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Author Details

Pascale Gaudet
University of Geneva
1996
84
30
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
35295568Missing Links Between Gene Function and Physiology in Genomics.Front Physiol2022
35295568Missing Links Between Gene Function and Physiology in Genomics.Front Physiol2022
34850135DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation.Nucleic Acids Res2022
34850135DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation.Nucleic Acids Res2022
32637990The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST).Bioinformatics2021
32637990The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST).Bioinformatics2021
34461313Gene Ontology representation for transcription factor functions.Biochim Biophys Acta Gene Regul Mech2021
34673265A GO catalogue of human DNA-binding transcription factors.Biochim Biophys Acta Gene Regul Mech2021
34710644Formalization of gene regulation knowledge using ontologies and gene ontology causal activity models.Biochim Biophys Acta Gene Regul Mech2021
34710644Formalization of gene regulation knowledge using ontologies and gene ontology causal activity models.Biochim Biophys Acta Gene Regul Mech2021
34673265A GO catalogue of human DNA-binding transcription factors.Biochim Biophys Acta Gene Regul Mech2021
34461313Gene Ontology representation for transcription factor functions.Biochim Biophys Acta Gene Regul Mech2021
32875947Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns.Open Biol2020
31724716The neXtProt knowledgebase in 2020: data, tools and usability improvements.Nucleic Acids Res2020
31985787The Feature-Viewer: a visualization tool for positional annotations on a sequence.Bioinformatics2020
32875947Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns.Open Biol2020
31724716The neXtProt knowledgebase in 2020: data, tools and usability improvements.Nucleic Acids Res2020
31985787The Feature-Viewer: a visualization tool for positional annotations on a sequence.Bioinformatics2020
30407590ECO, the Evidence & Conclusion Ontology: community standard for evidence information.Nucleic Acids Res2019
30407590ECO, the Evidence & Conclusion Ontology: community standard for evidence information.Nucleic Acids Res2019
31171447SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse.Neuron2019
31548717Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems.Nat Genet2019
31548717Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems.Nat Genet2019
31171447SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse.Neuron2019
29494549Kinases and Cancer.Cancers (Basel)2018
30576492Accelerating annotation of articles via automated approaches: evaluation of the neXtA5 curation-support tool by neXtProt.Database (Oxford)2018
29996917A new bioinformatics tool to help assess the significance of BRCA1 variants.Hum Genomics2018
30329035Overview of the BioCreative VI text-mining services for Kinome Curation Track.Database (Oxford)2018
29695735Integrative annotation and knowledge discovery of kinase post-translational modifications and cancer-associated mutations through federated protein ontologies and resources.Sci Rep2018
29494549Kinases and Cancer.Cancers (Basel)2018
29996917A new bioinformatics tool to help assess the significance of BRCA1 variants.Hum Genomics2018
30576492Accelerating annotation of articles via automated approaches: evaluation of the neXtA5 curation-support tool by neXtProt.Database (Oxford)2018
30329035Overview of the BioCreative VI text-mining services for Kinome Curation Track.Database (Oxford)2018
29695735Integrative annotation and knowledge discovery of kinase post-translational modifications and cancer-associated mutations through federated protein ontologies and resources.Sci Rep2018
27812934Best Practices in Manual Annotation with the Gene Ontology.Methods Mol Biol2017
29220432Triage by ranking to support the curation of protein interactions.Database (Oxford)2017
27899619The neXtProt knowledgebase on human proteins: 2017 update.Nucleic Acids Res2017
28168870Annotation of functional impact of voltage-gated sodium channel mutations.Hum Mutat2017
27812944Gene Ontology: Pitfalls, Biases, and Remedies.Methods Mol Biol2017
27812933Primer on the Gene Ontology.Methods Mol Biol2017
27812934Best Practices in Manual Annotation with the Gene Ontology.Methods Mol Biol2017
28168870Annotation of functional impact of voltage-gated sodium channel mutations.Hum Mutat2017
29220432Triage by ranking to support the curation of protein interactions.Database (Oxford)2017
27899619The neXtProt knowledgebase on human proteins: 2017 update.Nucleic Acids Res2017
27812944Gene Ontology: Pitfalls, Biases, and Remedies.Methods Mol Biol2017
27812933Primer on the Gene Ontology.Methods Mol Biol2017
27055825ICEPO: the ion channel electrophysiology ontology.Database (Oxford)2016
27055825ICEPO: the ion channel electrophysiology ontology.Database (Oxford)2016
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Collaborators

Center for Genetic Medicine, Feinberg School of Medicine, Northwestern University
Co-authored papers 26
Center for Genetic Medicine, Northwestern University.
Co-authored papers 24
University of Geneva
Co-authored papers 17
Lawrence Berkeley National Laboratory
Co-authored papers 9
Stanford University
Co-authored papers 8
University College London, Institute for Cardiovascular Science
Co-authored papers 8
International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences
Co-authored papers 8
University of Southern California
Co-authored papers 8
University of Maryland School of Medicine, Institute for Genome Sciences
Co-authored papers 7
SIB Swiss Institute of Bioinformatics and University of Geneva
Co-authored papers 7
EMBL's European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 7
carnegie mellon university
Co-authored papers 6
carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4
Co-authored papers 6
Co-authored papers 6
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 6
Duke Clinical Research Institute, Duke University
Co-authored papers 6
University of Southern California
Co-authored papers 6
Oxford e-Research Centre, University of Oxford
Co-authored papers 6
Biodiversity Institute, University of Oxford
Co-authored papers 5
European Molecular Biology Laboratory- European Bioinformatics Institute
Co-authored papers 5
Co-authored papers 5
University of Applied Sciences and Arts of Western Switzerland (HES-SO).
Co-authored papers 5
California Institute of Technology
Co-authored papers 5
University of Oxford
Co-authored papers 5
Co-authored papers 5
University of Geneva
Co-authored papers 5
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
University of Cambridge
Co-authored papers 4
West Bengal University of Animal and Fishery Sciences
Co-authored papers 4
Lawrence Berkeley National Laboratory
Co-authored papers 4