|
| 36658342 | Genome-scale metabolic reconstruction of 7,302 human microorganisms for personalized medicine. | Nat Biotechnol | 2023 |
| 36857575 | kb_DRAM: annotation and metabolic profiling of genomes with DRAM in KBase. | Bioinformatics | 2023 |
| 34719000 | Application of the Metabolic Modeling Pipeline in KBase to Categorize Reactions, Predict Essential Genes, and Predict Pathways in an Isolate Genome. | Methods Mol Biol | 2022 |
| 32986834 | The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes. | Nucleic Acids Res | 2021 |
| 33208936 | Publisher Correction: A genomic catalog of Earth's microbiomes. | Nat Biotechnol | 2021 |
| 33179751 | The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes. | Nucleic Acids Res | 2021 |
| 32265554 | Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing. | Nat Biotechnol | 2020 |
| 32943555 | Draft Genome Sequence of <i>Pseudarthrobacter</i> sp. Strain ATCC 49442 (Formerly Micrococcus luteus), a Pyridine-Degrading Bacterium. | Microbiol Resour Announc | 2020 |
| 32816982 | Draft Genome Sequence of 2-Methylpyridine-, 2-Ethylpyridine-, and 2-Hydroxypyridine-Degrading <i>Arthrobacter</i> sp. Strain ATCC 49987. | Microbiol Resour Announc | 2020 |
| 32123384 | MEMOTE for standardized genome-scale metabolic model testing. | Nat Biotechnol | 2020 |
| 31048380 | Draft Genome Sequence of <i>Enterobacter</i> sp. Strain A8, a Carbazole-Degrading Bacterium. | Microbiol Resour Announc | 2019 |
| 31221646 | Draft Genome Sequence of <i>Rhodococcus</i> sp. Strain ATCC 49988, a Quinoline-Degrading Bacterium. | Microbiol Resour Announc | 2019 |
| 29222751 | Reconstruction and Analysis of Central Metabolism in Microbes. | Methods Mol Biol | 2018 |
| 29979655 | KBase: The United States Department of Energy Systems Biology Knowledgebase. | Nat Biotechnol | 2018 |
| 28827682 | Metabolic Reconstruction and Modeling Microbial Electrosynthesis. | Sci Rep | 2017 |
| 28168783 | A novel signal transduction protein: Combination of solute binding and tandem PAS-like sensor domains in one polypeptide chain. | Protein Sci | 2017 |
| 28362260 | Evolution of substrate specificity in a retained enzyme driven by gene loss. | Elife | 2017 |
| 27379044 | From DNA to FBA: How to Build Your Own Genome-Scale Metabolic Model. | Front Microbiol | 2016 |
| 27933038 | Computing and Applying Atomic Regulons to Understand Gene Expression and Regulation. | Front Microbiol | 2016 |
| 27502787 | Modeling central metabolism and energy biosynthesis across microbial life. | BMC Genomics | 2016 |
| 28324362 | Enabling comparative modeling of closely related genomes: example genus Brucella. | 3 Biotech | 2015 |
| 24416233 | Comparative genomics of cultured and uncultured strains suggests genes essential for free-living growth of Liberibacter. | PLoS One | 2014 |
| 25178782 | Tapping the wealth of microbial data in high-throughput metabolic model reconstruction. | Methods Mol Biol | 2014 |
| 22582012 | Vitamin K2 is a mitochondrial electron carrier that rescues pink1 deficiency. | Science | 2012 |
| 21705586 | Genome sequences of the biotechnologically important Bacillus megaterium strains QM B1551 and DSM319. | J Bacteriol | 2011 |