Author details

Full Name

Inkyung Jung

Affiliation

ORCID

Career Start Year

2008

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36915530	A novel splicing variant of DJ-1 in Parkinson's disease induces mitochondrial dysfunction.	Heliyon	2023
37013988	Probabilistic establishment of speckle-associated inter-chromosomal interactions.		2023
37453058	Spatial and clonality-resolved 3D cancer genome alterations reveal enhancer-hijacking as a potential prognostic marker for colorectal cancer.		2023
37058563	Characterization of altered molecular mechanisms in Parkinson's disease through cell type-resolved multiomics analyses.	Sci Adv	2023
37365384	A virtual memory CD8 T cell-originated subset causes alopecia areata through innate-like cytotoxicity.		2023
36979633	Epigenetic Regulators of DNA Cytosine Modification: Promising Targets for Cancer Therapy.		2023
34628052	PD-1 and TIGIT downregulation distinctly affect the effector and early memory phenotypes of CD19-targeting CAR TÂ cells.	Molecular Therapy	2022
36229591	Single-cell transcriptome analyses reveal distinct gene expression signatures of severe COVID-19 in the presence of clonal hematopoiesis.	Experimental and Molecular Medicine	2022
35677644	HLA-I-restricted CD8 TÂ cell immunity may accelerate tumorigenesis in conjunction with VHL inactivation.	iScience	2022
35791737	Corrigendum to: CHD4 Conceals Aberrant CTCF-Binding Sites at TAD Interiors by Regulating Chromatin Accessibility in Mouse Embryonic Stem Cells.	Molecules and Cells	2022
35473985	BAP1 shapes the bone marrow niche for lymphopoiesis by fine-tuning epigenetic profiles in endosteal mesenchymal stromal cells.	Cell Death and Differentiation	2022
36601579	scAVENGERS: a genotype-based deconvolution of individuals in multiplexed single-cell ATAC-seq data without reference genotypes.		2022
33992531	Hi-C as a molecular rangefinder to examine genomic rearrangements.	Seminars in Cell and Developmental Biology	2022
34764232	CHD4 Conceals Aberrant CTCF-Binding Sites at TAD Interiors by Regulating Chromatin Accessibility in Mouse Embryonic Stem Cells.	Molecules and Cells	2021
34127022	Molecular laterality encodes stress susceptibility in the medial prefrontal cortex.	Molecular Brain	2021
33539780	Recording of elapsed time and temporal information about biological events using Cas9.	Cell	2021
33840167	Functional annotation of lung cancerâ¿¿associated genetic variants by cell typeâ¿¿specific epigenome and long-range chromatin interactome.		2021
33245777	3DIV update for 2021: a comprehensive resource of 3D genome and 3D cancer genome.	Nucleic Acids Research	2021
34737268	A compendium of chromatin contact maps reflecting regulation by chromatin remodelers in budding yeast.	Nature Communications	2021
33050006	Chromatin Interaction Changes during the iPSC-NPC Model to Facilitate the Study of Biologically Significant Genes Involved in Differentiation.	Genes (Basel)	2020
33151112	Long-range chromatin interactions in pathogenic gene expression control.	Transcription	2020
32651212	Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19.	Science immunology	2020
32817243	Persistence of Fear Memory Depends on a Delayed Elevation of BAF53b and FGF1 Expression in the Lateral Amygdala.	Journal of Neuroscience	2020
32975781	DNA Methylation of Intragenic CpG Islands are Required for Differentiation from iPSC to NPC.	Stem Cell Reviews and Reports	2020
33293480	NEUROD1 Intrinsically Initiates Differentiation of Induced Pluripotent Stem Cells into Neural Progenitor Cells.	Molecules and Cells	2020
33335029	4-1BB co-stimulation further enhances anti-PD-1-mediated reinvigoration of exhausted CD39 CD8 T cells from primary and metastatic sites of epithelial ovarian cancers.	Journal for ImmunoTherapy of Cancer	2020
32726616	PHF7 Modulates BRDT Stability and Histone-to-Protamine Exchange during Spermiogenesis.	Cell Reports	2020
31362468	Characterization of Structural Variations in the Context of 3D Chromatin Structure.	Molecules and Cells	2019
31704735	VEGF-A drives TOX-dependent T cell exhaustion in anti-PD-1-resistant microsatellite stable colorectal cancers.	Sci Immunol	2019
30546966	Effect of combined anti-PD-1 and temozolomide therapy in glioblastoma.	OncoImmunology	2019
30925856	A new class of constitutively active super-enhancers is associated with fast recovery of 3D chromatin loops.	BMC Bioinformatics	2019
31501517	A compendium of promoter-centered long-range chromatin interactions in the human genome.	Nat Genet	2019
30737385	Intestinal non-canonical NFÎºB signaling shapes the local and systemic immune response.	Nat Commun	2019
29106613	3DIV: A 3D-genome Interaction Viewer and database.	Nucleic Acids Res	2018
29483654	The human noncoding genome defined by genetic diversity.	Nat Genet	2018
29263092	Probing the interaction between the histone methyltransferase/deacetylase subunit RBBP4/7 and the transcription factor BCL11A in epigenetic complexes.	Journal of Biological Chemistry	2018
27956697	Epithelial Hypoxia-Inducible Factor 2Î± Facilitates the Progression of Colon Tumors through Recruiting Neutrophils.	Molecular and Cellular Biology	2017
28417999	A tiling-deletion-based genetic screen for cis-regulatory element identification in mammalian cells.	Nat Methods	2017
27626377	Broad histone H3K4me3 domains in mouse oocytes modulate maternal-to-zygotic transition.	Nature	2016
26813977	A new class of temporarily phenotypic enhancers identified by CRISPR/Cas9-mediated genetic screening.	Genome Res	2016
26605523	Corrigendum: Human body epigenome maps reveal noncanonical DNA methylation variation.	Nature	2016
27851967	A Compendium of Chromatin Contact Maps Reveals Spatially Active Regions in the Human Genome.	Cell Rep	2016
26030523	Human body epigenome maps reveal noncanonical DNA methylation variation.	Nature	2015
25693566	Integrative analysis of haplotype-resolved epigenomes across human tissues.	Nature	2015
25693564	Chromatin architecture reorganization during stem cell differentiation.	Nature	2015
26276636	CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function.	Cell	2015
26602082	Global mapping of the regulatory interactions of histone residues.	FEBS Lett	2015
23408895	Genetic landscape of open chromatin in yeast.	PLoS Genet	2013
23266811	LinkNMF: identification of histone modification modules in the human genome using nonnegative matrix factorization.	Gene	2013
22709829	Histone modification profiles characterize function-specific gene regulation.	J Theor Biol	2012