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Author Details

Christian Dallago
TUM (Technical University of Munich) Department of Informatics
2019
17
11
Gloria M Sheynkman (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36454227LambdaPP: Fast and accessible protein-specific phenotype predictions.Protein Sci2023
36504138Novel machine learning approaches revolutionize protein knowledge.Trends Biochem Sci2023
34232869ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning.IEEE Trans Pattern Anal Mach Intell2022
36544476From sequence to function through structure: Deep learning for protein design.Comput Struct Biotechnol J2022
36451881GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics.bioRxiv2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
34791421ProteomicsDB: toward a FAIR open-source resource for life-science research.Nucleic Acids Res2022
33441905Embeddings from deep learning transfer GO annotations beyond homology.Sci Rep2021
36700108Light attention predicts protein location from the language of life.Bioinform Adv2021
34860157Author-sourced capture of pathway knowledge in computable form using Biofactoid.Elife2021
34519429SARS-CoV-2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms.Mol Syst Biol2021
33961736Learned Embeddings from Deep Learning to Visualize and Predict Protein Sets.Curr Protoc2021
33999203PredictProtein - Predicting Protein Structure and Function for 29 Years.Nucleic Acids Res2021
32150354Visualizing Human Protein-Protein Interactions and Subcellular Localizations on Cell Images Through CellMap.Curr Protoc Bioinformatics2020
31647099Pathway Commons 2019 Update: integration, analysis and exploration of pathway data.Nucleic Acids Res2020
30304492The EVcouplings Python framework for coevolutionary sequence analysis.Bioinformatics2019
31847804Modeling aspects of the language of life through transfer-learning protein sequences.BMC Bioinformatics2019
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Collaborators

Burkhard Rost
Technical University of Munich (TUM)
Co-authored papers 11
Chris Sander
Broad Institute of MIT and Harvard
Co-authored papers 4
Se??n I O'Donoghue
University of NSW
Co-authored papers 3
Ozgun Babur
Houston Methodist Research Institute
Co-authored papers 2
Benjamin M Gyori
Khoury College of Computer Sciences, Northeastern University
Co-authored papers 2
Gary D Bader
University of Toronto
Co-authored papers 2
Christine Orengo
University College London, Institute of Structural and Molecular Biology
Co-authored papers 2
Emek Demir
Knight Cancer Institute, Oregon Health & Science University
Co-authored papers 2
Tatyana Goldberg
TUM (Technical University of Munich) Department of Informatics
Co-authored papers 2
Augustin Luna
Harvard Medical School
Co-authored papers 2
Mark Gorelik
University of Florida
Co-authored papers 1
Paul Monaghan
University of Florida
Co-authored papers 1
Miguel A Andrade-Navarro
Institute of Organismic and Molecular Evolution, Johannes Gutenberg University
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Lucy J Colwell
Google Research
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Alan Bridge
carnegie mellon university
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Ana Conesa
Institute for Integrative Systems Biology, Spanish National Research Council (CSIC)
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Erica Watson Carter
University of Florida Citrus Research and Education Center
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David Vallenet
Institut Francois Jacob, CNRS, Universite d'Evry, Universite Paris-Saclay
Co-authored papers 1
Richard J Roberts
Co-authored papers 1
Liudmyla Kondratova
Genetics Institute, University of Florida
Co-authored papers 1
Thomas Brettin
University of Chicago
Co-authored papers 1
Stacey Cleveland
University of Florida
Co-authored papers 1
Reinhard Schneider
Co-authored papers 1
Cecilia N Arighi
University of Delaware
Co-authored papers 1
Adam M Deutschbauer
Lawrence Berkeley National Laboratory
Co-authored papers 1
Peter Uetz
Center for the Study of Biological Complexity, Virginia Commonwealth University
Co-authored papers 1
Peter R Weigele
New England Biolabs Inc.
Co-authored papers 1
Iddo Friedberg
Iowa State University
Co-authored papers 1
Irina A Rodionova
University of California at San Diego
Co-authored papers 1
Valerie Wood
University of Cambridge
Co-authored papers 1
Release 1.2