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Author Details

Brinda Vallat
Institute for Quantitative Biomedicine, State University of New Jersey
2008
22
13
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37953312The Nucleic Acid Knowledgebase: a new portal for 3D structural information about nucleic acids.Nucleic Acids Res2024
36420884RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning.Nucleic Acids Res2023
36738985RCSB Protein Data Bank: Efficient Searching and Simultaneous Access to One Million Computed Structure Models Alongside the PDB Structures Enabled by Architectural Advances.J Mol Biol2023
36828268ModelCIF: An Extension of PDBx/mmCIF Data Representation for Computed Structure Models.J Mol Biol2023
34676613RCSB Protein Data Bank: Celebrating 50â¿¿years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D.Protein Sci2022
35460671PDBx/mmCIF Ecosystem: Foundational Semantic Tools for Structural Biology.J Mol Biol2022
36474933Electron microscopy holdings of the Protein Data Bank: the impact of the resolution revolution, new validation tools, and implications for the future.Biophys Rev2022
36291635Protein Data Bank: A Comprehensive Review of 3D Structure Holdings and Worldwide Utilization by Researchers, Educators, and Students.Biomolecules2022
34866606New system for archiving integrative structures.Acta Crystallogr D Struct Biol2021
32695409The data universe of structural biology.IUCrJ2020
31278630Archiving and disseminating integrative structure models.J Biomol NMR2019
31780431Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures.Structure2019
31254668A Novel Acquired Exon 20 EGFR M766Q Mutation in Lung Adenocarcinoma Mediates Osimertinib Resistance but is Sensitive to Neratinib and Poziotinib.J Thorac Oncol2019
29657133Development of a Prototype System for Archiving Integrative/Hybrid Structure Models of Biological Macromolecules.Structure2018
30912485Anticipating innovations in structural biology.Q Rev Biophys2018
30617834Archiving of Integrative Structural Models.Adv Exp Med Biol2018
29727620SOD1 Phosphorylation by mTORC1 Couples Nutrient Sensing and Redox Regulation.Mol Cell2018
26252221Modularity of Protein Folds as a Tool for Template-Free Modeling of Structures.PLoS Comput Biol2015
23685209Modeling proteins using a super-secondary structure library and NMR chemical shift information.Structure2013
21244273Fast geometric consensus approach for protein model quality assessment.J Comput Biol2011
19326457Building and assessing atomic models of proteins from structural templates: learning and benchmarks.Proteins2009
18300226A template-finding algorithm and a comprehensive benchmark for homology modeling of proteins.Proteins2008
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Collaborators

John D Westbrook
The State University of New Jersey
Co-authored papers 12
Helen M Berman
The State University of New Jersey
Co-authored papers 12
Stephen K Burley
The State University of New Jersey
Co-authored papers 10
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 9
Catherine L Lawson
Institute for Quantitative Biomedicine, State University of New Jersey
Co-authored papers 9
Benjamin Webb
University of California san francisco
Co-authored papers 6
Dennis W Piehl
The State University of New Jersey
Co-authored papers 5
Ezra Peisach
The State University of New Jersey
Co-authored papers 5
Jasmine Young
The State University of New Jersey
Co-authored papers 5
Brian P Hudson
The State University of New Jersey
Co-authored papers 4
Zukang Feng
The State University of New Jersey
Co-authored papers 4
Christine Zardecki
The State University of New Jersey
Co-authored papers 4
Justin W Flatt
The State University of New Jersey
Co-authored papers 4
Jose M Duarte
University of California San Diego
Co-authored papers 4
Chenghua Shao
The State University of New Jersey
Co-authored papers 4
Robert Lowe
The State University of New Jersey
Co-authored papers 4
Maria Voigt
The State University of New Jersey
Co-authored papers 4
Chunxiao Bi
University of California San Diego
Co-authored papers 3
Monica Sekharan
The State University of New Jersey
Co-authored papers 3
Genji Kurisu
Institute for Protein Research, Osaka University
Co-authored papers 3
Joan Segura
University of California San Diego
Co-authored papers 3
Vladimir Guranovic
The State University of New Jersey
Co-authored papers 3
Sebastian Bittrich
University of California San Diego
Co-authored papers 3
Sai J Ganesan
University of California san francisco
Co-authored papers 3
Sameer Velankar
European Bioinformatics Institute
Co-authored papers 3
Shuchismita Dutta
The State University of New Jersey
Co-authored papers 3
Charmi Bhikadiya
University of California San Diego
Co-authored papers 3
Irina Persikova
The State University of New Jersey
Co-authored papers 2
Torsten Schwede
University of Basel
Co-authored papers 2
Andras Fiser
Albert Einstein College of Medicine
Co-authored papers 2
Release 1.2