Author details

Full Name

Benjamin L King

Affiliation

ORCID

Career Start Year

1993

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
35960154	medna-metadata: an open-source data management system for tracking environmental DNA samples and metadata.	Bioinformatics	2022
35774532	Retraction Notice to: Modulation of TNFa Activity by the microRNA Let-7 Coordinates Zebrafish Heart Regeneration.	iScience	2022
35774531	Retraction Notice to: Modulation of TNFÎ± Activity by the microRNA Let-7 Coordinates Zebrafish Heart Regeneration.	iScience	2022
34603492	Meta-analysis: Congruence of genomic and phenotypic differentiation across diverse natural study systems.	Evolutionary Applications	2021
34025644	Modeling Virus-Induced Inflammation in Zebrafish: A Balance Between Infection Control and Excessive Inflammation.	Front Immunol	2021
32746894	Chronic cortisol exposure in early development leads to neuroendocrine dysregulation in adulthood.	BMC Res Notes	2020
31307002	Modulation of TNFÎ± Activity by the microRNA Let-7 Coordinates Zebrafish Heart Regeneration.	iScience	2019
30476744	Profiling microRNA expression in Atlantic killifish (Fundulus heteroclitus) gill and responses to arsenic and hyperosmotic stress.	Aquat Toxicol	2019
31026665	Modulation of TNFÎ± Activity by the microRNA Let-7 Coordinates Zebrafish Heart Regeneration.	iScience	2019
31207231	Quantitative Trait Locus and Integrative Genomics Revealed Candidate Modifier Genes for Ectopic Mineralization in Mouse Models of Pseudoxanthoma Elasticum.	J Invest Dermatol	2019
29641231	A role for the CXCR4-CXCL12 axis in the little skate, Leucoraja erinacea.	American Journal of Physiology - Regulatory Integrative and Comparative Physiology	2018
29872545	RegenDbase: a comparative database of noncoding RNA regulation of tissue regeneration circuits across multiple taxa.	npj Regenerative Medicine	2018
27925505	Prioritizing studies on regeneration in nontraditional model organisms.	Regenerative Medicine	2017
27651457	The Comparative Toxicogenomics Database: update 2017.	Nucleic Acids Res	2017
28201664	The landscape of extreme genomic variation in the highly adaptable Atlantic killifish.	Genome Biol Evol	2017
27689529	Global gene profiling of aging lungs in Atp8b1 mutant mice.	Aging	2016
27111894	Abnormal Osmotic Avoidance Behavior in C. elegans Is Associated with Increased Hypertonic Stress Resistance and Improved Proteostasis.	PLoS ONE	2016
26846883	Comparative transcriptomic profiling of hydrogen peroxide signaling networks in zebrafish and human keratinocytes: Implications toward conservation, migration and wound healing.	Scientific Reports	2016
26733575	The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference.	Genome Biol Evol	2016
27171405	Generating Gene Ontology-Disease Inferences to Explore Mechanisms of Human Disease at the Comparative Toxicogenomics Database.	PLoS One	2016
27170236	Advancing Exposure Science through Chemical Data Curation and Integration in the Comparative Toxicogenomics Database.	Environ Health Perspect	2016
27355827	A Conserved MicroRNA Regulatory Circuit Is Differentially Controlled during Limb/Appendage Regeneration.	PLoS ONE	2016
27444789	Cortisol-treated zebrafish embryos develop into pro-inflammatory adults with aberrant immune gene regulation.	Biol Open	2016
26687710	Calcium activated Kâº channels in the electroreceptor of the skate confirmed by cloning. Details of subunits and splicing.	Gene	2016
26486088	Detection of canonical A-to-G editing events at 3' UTRs and microRNA target sites in human lungs using next-generation sequencing.	Oncotarget	2015
25326323	The Comparative Toxicogenomics Database's 10th year anniversary: update 2015.	Nucleic Acids Res	2015
26473382	A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome.	Annu Rev Genet	2015
26125680	A Fluorescence-Based Assay for Proteinuria Screening in Larval Zebrafish (Danio rerio).		2015
26124444	Gene Expression Changes Associated With the Developmental Plasticity of Sea Urchin Larvae in Response to Food Availability.	Biol Bull	2015
24798503	Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles.	Evol Dev	2014
25309735	SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes.	F1000Res	2014
25158801	Natural selection canalizes expression variation of environmentally induced plasticity-enabling genes.	Mol Biol Evol	2014
23703796	MicroRNAs support the monophyly of enteropneust hemichordates.	J Exp Zool B Mol Dev Evol	2013
23014334	Endogenous retinoids in the pathogenesis of alopecia areata.	J Invest Dermatol	2013
23913097	miRNAs: small genes with big potential in metazoan phylogenetics.	Mol Biol Evol	2013
24288140	A CTD-Pfizer collaboration: manual curation of 88,000 scientific articles text mined for drug-disease and drug-phenotype interactions.	Database (Oxford)	2013
23093600	The Comparative Toxicogenomics Database: update 2013.	Nucleic Acids Res	2013
23262277	In silico characterization of the insect diapause-associated protein couch potato (CPO) in Calanus finmarchicus (Crustacea: Copepoda).		2013
21775315	MicroRNAs support a turtle + lizard clade.	Biol Lett	2012
22434832	Community annotation and bioinformatics workforce development in concert--Little Skate Genome Annotation Workshops and Jamborees.	Database (Oxford)	2012
22693585	The AlstrÃ¶m syndrome protein, ALMS1, interacts with Î±-actinin and components of the endosome recycling pathway.	PLoS ONE	2012
22563380	Clusters of ancestrally related genes that show paralogy in whole or in part are a major feature of the genomes of humans and other species.	PLoS ONE	2012
23144783	Ranking transitive chemical-disease inferences using local network topology in the comparative toxicogenomics database.	PLoS One	2012
22203040	CD2AP regulates SUMOylation of CIN85 in podocytes.	Mol Cell Biol	2012
21864367	Datgan, a reusable software system for facile interrogation and visualization of complex transcription profiling data.	BMC Genomics	2011
21383504	Molecular clustering identifies complement and endothelin induction as early events in a mouse model of glaucoma.	J Clin Invest	2011
20864448	The Comparative Toxicogenomics Database: update 2011.	Nucleic Acids Res	2011
20956523	Prefoldin 5 is required for normal sensory and neuronal development in a murine model.	Journal of Biological Chemistry	2011
22174244	A natural deletion of the HoxC cluster in elasmobranch fishes.	Science	2011
20657597	Widespread genomic breaks generated by activation-induced cytidine deaminase are prevented by homologous recombination.	Nature Immunology	2010