Author details

Full Name

Qihui Zhu

Affiliation

Institute of Oceanology, Chinese Academy of Sciences

ORCID

Career Start Year

2005

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37612510	Assembly of 43 human Y chromosomes reveals extensive complexity and variation.	Nature	2023
34224879	Mako: A Graph-based Pattern Growth Approach to Detect Complex Structural Variants.	Genomics Proteomics Bioinformatics	2022
35525246	Recurrent inversion polymorphisms in humans associate with genetic instability and genomic disorders.	Cell	2022
35484572	SvAnna: efficient and accurate pathogenicity prediction of coding and regulatory structural variants in long-read genome sequencing.	Genome Med	2022
35085778	JAX-CNV: A Whole-genome Sequencing-based Algorithm for Copy Number Detection at Clinical Grade Level.	Genomics Proteomics Bioinformatics	2022
34559564	Sex-specific phenotypic effects and evolutionary history of an ancient polymorphic deletion of the human growth hormone receptor.	Sci Adv	2021
33789087	Expectations and blind spots for structural variation detection from long-read assemblies and short-read genome sequencing technologies.	Am J Hum Genet	2021
33760063	muCNV: Genotyping Structural Variants for Population-level Sequencing.	Bioinformatics	2021
33632895	Haplotype-resolved diverse human genomes and integrated analysis of structural variation.	Science	2021
34399705	A novel treatment strategy for lapatinib resistance in a subset of HER2-amplified gastric cancer.	BMC Cancer	2021
31965439	Identification of HSF1 Target Genes Involved in Thermal Stress in the Pacific Oyster Crassostrea gigas by ChIP-seq.	Mar Biotechnol (NY)	2020
30559417	Liriodendron genome sheds light on angiosperm phylogeny and species-pair differentiation.	Nat Plants	2019
31425522	TeXP: Deconvolving the effects of pervasive and autonomous transcription of transposable elements.	PLoS Comput Biol	2019
31274457	Reversible rearrangement of magnetic nanoparticles in solution studied using time-resolved SAXS method.	J Synchrotron Radiat	2019
30886340	De novo single-nucleotide and copy number variation in discordant monozygotic twins reveals disease-related genes.	Eur J Hum Genet	2019
30675017	Author Correction: Liriodendron genome sheds light on angiosperm phylogeny and species-pair differentiation.	Nat Plants	2019
29559002	FusorSV: an algorithm for optimally combining data from multiple structural variation detection methods.	Genome Biol	2018
30560892	High-resolution deconstruction of evolution induced by chemotherapy treatments in breast cancer xenografts.	Sci Rep	2018
29633279	Biological explanations for discordant noninvasive prenatal test results: Preliminary data and lessons learned.	Prenat Diagn	2018
29712845	Systematic analysis of copy number variation associated with congenital diaphragmatic hernia.	Proc Natl Acad Sci U S A	2018
27910023	Array-Based Comparative Genomic Hybridization (aCGH).	Methods Mol Biol	2017
28889973	Origin of the Reflectin Gene and Hierarchical Assembly of Its Protein.	Curr Biol	2017
26746430	Expression Characterization of Stress Genes Under High and Low Temperature Stresses in the Pacific Oyster, Crassostrea gigas.	Mar Biotechnol (NY)	2016
25720977	Characterization of an inhibitor of apoptosis protein in Crassostrea gigas clarifies its role in apoptosis and immune defense.	Dev Comp Immunol	2015
23589518	Isolation and diversity analysis of resistance gene homologues from switchgrass.	G3 (Bethesda)	2013
24014587	Primate genome architecture influences structural variation mechanisms and functional consequences.	Proc Natl Acad Sci U S A	2013
23593015	Balancing selection on a regulatory region exhibiting ancient variation that predates human-neandertal divergence.	PLoS Genet	2013
23554902	Genome and transcriptome analyses provide insight into the euryhaline adaptation mechanism of Crassostrea gigas.	PLoS One	2013
22904035	High-throughput discovery of mutations in tef semi-dwarfing genes by next-generation sequencing analysis.	Genetics	2012
22992520	The oyster genome reveals stress adaptation and complexity of shell formation.	Nature	2012
22797897	Regulatory element copy number differences shape primate expression profiles.	Proc Natl Acad Sci U S A	2012
21551031	The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.	Science	2011
21627829	Refinement of primate copy number variation hotspots identifies candidate genomic regions evolving under positive selection.	Genome Biol	2011
19674325	Selection on grain shattering genes and rates of rice domestication.	New Phytol	2009
19965430	The B73 maize genome: complexity, diversity, and dynamics.	Science	2009
18804074	Novel ACTG1 mutation causing autosomal dominant non-syndromic hearing impairment in a Chinese family.	J Genet Genomics	2008
17218640	Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice.	Mol Biol Evol	2007
16644142	Nucleotide substitution pattern in rice paralogues: implication for negative correlation between the synonymous substitution rate and codon usage bias.	Gene	2006
17038171	Statistical inference of chromosomal homology based on gene colinearity and applications to Arabidopsis and rice.	BMC Bioinformatics	2006
16892395	A novel mutation in GDF5 causes autosomal dominant symphalangism in two Chinese families.	Am J Med Genet A	2006
16551659	DRTF: a database of rice transcription factors.	Bioinformatics	2006
15948847	Phylogenetic relationships among A-genome species of the genus Oryza revealed by intron sequences of four nuclear genes.	New Phytol	2005

1 - 42 of 42

Marc Dabad

Universitat de Barcelona (UB)

Career Start Year 2013

Number of shared co-authors 3

Monnat Pongpanich

Chulalongkorn University

Career Start Year 2010

Number of shared co-authors 0

Marta Gut

Universitat de Barcelona (UB)

