022
35896551	Author Correction: Whole-genome profiling of nasopharyngeal carcinoma reveals viral-host co-operation in inflammatory NF-ÎºB activation and immune escape.	Nat Commun	2022
35561158	Deep learning identifies and quantifies recombination hotspot determinants.	Bioinformatics	2022
35668367	Accurate reconstruction of viral genomes in human cells from short reads using iterative refinement.	BMC Genomics	2022
36443333	Whole genome sequencing reveals epistasis effects within RET for Hirschsprung disease.	Sci Rep	2022
33394602	Racial, ethnic, and healthcare disparities in rheumatoid arthritis.	Current Opinion in Rheumatology	2021
34234122	Whole-genome profiling of nasopharyngeal carcinoma reveals viral-host co-operation in inflammatory NF-ÎºB activation and immune escape.	Nat Commun	2021
33469163	Horseshoe crab genomes reveal the evolution of genes and microRNAs after three rounds of whole genome duplication.	Communications Biology	2021
33827976	A selective HDAC8 inhibitor potentiates antitumor immunity and efficacy of immune checkpoint blockade in hepatocellular carcinoma.	Science Translational Medicine	2021
33772052	A proof-of-concept study for the pathogenetic role of enhancer hypomethylation of MYBPHL in multiple myeloma.	Scientific Reports	2021
34257379	Identification and characterization of a novel Epstein-Barr Virus-encoded circular RNA from LMP-2 Gene.	Scientific Reports	2021
30895290	Shaping the nebulous enhancer in the era of high-throughput assays and genome editing.	Brief Bioinform	2020
32142308	Detection of Hole Pockets in the Candidate Type-II Weyl Semimetal MoTe_{2} from Shubnikov-de Haas Quantum Oscillations.	Physical Review Letters	2020
31852824	Spectroscopic fingerprint of chiral Majorana modes at the edge of a quantum anomalous Hall insulator/superconductor heterostructure.	Proceedings of the National Academy of Sciences of the United States of America	2020
33381843	A general near-exact k-mer counting method with low memory consumption enables de novo assembly of 106Ã¿ human sequence data in 2.7 hours.		2020
32737473	Supervised enhancer prediction with epigenetic pattern recognition and targeted validation.	Nat Methods	2020
32948616	Whole-genome analysis of noncoding genetic variations identifies multiscale regulatory element perturbations associated with Hirschsprung disease.	Genome Res	2020
32728046	An integrative ENCODE resource for cancer genomics.	Nat Commun	2020
32561724	Jellyfish genomes reveal distinct homeobox gene clusters and conservation of small RNA processing.	Nature Communications	2020
33113380	G9a Plays Distinct Roles in Maintaining DNA Methylation, Retrotransposon Silencing, and Chromatin Looping.	Cell Reports	2020
31508873	Why are we still using opioids for osteoarthritis?	International Journal of Clinical Practice	2020
30659195	Aberrant enhancer hypomethylation contributes to hepatic carcinogenesis through global transcriptional reprogramming.	Nat Commun	2019
31831663	Measuring magnetic field texture in correlated electron systems under extreme conditions.	Science	2019
30529019	Comparative analysis of single-cell parallel sequencing approaches in oocyte application.	International Journal of Biochemistry and Cell Biology	2019
31289833	OMMA enables population-scale analysis of complex genomic features and phylogenomic relationships from nanochannel-based optical maps.	Gigascience	2019
30782641	New guidelines for DNA methylome studies regarding 5-hydroxymethylcytosine for understanding transcriptional regulation.	Genome Research	2019
31332376	Reply to 'Inflated performance measures in enhancer-promoter interaction-prediction methods'.	Nature Genetics	2019
30833565	Genome maps across 26 human populations reveal population-specific patterns of structural variation.	Nat Commun	2019
29230817	EBV-encoded miRNAs target ATM-mediated response in nasopharyngeal carcinoma.	Journal of Pathology	2018
30405107	Establishment and characterization of new tumor xenografts and cancer cell lines from EBV-positive nasopharyngeal carcinoma.	Nature Communications	2018
30217742	Identification of Genes Associated With Hirschsprung Disease, Based on Whole-Genome Sequence Analysis, and Potential Effects on Enteric Nervous System Development.	Gastroenterology	2018
29862022	Case Report: Exome sequencing reveals recurrent mutations and a loss-of-function mutation in a rare undifferentiated tongue sarcoma.	F1000Research	2018
29992318	Loss of tumor suppressor IGFBP4 drives epigenetic reprogramming in hepatic carcinogenesis.	Nucleic Acids Research	2018
29648573	A comprehensive web tool for toehold switch design.		2018
29329369	A network approach to exploring the functional basis of gene-gene epistatic interactions in disease susceptibility.		2018
28098136	Exome and genome sequencing of nasopharynx cancer identifies NF-ÎºB pathway activating mutations.	Nat Commun	2017
28505226	OMTools: a software package for visualizing and processing optical mapping data.		2017
28938868	START: a system for flexible analysis of hundreds of genomic signal tracks in few lines of SQL-like queries.	BMC Genomics	2017
28580936	Quasilinear quantum magnetoresistance in pressure-induced nonsymmorphic superconductor chromium arsenide.	Nature Communications	2017
28869592	Reconstruction of enhancer-target networks in 935 samples of human primary cells, tissues and cell lines.	Nat Genet	2017
29070845	Maximizing T by tuning nematicity and magnetism in FeSe S superconductors.	Nature Communications	2017
29195502	OMSV enables accurate and comprehensive identification of large structural variations from nanochannel-based single-molecule optical maps.	Genome Biol	2017
28172448	OMBlast: alignment tool for optical mapping using a seed-and-extend approach.	Bioinformatics	2017
27976738	Integrating Information in Biological Ontologies and Molecular Networks to Infer Novel Terms.	Scientific Reports	2016