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Author Details

Ibrahim Burak Ozyurt
SciCrunch Inc.
2006
22
14
PMIDPaper TitleJournal TitlePublished Year
35759334Establishing Institutional Scores With the Rigor and Transparency Index: Large-scale Analysis of Scientific Reporting Quality.J Med Internet Res2022
35759334Establishing Institutional Scores With the Rigor and Transparency Index: Large-scale Analysis of Scientific Reporting Quality.J Med Internet Res2022
34043624Antibody Watch: Text mining antibody specificity from the literature.PLoS Comput Biol2021
34043624Antibody Watch: Text mining antibody specificity from the literature.PLoS Comput Biol2021
33196023The Rigor and Transparency Index Quality Metric for Assessing Biological and Medical Science Methods.iScience2020
31925435Bio-AnswerFinder: a system to find answers to questions from biomedical texts.Database (Oxford)2020
33196023The Rigor and Transparency Index Quality Metric for Assessing Biological and Medical Science Methods.iScience2020
31925435Bio-AnswerFinder: a system to find answers to questions from biomedical texts.Database (Oxford)2020
30693867Incidences of problematic cell lines are lower in papers that use RRIDs to identify cell lines.Elife2019
30693867Incidences of problematic cell lines are lower in papers that use RRIDs to identify cell lines.Elife2019
29346583DataMed - an open source discovery index for finding biomedical datasets.J Am Med Inform Assoc2018
30576493Foundry: a message-oriented, horizontally scalable ETL system for scientific data integration and enhancement.Database (Oxford)2018
29346583DataMed - an open source discovery index for finding biomedical datasets.J Am Med Inform Assoc2018
30576493Foundry: a message-oriented, horizontally scalable ETL system for scientific data integration and enhancement.Database (Oxford)2018
28585923DATS, the data tag suite to enable discoverability of datasets.Sci Data2017
28585923DATS, the data tag suite to enable discoverability of datasets.Sci Data2017
26032887The Cerebral Blood Flow Biomedical Informatics Research Network (CBFBIRN) data repository.Neuroimage2016
26730820Resource Disambiguator for the Web: Extracting Biomedical Resources and Their Citations from the Scientific Literature.PLoS One2016
26364863The Function Biomedical Informatics Research Network Data Repository.Neuroimage2016
26032887The Cerebral Blood Flow Biomedical Informatics Research Network (CBFBIRN) data repository.Neuroimage2016
26364863The Function Biomedical Informatics Research Network Data Repository.Neuroimage2016
26730820Resource Disambiguator for the Web: Extracting Biomedical Resources and Their Citations from the Scientific Literature.PLoS One2016
24151465The Cerebral Blood Flow Biomedical Informatics Research Network (CBFBIRN) database and analysis pipeline for arterial spin labeling MRI data.Front Neuroinform2013
24151465The Cerebral Blood Flow Biomedical Informatics Research Network (CBFBIRN) database and analysis pipeline for arterial spin labeling MRI data.Front Neuroinform2013
22314879Function biomedical informatics research network recommendations for prospective multicenter functional MRI studies.J Magn Reson Imaging2012
22868678Automatic identification and classification of noun argument structures in biomedical literature.IEEE/ACM Trans Comput Biol Bioinform2012
22314879Function biomedical informatics research network recommendations for prospective multicenter functional MRI studies.J Magn Reson Imaging2012
22868678Automatic identification and classification of noun argument structures in biomedical literature.IEEE/ACM Trans Comput Biol Bioinform2012
20932915Multisite reliability of cognitive BOLD data.Neuroimage2011
20932915Multisite reliability of cognitive BOLD data.Neuroimage2011
20567938Federated web-accessible clinical data management within an extensible neuroimaging database.Neuroinformatics2010
20567938Federated web-accessible clinical data management within an extensible neuroimaging database.Neuroinformatics2010
19023127Brain-performance correlates of working memory retrieval in schizophrenia: a cognitive modeling approach.Schizophr Bull2009
19623491Knowledge discovery via machine learning for neurodegenerative disease researchers.Methods Mol Biol2009
19023127Brain-performance correlates of working memory retrieval in schizophrenia: a cognitive modeling approach.Schizophr Bull2009
19826494Derived Data Storage and Exchange Workflow for Large-Scale Neuroimaging Analyses on the BIRN Grid.Front Neuroinform2009
19623491Knowledge discovery via machine learning for neurodegenerative disease researchers.Methods Mol Biol2009
19826494Derived Data Storage and Exchange Workflow for Large-Scale Neuroimaging Analyses on the BIRN Grid.Front Neuroinform2009
18348946A national human neuroimaging collaboratory enabled by the Biomedical Informatics Research Network (BIRN).IEEE Trans Inf Technol Biomed2008
18348946A national human neuroimaging collaboratory enabled by the Biomedical Informatics Research Network (BIRN).IEEE Trans Inf Technol Biomed2008
17295313A technique for the deidentification of structural brain MR images.Hum Brain Mapp2007
17295313A technique for the deidentification of structural brain MR images.Hum Brain Mapp2007
15986433Quantitative evaluation of automated skull-stripping methods applied to contemporary and legacy images: effects of diagnosis, bias correction, and slice location.Hum Brain Mapp2006
15986433Quantitative evaluation of automated skull-stripping methods applied to contemporary and legacy images: effects of diagnosis, bias correction, and slice location.Hum Brain Mapp2006
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Collaborators

Jeffrey S Grethe
university of california san diego
Co-authored papers 10
Anita Bandrowski
university of california san diego
Co-authored papers 6
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Co-authored papers 5
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Change Your Brain Change Your Life Foundation
Co-authored papers 5
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Georgia State University
Co-authored papers 4
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University of California San Diego
Co-authored papers 4
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University of California Irvine
Co-authored papers 4
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university of california san diego
Co-authored papers 4
Douglas N Greve
Co-authored papers 4
Henry J Bockholt
Co-authored papers 4
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Georgia Institute of Technology, Emory University
Co-authored papers 3
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Mallinckrodt Institute of Radiology, Washington University School of Medicine
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Lucila Ohno-Machado
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Alejandra Gonzalez-Beltran
Oxford e-Research Centre, University of Oxford
Co-authored papers 2
Randy Notestine
Co-authored papers 2
Theo G M van Erp
University of California Irvine
Co-authored papers 2
Anupama E Gururaj
National Institute of Allergy and Infectious Disease, National Institutes of Health
Co-authored papers 2
Philippe Rocca-Serra
University of Oxford
Co-authored papers 2
Susanna-Assunta Sansone
Oxford e-Research Centre, University of Oxford
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Adrian Preda
University of California Irvine
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Nansu Zong
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Hua Xu
Yale University
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Martijn Roelandse
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Release 1.2