Career Start Year 2010

Number of shared co-authors 11

Aakrosh Ratan

Center for Public Health Genomics, University of Virginia

Career Start Year 2008

Number of shared co-authors 14

Martin Kircher

Berlin Institute of Health (BIH) at Charite-Universitatsmedizin Berlin

Career Start Year 2008

Number of shared co-authors 3

Stephan Ossowski

Institute of Medical Genetics and Applied Genomics, University of Tubingen

Career Start Year 2006

Number of shared co-authors 3

Francesc L??pez-Gir??ldez

Yale Center for Genomic Analysis

Career Start Year 2005

Number of shared co-authors 5

Jeffrey A Rosenfeld

Cancer Institute of New Jersey

Career Start Year 2004

Number of shared co-authors 13

Jue Ruan

Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences

Career Start Year 2004

Number of shared co-authors 10

Manolis Kellis

Massachusetts Institute of Technology

Career Start Year 2003

Number of shared co-authors 21

Brad A Chapman

Harvard T.H. Chan School of Public Health

Career Start Year 2003

Number of shared co-authors 3

Christie L Kovar

Baylor College of Medicine

Career Start Year 2002

Number of shared co-authors 23

Tyler Alioto

Universitat de Barcelona (UB)

Career Start Year 2001

Number of shared co-authors 12

Jun Yu

Beijing Institute of Genomics, Chinese Academy of Sciences

Career Start Year 2001

Number of shared co-authors 14

Brent S Pedersen

Center for Molecular Medicine, University Medical Center Utrecht

Career Start Year 2001

Number of shared co-authors 2

Jeong-Hyeon Choi

National Marine Biodiversity Institute of Korea

Career Start Year 2000

Number of shared co-authors 4

Sarah J Wheelan

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1998

Number of shared co-authors 8

Ian Korf

University of California davis

Career Start Year 1998

Number of shared co-authors 19

Vineet Bafna

University of California San Diego

Career Start Year 1998

Number of shared co-authors 5

Jane Rogers

The Wellcome Trust Sanger Institute

Career Start Year 1998

Number of shared co-authors 25

Guillaume Bourque

Institute for the Advanced Study of Human Biology (ASHBi), Kyoto University

Career Start Year 1997

Number of shared co-authors 11

Steven J M Jones

University of British Columbia

Career Start Year 1995

Number of shared co-authors 20

Ping Liang

College of Chemistry and Chemical Engineering, Hunan University

Career Start Year 1995

Number of shared co-authors 1

Mark Yandell

University of Utah

Career Start Year 1994

Number of shared co-authors 19

LaDeana W Hillier

University of Washington

Career Start Year 1991

Number of shared co-authors 28

Donna M Muzny

Baylor College of Medicine

Career Start Year 1988

Number of shared co-authors 42

James C Mullikin

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1985

Number of shared co-authors 32

Brian J Haas

Broad Institute of MIT and Harvard

Career Start Year 1981

Number of shared co-authors 13

Kelly A Frazer

University of California, USA Institute for Genomic Medicine

Career Start Year 1967

Number of shared co-authors 11

Richard Durbin

University of Cambridge

Career Start Year 1964

Number of shared co-authors 32

row(s) 1 - 30 of 30

Chengsheng Zhang

Co-authored papers 10

Charles Lee

Co-authored papers 8

Ryan E Mills

University of Michigan Medical School ann arbor

Co-authored papers 6

Mark Gerstein

Yale University

Co-authored papers 5

Jan O Korbel

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 5

Evan E Eichler

University of Washington

Co-authored papers 5

Tobias Marschall

Center for Digital Medicine, Heinrich Heine University Dusseldorf

Co-authored papers 4

Feyza Yilmaz

University of Colorado Denver

Co-authored papers 4

Kai Ye

Co-authored papers 3

Lixing Yang

University of Chicago, USA University of Chicago Comprehensive Cancer Center

Co-authored papers 3

Christine R Beck

University of Connecticut Health Center

Co-authored papers 3

Fabio C P Navarro

Yale University

Co-authored papers 2

Mark J P Chaisson

University of Southern California

Co-authored papers 2

Viviana Simon

Icahn School of Medicine at Mount Sinai

Co-authored papers 1

Weichen Zhou

Chengdu First People's Hospital

Co-authored papers 1

Charles Lee

Co-authored papers 1

Rick Westerman

Co-authored papers 1

Jeremy M Boss

Emory University School of Medicine

Co-authored papers 1

Shamil R Sunyaev

Harvard Medical School

Co-authored papers 1

Adam C English

Baylor College of Medicine Human Genome Sequencing Center

Co-authored papers 1

Damian Smedley

William Harvey Research Institute, Queen Mary University of London

Co-authored papers 1

Jason E Waligorski

Washington University School of Medicine

Co-authored papers 1

Michael S Waterman

Biocomplexity Institute and Initiative

Co-authored papers 1

Chris Tyler-Smith

Wellcome Sanger Institute

Co-authored papers 1

Ginger A Metcalf

Co-authored papers 1

Sunita Kumari

Manav Rachna International Institute of Research and Studies

Co-authored papers 1

Jun Wang

Zhongnan Hospital of Wuhan University

Co-authored papers 1

David R Nelson

University of Tennessee Health Science Center

Co-authored papers 1

Na Zhang

Obstetrics and Gynecology Hospital of Fudan University

Co-authored papers 1

Justin T Reese

Lawrence Berkeley National Laboratory

Co-authored papers 1

1 - 30

Author Details

Column Actions

Recommended Authors

Collaborators