Author details

Full Name

Shakti Gupta

Affiliation

ORCID

Career Start Year

2003

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36732946	Ablation of Adar1 in myeloid cells imprints a global antiviral state in the lung and heightens early immunity against SARS-CoV-2.	Cell Rep	2023
37213689	Temporal transcriptional control of neural induction in human induced pluripotent stem cells.	Front Mol Neurosci	2023
36577930	SREBP signaling is essential for effective B cell responses.	Nat Immunol	2023
36993235	Modeling transcriptional regulation of the cell cycle using a novel cybernetic-inspired approach.	bioRxiv	2023
33594366	Adjuvanting a subunit SARS-CoV-2 nanoparticle vaccine to induce protective immunity in non-human primates.	bioRxiv	2021
34174187	The single-cell epigenomic and transcriptional landscape of immunity to influenza vaccination.	Cell	2021
33468662	Longitudinal shear stress response in human endothelial cells to atheroprone and atheroprotective conditions.	Proc Natl Acad Sci U S A	2021
33873199	Adjuvanting a subunit COVID-19 vaccine to induce protective immunity.	Nature	2021
32393800	T cell-inducing vaccine durably prevents mucosal SHIV infection even with lower neutralizing antibody titers.	Nat Med	2020
29348663	Enhancer-associated long non-coding RNA LEENE regulates endothelial nitric oxide synthase and endothelial function.	Nat Commun	2018
28794002	KrÃ¼ppel-Like Factor 4 Regulation of Cholesterol-25-Hydroxylase and Liver X Receptor Mitigates Atherosclerosis Susceptibility.	Circulation	2017
28973892	Systems biology analysis of longitudinal functional response of endothelial cells to shear stress.	Proc Natl Acad Sci U S A	2017
27511733	Systems Analysis of the Complement-Induced Priming Phase of Liver Regeneration.	J Immunol	2016
25961929	Identification of therapeutic targets for glioblastoma by network analysis.	Oncogene	2016
27063350	Computational Modeling of Competitive Metabolism between Ï¿3- and Ï¿6-Polyunsaturated Fatty Acids in Inflammatory Macrophages.	J Phys Chem B	2016
26002934	Serum microRNAs explain discordance of non-alcoholic fatty liver disease in monozygotic and dizygotic twins: a prospective study.	Gut	2016
26682988	Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures.	Immunity	2015
25598080	Biomarkers of NAFLD progression: a lipidomics approach to an epidemic.	J Lipid Res	2015
24559999	Modeling of eicosanoid fluxes reveals functional coupling between cyclooxygenases and terminal synthases.	Biophys J	2014
24569163	Statistical insights into major human muscular diseases.	Hum Mol Genet	2014
23981351	A combined omics study on activated macrophages--enhanced role of STATs in apoptosis, immunity and lipid metabolism.	Bioinformatics	2013
23776196	Analysis of inflammatory and lipid metabolic networks across RAW264.7 and thioglycolate-elicited macrophages.	J Lipid Res	2013
22184721	A complement-IL-4 regulatory circuit controls liver regeneration.	J Immunol	2012
22917187	B-cell ligand processing pathways detected by large-scale comparative analysis.	Genomics Proteomics Bioinformatics	2012
21939287	Bioinformatics and systems biology of the lipidome.	Chem Rev	2011
21303545	Integration of lipidomics and transcriptomics data towards a systems biology model of sphingolipid metabolism.	BMC Syst Biol	2011
20126526	Identification of crosstalk between phosphoprotein signaling pathways in RAW 264.7 macrophage cells.	PLoS Comput Biol	2010
20923771	A mouse macrophage lipidome.	J Biol Chem	2010
19486676	An integrated model of eicosanoid metabolism and signaling based on lipidomics flux analysis.	Biophys J	2009
17300722	Inclusion of the glucocorticoid receptor in a hypothalamic pituitary adrenal axis model reveals bistability.	Theoretical Biology and Medical Modelling	2007
15588630	The dynamics of single-substrate continuous cultures: the role of ribosomes.	Journal of Theoretical Biology	2005
12732477	The dynamics of single-substrate continuous cultures: the role of transport enzymes.	Journal of Theoretical Biology	2003