Author details

Full Name

Akdes Serin Harmanci

Affiliation

ORCID

Career Start Year

2011

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36787748	Glioma epileptiform activity and progression are driven by IGSF3-mediated potassium dysregulation.	Neuron	2023
36250346	CXCR4 expression is associated with proneural-to-mesenchymal transition in glioblastoma.	Int J Cancer	2023
36227281	Hypermitotic meningiomas harbor DNA methylation subgroups with distinct biological and clinical features.	Neuro Oncol	2023
37944590	Targeted gene expression profiling predicts meningioma outcomes and radiotherapy responses.	Nat Med	2023
37805627	Super-enhancer hijacking drives ectopic expression of hedgehog pathway ligands in meningiomas.	Nat Commun	2023
37318677	Integrated clinical genomic analysis reveals xenobiotic metabolic genes are downregulated in meningiomas of current smokers.	J Neurooncol	2023
37380778	Remote neuronal activity drives glioma progression through SEMA4F.	Nature	2023
36993741	Targeted gene expression profiling predicts meningioma outcomes and radiotherapy responses.	Res Sq	2023
36993539	Remote neuronal activity drives glioma infiltration via Sema4f.	bioRxiv	2023
36993256	Inhibitory input directs astrocyte morphogenesis through glial GABA R.		2023
36729132	Even heterozygous loss of CDKN2A/B greatly accelerates recurrence in aggressive meningioma.	Acta Neuropathol	2023
37100909	Inhibitory input directs astrocyte morphogenesis through glial GABAR.		2023
36787749	Social deprivation induces astrocytic TRPA1-GABA suppression of hippocampal circuits.		2023
34872929	Lunatic Fringe-GFP Marks Lamina-Specific Astrocytes That Regulate Sensory Processing.	J Neurosci	2022
36539717	XCVATR: detection and characterization of variant impact on the Embeddings of single -cell and bulk RNA-sequencing samples.	BMC Genomics	2022
34982878	Racial and Socioeconomic Disparities in Patients With Meningioma: A Retrospective Cohort Study.	Neurosurgery	2022
35108039	Multiple approaches converge on three biological subtypes of meningioma and extract new insights from published studies.	Sci Adv	2022
35099915	Predictors of postoperative seizure outcome in supratentorial meningioma.	Journal of Neurosurgery	2021
32764695	METAP1 mutation is a novel candidate for autosomal recessive intellectual disability.	J Hum Genet	2021
34887573	PPIL4 is essential for brain angiogenesis and implicated in intracranial aneurysms in humans.	Nat Med	2021
31501853	EpiSAFARI: sensitive detection of valleys in epigenetic signals for enhancing annotations of functional elements.	Bioinformatics	2020
31900397	CaSpER identifies and visualizes CNV events by integrative analysis of single-cell or bulk RNA-sequencing data.	Nat Commun	2020
32949309	Identification of novel fusion transcripts in meningioma.	J Neurooncol	2020
29676392	Integrated genomic analyses of de novo pathways underlying atypical meningiomas.	Nat Commun	2018
28153049	Longitudinal analysis of treatment-induced genomic alterations in gliomas.	Genome Med	2017
28630369	<i>ALPK3</i> gene mutation in a patient with congenital cardiomyopathy and dysmorphic features.	Cold Spring Harb Mol Case Stud	2017
28323122	Exome analysis of the evolutionary path of hepatocellular adenoma-carcinoma transition, vascular invasion and brain dissemination.	J Hepatol	2017
28195122	Integrated genomic analyses of de novo pathways underlying atypical meningiomas.	Nat Commun	2017
27548314	Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas.	Nat Genet	2016
26740239	A patient with a novel homozygous missense mutation in FTO and concomitant nonsense mutation in CETP.	J Hum Genet	2016
26618343	Integrated genomic characterization of IDH1-mutant glioma malignant progression.	Nat Genet	2016
25220016	NGLY1 mutation causes neuromotor impairment, intellectual disability, and neuropathy.	Eur J Med Genet	2015
25740784	Somatic POLE mutations cause an ultramutated giant cell high-grade glioma subtype with better prognosis.	Neuro Oncol	2015
25016225	Paediatric hepatocellular carcinoma due to somatic CTNNB1 and NFE2L2 mutations in the setting of inherited bi-allelic ABCB11 mutations.	J Hepatol	2014
23348505	Genomic analysis of non-NF2 meningiomas reveals mutations in TRAF7, KLF4, AKT1, and SMO.	Science	2013
22110631	Mitochondrial-associated cell death mechanisms are reset to an embryonic-like state in aged donor-derived iPS cells harboring chromosomal aberrations.	PLoS ONE	2011
21699691	DeBi: Discovering Differentially Expressed Biclusters using a Frequent Itemset Approach.	Algorithms for Molecular Biology	2011