Author details

Full Name

Mina John

Affiliation

ORCID

Career Start Year

1998

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
34994053	QuantiFERON-cytomegalovirus to predict clinically significant cytomegalovirus infection after allogeneic hematopoietic stem cell transplantation.	Transplant Infectious Disease	2022
35570134	A Novel Targeted Amplicon Next-Generation Sequencing Gene Panel for the Diagnosis of Common Variable Immunodeficiency Has a High DiagnosticÂ Yield: Results from the Perth CVID Cohort Study.	Journal of Molecular Diagnostics	2022
36525463	Adaptation to HLA-associated immune pressure over the course of HIV infection and in circulating HIV-1 strains.		2022
34541432	Generation of a Novel SARS-CoV-2 Sub-genomic RNA Due to the R203K/G204R Variant in Nucleocapsid: Homologous Recombination has Potential to Change SARS-CoV-2 at Both Protein and RNA Level.	Pathog Immun	2021
33880475	Generation of a novel SARS-CoV-2 sub-genomic RNA due to the R203K/G204R variant in nucleocapsid: homologous recombination has potential to change SARS-CoV-2 at both protein and RNA level.	bioRxiv	2021
33430600	Calculated globulin as a screening tool for hypogammaglobulinaemia or paraproteins in hospitalized patients.	Annals of Clinical Biochemistry	2021
34764960	Cross-Reactivity to Mutated Viral Immune Targets Can Influence CD8 T Cell Functionality: An Alternative Viral Adaptation Strategy.	Frontiers in Immunology	2021
32175088	Chorea associated with persistent low-level viremia in a patient living with HIV: a case report.	Journal of Virus Eradication	2020
31102700	Virus-specific T-cell clonotypes might contribute to drug hypersensitivity reactions through heterologous immunity.	Journal of Allergy and Clinical Immunology	2019
31821379	Deep sequence analysis of HIV adaptation following vertical transmission reveals the impact of immune pressure on the evolution of HIV.	PLoS Pathogens	2019
30557620	IgE blockade in autoimmunity: Omalizumab induced remission of bullous pemphigoid.	Clinical Immunology	2019
30925534	Clinical and evolutionary consequences of HIV adaptation to HLA: implications for vaccine and cure.		2019
31230817	Autoantibodies in interstitial lung diseases.	Pathology	2019
31167698	A national study of the clinical management of HIV-positive women in Australia: what are the successes and where are the gaps?	Sexual Health	2019
31125485	Drug-induced alloreactivity: A new paradigm for allorecognition.	American Journal of Transplantation	2019
29740042	Evidence of CD4<sup>+</sup> T cell-mediated immune pressure on the Hepatitis C virus genome.	Sci Rep	2018
29945729	Analysis of the QuantiFERON-CMV assay, CMV viraemia and antiviral treatment following solid organ transplantation in Western Australia.	Pathology	2018
29093100	Weaker HLA Footprints on HIV in the Unique and Highly Genetically Admixed Host Population of Mexico.	Journal of Virology	2018
29167337	Differential Immunodominance Hierarchy of CD8<sup>+</sup> T-Cell Responses in HLA-B27:05- and -B27:02-Mediated Control of HIV-1 Infection.	J Virol	2018
28650381	Potential for immune-driven viral polymorphisms to compromise antiretroviral-based preexposure prophylaxis for prevention of HIV-1 infection.	AIDS	2017
28372798	Stimulation of HIV-specific T cell clonotypes using allogeneic HLA.	Cellular Immunology	2017
27853144	HLA Class I and II alleles, heterozygosity and HLA-KIR interactions are associated with rates of genital HSV shedding and lesions.	Genes Immun	2016
27183217	Impact of pre-adapted HIV transmission.	Nat Med	2016
26530340	Longitudinal Trends in Western Australian HIV-1 Sequence Diversity and Viral Transmission Networks and Their Influence on Clinical Parameters: 2000-2014.	AIDS Research and Human Retroviruses	2016
26107956	Anti-hepatitis C virus T-cell immunity in the context of multiple exposures to the virus.	PLoS ONE	2015
24522911	Host-specific adaptation of HIV-1 subtype B in the Japanese population.	Journal of Virology	2014
25352836	Influence of HIV and HCV on T cell antigen presentation and challenges in the development of vaccines.	Frontiers in Microbiology	2014
24501417	Differential escape patterns within the dominant HLA-B*57:03-restricted HIV Gag epitope reflect distinct clade-specific functional constraints.	J Virol	2014
23559252	Influence of HLA-C expression level on HIV control.	Science	2013
24070155	Diagnostic dilemmas in celiac disease.	Expert Review of Gastroenterology and Hepatology	2013
24023257	Molecular mechanisms of HIV type 1 prophylaxis failure revealed by single-genome sequencing.	Journal of Infectious Diseases	2013
24171102	A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control.	Elife	2013
23276808	HIV escape mutations occur preferentially at HLA-binding sites of CD8 T-cell epitopes.	AIDS	2013
23236061	Distinct HIV-1 escape patterns selected by cytotoxic T cells with identical epitope specificity.	Journal of Virology	2013
21577229	High-avidity, high-IFNÎ³-producing CD8 T-cell responses following immune selection during HIV-1 infection.	Immunology and Cell Biology	2012
22474021	High frequency of HIV mutations associated with HLA-C suggests enhanced HLA-C-restricted CTL selective pressure associated with an AIDS-protective polymorphism.	Journal of Immunology	2012
22498169	Use of alcohol, nicotine and other drugs in the Western Australian HIV Cohort study.	Sexual Health	2012
22496233	Uncommon pathways of immune escape attenuate HIV-1 integrase replication capacity.	J Virol	2012
22950904	The impact of visa status and Medicare eligibility on people diagnosed with HIV in Western Australia: a qualitative report.	Sexual Health	2012
23055555	Correlates of protective cellular immunity revealed by analysis of population-level immune escape pathways in HIV-1.	J Virol	2012
21821798	Translation of HLA-HIV associations to the cellular level: HIV adapts to inflate CD8 T cell responses against Nef and HLA-adapted variant epitopes.	J Immunol	2011
21084470	Mapping the landscape of host-pathogen coevolution: HLA class I binding and its relationship with evolutionary conservation in human and viral proteins.	J Virol	2011
21347433	Constrained pattern of viral evolution in acute and early HCV infection limits viral plasticity.	PLoS ONE	2011
21473715	Biomarkers of natural and vaccine immunity against HIV.	Biomarkers in Medicine	2011
21246583	Effect of immune pressure on hepatitis C virus evolution: insights from a single-source outbreak.	Hepatology	2011
21670313	Multilayered defense in HLA-B51-associated HIV viral control.	J Immunol	2011
21562042	Extensive HLA-driven viral diversity following a narrow-source HIV-1 outbreak in rural China.	Blood	2011
20231689	Adaptive interactions between HLA and HIV-1: highly divergent selection imposed by HLA class I molecules with common supertype motifs.	J Immunol	2010
21051598	The major genetic determinants of HIV-1 control affect HLA class I peptide presentation.	Science	2010
20619380	Exploiting knowledge of immune selection in HIV-1 to detect HIV-specific CD8 T-cell responses.	Vaccine	2010