Author details

Full Name

Michael Sammeth

Affiliation

ORCID

Career Start Year

2003

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37876822	Evaluating blood oxygen saturation measurements by popular fitness trackers in postoperative patients: A prospective clinical trial.		2023
36583938	Accuracy and Systematic Biases of Heart Rate Measurements by Consumer-Grade Fitness Trackers in Postoperative Patients: Prospective Clinical Trial.		2022
35956113	The Use of Non-Invasive Continuous Blood Pressure Measuring (ClearSight) during Central Neuraxial Anaesthesia for Caesarean Section-A Retrospective Validation Study.	Journal of Clinical Medicine	2022
33479356	Analysis of ovarian transcriptomes reveals thousands of novel genes in the insect vector Rhodnius prolixus.	Scientific Reports	2021
30552977	Characterization of HPV integration, viral gene expression and E6E7 alternative transcripts by RNA-Seq: A descriptive study in invasive cervical cancer.	Genomics	2019
31616643	Echocardiographic Measurements in a Preclinical Model of Chronic Chagasic Cardiomyopathy in Dogs: Validation and Reproducibility.	Frontiers in Cellular and Infection Microbiology	2019
29497070	Landscape of the spliced leader trans-splicing mechanism in Schistosoma mansoni.	Scientific Reports	2018
30303955	Transcriptomic and functional analyses of the piRNA pathway in the Chagas disease vector Rhodnius prolixus.	PLoS Neglected Tropical Diseases	2018
29868795	An automated method for detecting alternatively spliced protein domains.		2018
29440659	The effects of death and post-mortem cold ischemia on human tissue transcriptomes.	Nat Commun	2018
29277878	Comparative Genomics in Homo sapiens.	Methods in Molecular Biology	2018
29277877	Comparative Genomics in Drosophila.	Methods in Molecular Biology	2018
27918580	Correction: Gene Expansion Shapes Genome Architecture in the Human Pathogen Lichtheimia corymbifera: An Evolutionary Genomics Analysis in the Ancient Terrestrial Mucorales (Mucoromycotina).	PLoS Genet	2016
27617755	Sequence variation between 462 human individuals fine-tunes functional sites of RNA processing.	Sci Rep	2016
25954002	Human genomics. The human transcriptome across tissues and individuals.	Science	2015
25577392	Analysis of alternative splicing events in custom gene datasets by AStalavista.	Methods in Molecular Biology	2015
25954003	Human genomics. Effect of predicted protein-truncating genetic variants on the human transcriptome.	Science	2015
25249621	Nova1 is a master regulator of alternative splicing in pancreatic beta cells.	Nucleic Acids Research	2014
24379348	RNA sequencing identifies dysregulation of the human pancreatic islet transcriptome by the saturated fatty acid palmitate.		2014
25121733	Gene expansion shapes genome architecture in the human pathogen Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient terrestrial mucorales (Mucoromycotina).	PLoS Genet	2014
24037378	Transcriptome and genome sequencing uncovers functional variation in humans.	Nature	2013
24037425	Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories.	Nat Biotechnol	2013
22113879	Estimation of alternative splicing variability in human populations.	Genome Res	2012
22962361	Modelling and simulating generic RNA-Seq experiments with the flux simulator.	Nucleic Acids Res	2012
22384018	Evaluating characteristics of de novo assembly software on 454 transcriptome data: a simulation approach.	PLoS One	2012
22955620	Landscape of transcription in human cells.	Nature	2012
22412385	The human pancreatic islet transcriptome: expression of candidate genes for type 1 diabetes and the impact of pro-inflammatory cytokines.	PLoS Genetics	2012
23103880	The GEM mapper: fast, accurate and versatile alignment by filtration.	Nat Methods	2012
19864250	Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing.	Briefings in Bioinformatics	2010
20220756	Transcriptome genetics using second generation sequencing in a Caucasian population.	Nature	2010
19684599	Nucleosome positioning as a determinant of exon recognition.	Nat Struct Mol Biol	2009
19689216	Complete alternative splicing events are bubbles in splicing graphs.	Journal of Computational Biology	2009
18688268	A general definition and nomenclature for alternative splicing events.	PLoS Comput Biol	2008
17485470	ASTALAVISTA: dynamic and flexible analysis of alternative splicing events in custom gene datasets.	Nucleic Acids Research	2007
17967176	Based Upon Repeat Pattern (BURP): an algorithm to characterize the long-term evolution of Staphylococcus aureus populations based on spa polymorphisms.	BMC Microbiology	2007
17085848	Comparing tandem repeats with duplications and excisions of variable degree.	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2006
16418234	Panta rhei (QAlign2): an open graphical environment for sequence analysis.	Bioinformatics	2006
16609972	Global multiple-sequence alignment with repeats.	Proteins	2006
12912847	QAlign: quality-based multiple alignments with dynamic phylogenetic analysis.	Bioinformatics	2003
14534189	Divide-and-conquer multiple alignment with segment-based constraints.	Bioinformatics	2003
14611664	RIDOM: comprehensive and public sequence database for identification of Mycobacterium species.	BMC Infectious Diseases	2003