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Author Details

Antonio Fernandez-Guerra
Lundbeck Foundation GeoGenetics Centre, GLOBE Institute, University of Copenhagen
2006
39
18
PMIDPaper TitleJournal TitlePublished Year
37293035Microbes with higher metabolic independence are enriched in human gut microbiomes under stress.bioRxiv2023
37598259Inter-comparison of marine microbiome sampling protocols.ISME Commun2023
37828003Genomic adaptation of giant viruses in polar oceans.Nat Commun2023
37076623Mirusviruses link herpesviruses to giant viruses.Nature2023
35296866Author Correction: Late Quaternary dynamics of Arctic biota from ancient environmental genomics.Nature2022
35356891Unifying the known and unknown microbial coding sequence space.Elife2022
36414628Renewal of planktonic foraminifera diversity after the Cretaceous Paleogene mass extinction by benthic colonizers.Nat Commun2022
36450908Reply to: When did mammoths go extinct?Nature2022
36163291Author Correction: Late Quaternary dynamics of Arctic biota from ancient environmental genomics.Nature2022
35920817Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems.Elife2022
34671161Late Quaternary dynamics of Arctic biota from ancient environmental genomics.Nature2021
34904945Secondary metabolite biosynthetic diversity in Arctic Ocean metagenomes.Microb Genom2021
32451471Verrucomicrobia use hundreds of enzymes to digest the algal polysaccharide fucoidan.Nat Microbiol2020
31768033A computational framework to explore large-scale biosynthetic diversity.Nat Chem Biol2020
30534987Decoding the ocean's microbiological secrets for marine enzyme biodiscovery.FEMS Microbiol Lett2019
31488068Fast and accurate average genome size and 16S rRNA gene average copy number computation in metagenomic data.BMC Bioinformatics2019
29064479Recurrent patterns of microdiversity in a temperate coastal marine environment.ISME J2018
30300505Molecular recognition of the beta-glucans laminarin and pustulan by a SusD-like glycan-binding protein of a marine Bacteroidetes.FEBS J2018
29182315Determinants and Prediction of Esterase Substrate Promiscuity Patterns.ACS Chem Biol2018
29255014Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics.Proc Natl Acad Sci U S A2018
27801907Geographic distribution at subspecies resolution level: closely related Rhodopirellula species in European coastal sediments.ISME J2017
28625778Analysis of phytoplankton assemblage structure in the Mediterranean Sea based on high-throughput sequencing of partial 18S rRNA sequences.Mar Genomics2017
27047614MyOSD 2014: Evaluating Oceanographic Measurements Contributed by Citizen Scientists in Support of Ocean Sampling Day.J Microbiol Biol Educ2016
27932907Optimized R functions for analysis of ecological community data using the R virtual laboratory (RvLab).Biodivers Data J2016
27765035BioVeL: a virtual laboratory for data analysis and modelling in biodiversity science and ecology.BMC Ecol2016
27065959Comparative Genomic Analysis Reveals a Diverse Repertoire of Genes Involved in Prokaryote-Eukaryote Interactions within the Pseudovibrio Genus.Front Microbiol2016
26097697The ocean sampling day consortium.Gigascience2015
25513851Characterisation of non-autoinducing tropodithietic Acid (TDA) production from marine sponge Pseudovibrio species.Mar Drugs2014
23596327Pheromone evolution, reproductive genes, and comparative transcriptomics in mediterranean earthworms (annelida, oligochaeta, hormogastridae).Mol Biol Evol2013
22121910Exploration of community traits as ecological markers in microbial metagenomes.Mol Ecol2012
23056629Habitat-associated phylogenetic community patterns of microbial ammonia oxidizers.PLoS One2012
22839777Patterns and architecture of genomic islands in marine bacteria.BMC Genomics2012
21395891Phylogenetic ecology of widespread uncultured clades of the Kingdom Euryarchaeota.Mol Ecol2011
22003006Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. strain MED134.Appl Environ Microbiol2011
21864693A close relationship between primary nucleotides sequence structure and the composition of functional genes in the genome of prokaryotes.Mol Phylogenet Evol2011
20950425T-RFPred: a nucleotide sequence size prediction tool for microbial community description based on terminal-restriction fragment length polymorphism chromatograms.BMC Microbiol2010
18552178Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria).Proc Natl Acad Sci U S A2008
17095691The genome of the sea urchin Strongylocentrotus purpuratus.Science2006
17078944The genomic repertoire for cell cycle control and DNA metabolism in S. purpuratus.Dev Biol2006
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Collaborators

Frank Oliver Glöckner
Co-authored papers 8
Richard Durbin
University of Cambridge
Co-authored papers 4
Renzo Kottmann
Max Planck Institute for Marine Microbiology
Co-authored papers 4
France Denoeud
Co-authored papers 4
Pier Luigi Buttigieg
Alfred Wegener Institute
Co-authored papers 3
Cynthia A Bradham
Boston University
Co-authored papers 2
Anne-Marie Genevi??re
Sorbonne Universite, CNRS
Co-authored papers 2
Patrick Cormier
CNRS, Sorbonne Universite
Co-authored papers 2
Anthony J Robertson
Present address: King Abdullah University of Science and Technology
Co-authored papers 2
William F Marzluff
University of North Carolina at Chapel Hill
Co-authored papers 2
Bertrand Cosson
Universite Paris Cite, CNRS
Co-authored papers 2
Nikki Adams
California Polytechnic State University
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University of Maine
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National Center for Biotechnology Information, National Institutes of Health
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Eastern Michigan University.
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DOE Joint Genome Institute, Lawrence Berkeley National Laboratory
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Charles A Whittaker
Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology
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Christopher E Killian
University of California berkeley
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Glen Humphrey
National Institute of Child Health and Human Development
Co-authored papers 1
Shannon Dugan
Baylor College of Medicine
Co-authored papers 1
Angela Jolivet
Co-authored papers 1
Lora R Lewis
Baylor College of Medicine
Co-authored papers 1
David Parker
Co-authored papers 1
Melissa J Landrum
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 1
John J Stegeman
Woods Hole Oceanographic Institution
Co-authored papers 1
Erin L Allgood
Co-authored papers 1
Sham V Nair
Macquarie University
Co-authored papers 1
Release 1.2