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Author Details

Michael Place
Center for Genomic Science Innovation, University of Wisconsin-Madison
2004
26
14
Christopher Churas (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37503218Gene-by-environment interactions influence the fitness cost of gene copy-number variation in yeast.bioRxiv2023
37481264Gene-by-environment interactions influence the fitness cost of gene copy-number variation in yeast.G3 (Bethesda)2023
35883225Comparative chemical genomic profiling across plant-based hydrolysate toxins reveals widespread antagonism in fitness contributions.FEMS Yeast Res2022
35387233Comparative functional genomics identifies an iron-limited bottleneck in a <i>Saccharomyces cerevisiae</i> strain with a cytosolic-localized isobutanol pathway.Synth Syst Biotechnol2022
35993778Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates.Microbiol Resour Announc2022
36326440Identification of genetic interactions with priB links the PriA/PriB DNA replication restart pathway to double-strand DNA break repair in Escherichia coli.G3 (Bethesda)2022
34338637Natural variation in the consequences of gene overexpression and its implications for evolutionary trajectories.Elife2021
33858925Delila-PY, a Pipeline for Utilizing the Delila Suite of Software to Identify Potential DNA Binding Motifs.Microbiol Resour Announc2021
34592433Crabtree/Warburg-like aerobic xylose fermentation by engineered Saccharomyces cerevisiae.Metab Eng2021
32554783COnTORT: COmprehensive Transcriptomic ORganizational Tool for Simultaneously Retrieving and Organizing Numerous Gene Expression Data Sets from the NCBI Gene Expression Omnibus Database.Microbiol Resour Announc2020
32963084CRISpy-Pop: A Web Tool for Designing CRISPR/Cas9-Driven Genetic Modifications in Diverse Populations.G3 (Bethesda)2020
29738528Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response.PLoS Comput Biol2018
29474395Genome-wide association across Saccharomyces cerevisiae strains reveals substantial variation in underlying gene requirements for toxin tolerance.PLoS Genet2018
29240790Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress.PLoS Biol2017
29203667Electrostatic confinement and manipulation of DNA molecules for genome analysis.Proc Natl Acad Sci U S A2017
26056298Single-molecule analysis reveals widespread structural variation in multiple myeloma.Proc Natl Acad Sci U S A2015
26314885A clone-free, single molecule map of the domestic cow (Bos taurus) genome.BMC Genomics2015
23870653Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species.Gigascience2013
22885923Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses.Nat Genet2012
19468303Lineage-specific biology revealed by a finished genome assembly of the mouse.PLoS Biol2009
18423524Linkage disequilibrium between STRPs and SNPs across the human genome.Am J Hum Genet2008
17208932Searching the genomes of inbred mouse strains for incompatibilities that reproductively isolate their wild relatives.J Hered2007
17697381Validation of rice genome sequence by optical mapping.BMC Genomics2007
17277361Prospects for association mapping in classical inbred mouse strains.Genetics2007
16151144Whole-genome shotgun optical mapping of Rhodospirillum rubrum.Appl Environ Microbiol2005
15516592Single-molecule approach to bacterial genomic comparisons via optical mapping.J Bacteriol2004
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Collaborators

Audrey P Gasch
University of Wisconsin-Madison
Co-authored papers 10
David C Schwartz
University of Wisconsin-Madison
Co-authored papers 9
Shiguo Zhou
Sage Science Inc.
Co-authored papers 9
Steve Goldstein
University of Wisconsin-Madison
Co-authored papers 6
Rod Runnheim
Co-authored papers 4
Dan Forrest
Co-authored papers 4
Konstantinos Potamousis
University of Wisconsin-Madison
Co-authored papers 4
Christopher Churas (CM4AI)
University of California San Diego
Co-authored papers 4
Michael Bechner
University of Wisconsin-Madison
Co-authored papers 4
Yaoping Zhang
DOE Great Lakes Bioenergy Research Center, University of Wisconsin-Madison
Co-authored papers 4
Robert Landick
University of Wisconsin-Madison
Co-authored papers 3
Louise Pape
University of Wisconsin-Madison
Co-authored papers 2
Timothy J Donohue
University of Wisconsin
Co-authored papers 2
Evan E Eichler
University of Washington
Co-authored papers 1
Xingzhi Song
The University of Texas MD Anderson Cancer Center
Co-authored papers 1
Michael DiCuccio
National Center for Biotechnology Information, National Institutes of Health
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Deanna M Church
Present address: Inscripta Inc.
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Brian Teague
Massachusetts Institute of Technology
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Zo?? Birtle
University of Oxford South Parks Road
Co-authored papers 1
Sante Gnerre
Co-authored papers 1
Ana C Marques
University of Lausanne
Co-authored papers 1
Jun Wang
Zhongnan Hospital of Wuhan University
Co-authored papers 1
Anthony Gitter
University of Wisconsin
Co-authored papers 1
Benedict Paten
UC Santa Cruz Genomics Institute, University of California
Co-authored papers 1
Jian Ma
Co-authored papers 1
Susan Reslewic
University of Wisconsin-Madison
Co-authored papers 1
Peter A Meric
University of Sydney
Co-authored papers 1
Adam M Phillippy
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 1
Erika Kvikstad
University of Oxford
Co-authored papers 1
Jun Wei
University of Arizona
Co-authored papers 1
Release 1.2