Author details

Full Name

Nir Ben-Tal

Affiliation

ORCID

Career Start Year

1992

Papers

160

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36934025	Cation/proton antiporters: novel structure-driven pharmaceutical opportunities.		2023
37855235	What can AlphaFold do for antimicrobial amyloids?		2023
36718848	Using evolutionary data to make sense of macromolecules with a "face-lifted" ConSurf.		2023
36835119	Identification and Analysis of Fungal-Specific Regions in the Cu Exporter CrpA That Are Essential for Cu Resistance but Not for Virulence.		2023
34822841	The copper-linked Escherichia coli AZY operon: Structure, metal binding, and a possible physiological role in copper delivery.	Journal of Biological Chemistry	2022
36177733	Allosteric links between the hydrophilic N-terminus and transmembrane core of human Na /H antiporter NHA2.	Protein Science	2022
36040261	Similar protein segments shared between domains of different evolutionary lineages.	Protein Science	2022
35931059	Homologues not needed: Structure prediction from a protein language model.	Structure	2022
36382275	Ultrasensitive chemiluminescent neuraminidase probe for rapid screening and identification of small-molecules with antiviral activity against influenza A virus in mammalian cells.	Chemical Science	2022
34416234	Titratable transmembrane residues and a hydrophobic plug are essential for manganese import via the Bacillus anthracis ABC transporter MntBC-A.	J Biol Chem	2021
33914546	Global Dynamics Renders Protein Sites with High Functional Response.	Journal of Physical Chemistry B	2021
34009324	Erratum to: Bridging themes: short protein segments found in different architectures.	Molecular Biology and Evolution	2021
34224746	Integrative Structural Biology in the Era of Accurate Structure Prediction.	Journal of Molecular Biology	2021
34273399	Towards Molecular Understanding of the pH Dependence Characterizing NhaA of Which Structural Fold is Shared by Other Transporters.	Journal of Molecular Biology	2021
33999203	PredictProtein - Predicting Protein Structure and Function for 29 Years.	Nucleic Acids Res	2021
34154768	Editorial overview: Sequences and topology: 'paths from sequence to structure'.	Current Opinion in Structural Biology	2021
33502503	Bridging Themes: Short Protein Segments Found in Different Architectures.	Molecular Biology and Evolution	2021
34085703	Structure of plant photosystem I-plastocyanin complex reveals strong hydrophobic interactions.	Biochemical Journal	2021
34330833	Gram-negative outer-membrane proteins with multiple Î²-barrel domains.	Proceedings of the National Academy of Sciences of the United States of America	2021
32864748	C5 conserved region of hydrophilic C-terminal part of Saccharomyces cerevisiae Nha1 antiporter determines its requirement of Erv14 COPII cargo receptor for plasma-membrane targeting.	Molecular Microbiology	2021
32797228	Potential Antigenic Cross-reactivity Between Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) and Dengue Viruses.	Clinical Infectious Diseases	2021
33166001	Structural motifs in protein cores and at protein-protein interfaces are different.	Protein Sci	2021
34619810	Using ConSurf to Detect Functionally Important Regions in RNA.	Current Protocols	2021
34957223	Editorial: Computational Approaches to Study the Impact of Mutations on Disease and Drug Resistance.	Front Mol Biosci	2021
34887518	Dimeric and high-resolution structures of Chlamydomonas Photosystem I from a temperature-sensitive Photosystem II mutant.	Communications Biology	2021
34648767	The Sigma-1 receptor is an ER-localized type II membrane protein.	Journal of Biological Chemistry	2021
33257549	An angular motion of a conserved four-helix bundle facilitates alternating access transport in the TtNapA and EcNhaA transporters.	Proceedings of the National Academy of Sciences of the United States of America	2020
32144203	Substrate recognition and ATPase activity of the cysteine/cystine ABC transporter YecSC-FliY.	Journal of Biological Chemistry	2020
32079721	On the evolution of protein-adenine binding.	Proceedings of the National Academy of Sciences of the United States of America	2020
32320672	Distinct Allosteric Networks Underlie Mechanistic Speciation of ABC Transporters.	Structure	2020
31702846	ConSurf-DB: An accessible repository for the evolutionary conservation patterns of the majority of PDB proteins.	Protein Science	2020
31427399	Metal Coordination Is Crucial for Geranylgeranyl Diphosphate Synthase-Bisphosphonate Interactions: A Crystallographic and Computational Analysis.	Molecular Pharmacology	2019
30298400	Navigating Among Known Structures in Protein Space.	Methods in Molecular Biology	2019
30329016	A natural upper bound to the accuracy of predicting protein stability changes upon mutations.	Bioinformatics	2019
31266447	DDGun: an untrained method for the prediction of protein stability changes upon single and multiple point variations.	BMC Bioinformatics	2019
29915236	Single-molecule probing of the conformational homogeneity of the ABC transporter BtuCD.	Nature Chemical Biology	2018
30310075	Broad phylogenetic analysis of cation/proton antiporters reveals transport determinants.	Nature Communications	2018
30489257	Evolutionary pathways of repeat protein topology in bacterial outer membrane proteins.	eLife	2018
30057025	Efflux Pumps Represent Possible Evolutionary Convergence onto the Î²-Barrel Fold.	Structure	2018
29078314	Complex evolutionary footprints revealed in an analysis of reused protein segments of diverse lengths.	Proceedings of the National Academy of Sciences of the United States of America	2017
28578875	Structural and Dynamics Characterization of the MerR Family Metalloregulator CueR in its Repression and Activation States.	Structure	2017
28710128	BcXYG1, a Secreted Xyloglucanase from , Triggers Both Cell Death and Plant Immune Responses.	Plant Physiology	2017
26821166	Systems-Wide Prediction of Enzyme Promiscuity Reveals a New Underground Alternative Route for Pyridoxal 5'-Phosphate Production in E. coli.	PLoS Comput Biol	2016
27166375	ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules.	Nucleic Acids Research	2016
26905293	The uncoupled ATPase activity of the ABC transporter BtuC2D2 leads to a hysteretic conformational change, conformational memory, and improved activity.	Scientific Reports	2016
26106847	Metal binding spectrum and model structure of the Bacillus anthracis virulence determinant MntA.	Metallomics	2015
25865247	CyToStruct: Augmenting the Network Visualization of Cytoscape with the Power of Molecular Viewers.	Structure	2015
26269288	Changes to the dynamic nature of hemagglutinin and the emergence of the 2009 pandemic H1N1 influenza virus.	Scientific Reports	2015
26506003	DynaFace: Discrimination between Obligatory and Non-obligatory Protein-Protein Interactions Based on the Complex's Dynamics.	PLoS Computational Biology	2015
26455800	ConTemplate Suggests Possible Alternative Conformations for a Query Protein of Known Structure.	Structure	2015